RNA–Protein interactions for RNA: YOL122C

SMF1, Transcript of Divalent metal ion transporter, yeast

Gene SMF1, Length 1,728 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SMF1	YOL122C	APE4	P38821	490 aa		4.37	□□□□□ -1.71
SMF1	YOL122C	SPT8	P38915	602 aa		4.37	□□□□□ -1.71
SMF1	YOL122C	SEC31	P38968	1273 aa	Known RBP	4.37	□□□□□ -1.71
SMF1	YOL122C	ECM10	P39987	644 aa		4.37	□□□□□ -1.71
SMF1	YOL122C	MEP1	P40260	492 aa		4.37	□□□□□ -1.71
SMF1	YOL122C	UTP18	P40362	594 aa	Predicted RBP	4.37	□□□□□ -1.71
SMF1	YOL122C	YJL068C	P40363	299 aa		4.37	□□□□□ -1.71
SMF1	YOL122C	YFR020W	P43600	232 aa		4.37	□□□□□ -1.71
SMF1	YOL122C	LSC1	P53598	329 aa	Known RBP	4.37	□□□□□ -1.71
SMF1	YOL122C	MAK10	Q02197	733 aa		4.37	□□□□□ -1.71
SMF1	YOL122C	BUD22	Q04347	519 aa	Known RBP	4.37	□□□□□ -1.71
SMF1	YOL122C	LUC7	Q07508	261 aa	Predicted RBP	4.37	□□□□□ -1.71
SMF1	YOL122C	RIO1	Q12196	484 aa	Known RBP	4.37	□□□□□ -1.71
SMF1	YOL122C	ISN1	Q99312	450 aa		4.37	□□□□□ -1.71
SMF1	YOL122C	ULS1	Q08562	1619 aa		4.37	□□□□□ -1.71
SMF1	YOL122C	VPS15	P22219	1454 aa		4.36	□□□□□ -1.71
SMF1	YOL122C	RPL7A	P05737	244 aa	Known RBP	4.36	□□□□□ -1.71
SMF1	YOL122C	DFR1	P07807	211 aa	Known RBP RIP-Chip data	4.36	□□□□□ -1.71	not detected
SMF1	YOL122C	SSC1	P0CS90	654 aa	Known RBP	4.36	□□□□□ -1.71
SMF1	YOL122C	NAT1	P12945	854 aa	Known RBP	4.36	□□□□□ -1.71
SMF1	YOL122C	GSH1	P32477	678 aa		4.36	□□□□□ -1.71
SMF1	YOL122C	EMP70	P32802	667 aa		4.36	□□□□□ -1.71
SMF1	YOL122C	MRE11	P32829	692 aa		4.36	□□□□□ -1.71
SMF1	YOL122C	HCS1	P34243	683 aa		4.36	□□□□□ -1.71
SMF1	YOL122C	BMH2	P34730	273 aa	Known RBP	4.36	□□□□□ -1.71
SMF1	YOL122C	GCS1	P35197	352 aa		4.36	□□□□□ -1.71
SMF1	YOL122C	KES1	P35844	434 aa	Known RBP	4.36	□□□□□ -1.71
SMF1	YOL122C	ADE17	P38009	592 aa	Known RBP	4.36	□□□□□ -1.71
SMF1	YOL122C	AGP2	P38090	596 aa		4.36	□□□□□ -1.71
SMF1	YOL122C	CHS7	P38843	316 aa		4.36	□□□□□ -1.71
SMF1	YOL122C	AFG3	P39925	761 aa		4.36	□□□□□ -1.71
SMF1	YOL122C	YGR066C	P53242	292 aa		4.36	□□□□□ -1.71
SMF1	YOL122C	COP1	P53622	1201 aa	Known RBP	4.36	□□□□□ -1.71
SMF1	YOL122C	RMT2	Q03305	412 aa		4.36	□□□□□ -1.71
SMF1	YOL122C	GFD1	Q04839	188 aa	Known RBP	4.36	□□□□□ -1.71
SMF1	YOL122C	VPS38	Q05919	439 aa		4.36	□□□□□ -1.71
SMF1	YOL122C	RAD34	Q06665	692 aa		4.36	□□□□□ -1.71
SMF1	YOL122C	ACF2	Q12168	779 aa		4.36	□□□□□ -1.71
SMF1	YOL122C	RPL7B	Q12213	244 aa	Known RBP	4.36	□□□□□ -1.71
SMF1	YOL122C	GAL80	P04387	435 aa		4.35	□□□□□ -1.71
SMF1	YOL122C	GCD2	P12754	651 aa	Predicted RBP	4.35	□□□□□ -1.71
SMF1	YOL122C	APE1	P14904	514 aa		4.35	□□□□□ -1.71
SMF1	YOL122C	PRP16	P15938	1071 aa	Predicted RBP	4.35	□□□□□ -1.71
SMF1	YOL122C	PMA2	P19657	947 aa		4.35	□□□□□ -1.71
SMF1	YOL122C	VMA16	P23968	213 aa		4.35	□□□□□ -1.71
SMF1	YOL122C	SYN8	P31377	255 aa		4.35	□□□□□ -1.71
SMF1	YOL122C	DPH2	P32461	534 aa		4.35	□□□□□ -1.71
SMF1	YOL122C	RIB7	P33312	244 aa		4.35	□□□□□ -1.71
SMF1	YOL122C	STB6	P36085	766 aa		4.35	□□□□□ -1.71
SMF1	YOL122C	VID24	P38263	362 aa		4.35	□□□□□ -1.71
SMF1	YOL122C	TDA10	P42938	290 aa		4.35	□□□□□ -1.71
SMF1	YOL122C	GCD14	P46959	383 aa	Predicted RBP	4.35	□□□□□ -1.71
SMF1	YOL122C	ILM1	P47155	203 aa		4.35	□□□□□ -1.71
SMF1	YOL122C	RBL2	P48606	106 aa	Known RBP	4.35	□□□□□ -1.71
SMF1	YOL122C	YGL242C	P53066	181 aa		4.35	□□□□□ -1.71
SMF1	YOL122C	YGR266W	P53326	701 aa		4.35	□□□□□ -1.71
SMF1	YOL122C	YPR003C	P53394	754 aa		4.35	□□□□□ -1.71
SMF1	YOL122C	SNZ1	Q03148	297 aa		4.35	□□□□□ -1.71
SMF1	YOL122C	ARG7	Q04728	441 aa		4.35	□□□□□ -1.71
SMF1	YOL122C	FAR8	Q05040	523 aa		4.35	□□□□□ -1.71
SMF1	YOL122C	NNT1	Q05874	261 aa		4.35	□□□□□ -1.71
SMF1	YOL122C	CYK3	Q07533	885 aa		4.35	□□□□□ -1.71
SMF1	YOL122C	RTT109	Q07794	436 aa		4.35	□□□□□ -1.71
SMF1	YOL122C	SLK19	Q08581	821 aa	Known RBP	4.35	□□□□□ -1.71
SMF1	YOL122C	YBL111C	Q3E7Y5	667 aa		4.35	□□□□□ -1.71
SMF1	YOL122C	SSK22	P25390	1331 aa	Predicted RBP	4.35	□□□□□ -1.71
SMF1	YOL122C	MRP13	P12686	339 aa		4.35	□□□□□ -1.71
SMF1	YOL122C	ATO2	P32907	282 aa		4.35	□□□□□ -1.71
SMF1	YOL122C	TCD2	P36101	447 aa	Known RBP	4.35	□□□□□ -1.71
SMF1	YOL122C	CST26	P38226	397 aa		4.35	□□□□□ -1.71
SMF1	YOL122C	STN1	P38960	494 aa		4.35	□□□□□ -1.71
SMF1	YOL122C	PHM8	P40025	321 aa		4.35	□□□□□ -1.71
SMF1	YOL122C	STB1	P42845	420 aa		4.35	□□□□□ -1.71
SMF1	YOL122C	GCN20	P43535	752 aa	Known RBP	4.35	□□□□□ -1.71
SMF1	YOL122C	FYV8	P46949	817 aa	Known RBP	4.35	□□□□□ -1.71
SMF1	YOL122C	IRC8	P47046	822 aa		4.35	□□□□□ -1.71
SMF1	YOL122C	PET130	P47065	347 aa		4.35	□□□□□ -1.71
SMF1	YOL122C	IMD4	P50094	524 aa	Known RBP	4.35	□□□□□ -1.71
SMF1	YOL122C	VPS73	P53142	486 aa	Known RBP	4.35	□□□□□ -1.71
SMF1	YOL122C	HOP2	P53187	214 aa		4.35	□□□□□ -1.71
SMF1	YOL122C	HBT1	Q07653	1046 aa	Known RBP	4.35	□□□□□ -1.71
SMF1	YOL122C	ABP140	Q08641	628 aa	Known RBP	4.35	□□□□□ -1.71
SMF1	YOL122C	RLM1	Q12224	676 aa		4.35	□□□□□ -1.71
SMF1	YOL122C	ISA2	Q12425	185 aa		4.35	□□□□□ -1.71
SMF1	YOL122C	HTZ1	Q12692	134 aa	Known RBP	4.35	□□□□□ -1.71
SMF1	YOL122C	YRF1-4	O13559	1382 aa		4.35	□□□□□ -1.71
SMF1	YOL122C	YML133C	Q03099	1374 aa		4.35	□□□□□ -1.71
SMF1	YOL122C	YLL067C	Q07888	1374 aa		4.35	□□□□□ -1.71
SMF1	YOL122C	YLL066C	Q99208	1374 aa		4.35	□□□□□ -1.71
SMF1	YOL122C	HEM1	P09950	548 aa	Predicted RBP	4.34	□□□□□ -1.71
SMF1	YOL122C	PMR1	P13586	950 aa		4.34	□□□□□ -1.71
SMF1	YOL122C	TPM1	P17536	199 aa	Known RBP	4.34	□□□□□ -1.71
SMF1	YOL122C	PTC6	P25646	442 aa		4.34	□□□□□ -1.71
SMF1	YOL122C	SOF1	P33750	489 aa	Known RBP	4.34	□□□□□ -1.71
SMF1	YOL122C	WBP1	P33767	430 aa	Known RBP	4.34	□□□□□ -1.71
SMF1	YOL122C	YBR242W	P38331	238 aa		4.34	□□□□□ -1.71
SMF1	YOL122C	DPB11	P47027	764 aa	Predicted RBP	4.34	□□□□□ -1.71
SMF1	YOL122C	GPI8	P49018	411 aa		4.34	□□□□□ -1.71
SMF1	YOL122C	FMS1	P50264	508 aa		4.34	□□□□□ -1.71
SMF1	YOL122C	SHE10	P53075	577 aa		4.34	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms