RNA–Protein interactions for RNA: YMR247C

RKR1, Transcript of RING domain E3 ubiquitin ligase, yeastyeast

Gene RKR1, Length 4,689 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RKR1YMR247C TSC10P38342 320 aa0.89□□□□□ -2.27
RKR1YMR247C HIS6P40545 261 aa0.89□□□□□ -2.27
RKR1YMR247C REE1P40893 198 aa0.89□□□□□ -2.27
RKR1YMR247C CDC1P40986 491 aa0.89□□□□□ -2.27
RKR1YMR247C BUD27P43573 796 aaKnown RBP RIP-Chip data0.89□□□□□ -2.27not detected
RKR1YMR247C YPI1P43587 155 aa0.89□□□□□ -2.27
RKR1YMR247C TOF2Q02208 771 aa0.89□□□□□ -2.27
RKR1YMR247C CRN1Q06440 651 aa0.89□□□□□ -2.27
RKR1YMR247C GRC3Q07845 632 aa0.89□□□□□ -2.27
RKR1YMR247C YOR389WQ08912 624 aa0.89□□□□□ -2.27
RKR1YMR247C JID1Q12350 301 aa0.89□□□□□ -2.27
RKR1YMR247C YBR298C-AQ8TGK4 73 aa0.89□□□□□ -2.27
RKR1YMR247C XRN1P22147 1528 aaKnown RBP0.89□□□□□ -2.27
RKR1YMR247C YRF1-2P40105 1681 aa0.89□□□□□ -2.27
RKR1YMR247C ARG4P04076 463 aaPredicted RBP0.89□□□□□ -2.27
RKR1YMR247C YPK1P12688 680 aaKnown RBP0.89□□□□□ -2.27
RKR1YMR247C PRP2P20095 876 aaPredicted RBP0.89□□□□□ -2.27
RKR1YMR247C ERG3P32353 365 aa0.89□□□□□ -2.27
RKR1YMR247C YBR144CP34215 104 aa0.89□□□□□ -2.27
RKR1YMR247C ECM15P35195 104 aa0.89□□□□□ -2.27
RKR1YMR247C MID2P36027 376 aa0.89□□□□□ -2.27
RKR1YMR247C GEX2P36173 615 aa0.89□□□□□ -2.27
RKR1YMR247C STV1P37296 890 aa0.89□□□□□ -2.27
RKR1YMR247C EFM1P38732 585 aa0.89□□□□□ -2.27
RKR1YMR247C RPT2P40327 437 aaKnown RBP0.89□□□□□ -2.27
RKR1YMR247C IME4P41833 600 aa0.89□□□□□ -2.27
RKR1YMR247C GAT1P43574 510 aa0.89□□□□□ -2.27
RKR1YMR247C YPT11P48559 417 aa0.89□□□□□ -2.27
RKR1YMR247C BRO1P48582 844 aa0.89□□□□□ -2.27
RKR1YMR247C CLD1P53264 445 aa0.89□□□□□ -2.27
RKR1YMR247C RBG2P53295 368 aaKnown RBP0.89□□□□□ -2.27
RKR1YMR247C YNL092WP53934 400 aa0.89□□□□□ -2.27
RKR1YMR247C ASI3P53983 676 aa0.89□□□□□ -2.27
RKR1YMR247C YVH1Q02256 364 aaKnown RBP0.89□□□□□ -2.27
RKR1YMR247C HOT1Q03213 719 aa0.89□□□□□ -2.27
RKR1YMR247C RCR2Q03446 210 aaKnown RBP0.89□□□□□ -2.27
RKR1YMR247C YEH1Q07804 573 aa0.89□□□□□ -2.27
RKR1YMR247C THI20Q08224 551 aa0.89□□□□□ -2.27
RKR1YMR247C BUD21Q08492 214 aaPredicted RBP0.89□□□□□ -2.27
RKR1YMR247C SRN2Q99176 213 aa0.89□□□□□ -2.27
RKR1YMR247C TY1B-NL2Q99337 1749 aaKnown RBP0.89□□□□□ -2.27
RKR1YMR247C ATG2P53855 1592 aa0.89□□□□□ -2.27
RKR1YMR247C TY2A-LR1P0C2J4 438 aa0.89□□□□□ -2.27
RKR1YMR247C TY2A-FP0CX61 438 aa0.89□□□□□ -2.27
RKR1YMR247C TY2A-GR2P0CX62 438 aa0.89□□□□□ -2.27
RKR1YMR247C TY2A-CP25383 438 aa0.89□□□□□ -2.27
RKR1YMR247C DBF4P32325 704 aa0.89□□□□□ -2.27
RKR1YMR247C PEX5P35056 612 aa0.89□□□□□ -2.27
RKR1YMR247C UBP11P36026 717 aa0.89□□□□□ -2.27
RKR1YMR247C YER010CP40011 234 aa0.89□□□□□ -2.27
RKR1YMR247C IES5P40060 125 aa0.89□□□□□ -2.27
RKR1YMR247C PUG1P40100 303 aa0.89□□□□□ -2.27
RKR1YMR247C PFK26P40433 827 aaKnown RBP0.89□□□□□ -2.27
RKR1YMR247C YIL169CP40442 995 aa0.89□□□□□ -2.27
RKR1YMR247C XBP1P40489 647 aa0.89□□□□□ -2.27
RKR1YMR247C YGR126WP53274 230 aa0.89□□□□□ -2.27
RKR1YMR247C ADE16P54113 591 aaKnown RBP0.89□□□□□ -2.27
RKR1YMR247C TY2A-DR2Q03483 438 aa0.89□□□□□ -2.27
RKR1YMR247C YMR317WQ04893 1140 aa0.89□□□□□ -2.27
RKR1YMR247C SCW10Q04951 389 aa0.89□□□□□ -2.27
RKR1YMR247C RRP45Q05636 305 aaKnown RBP0.89□□□□□ -2.27
RKR1YMR247C ENT4Q07872 247 aa0.89□□□□□ -2.27
RKR1YMR247C IRC25Q07951 179 aa0.89□□□□□ -2.27
RKR1YMR247C YOR365CQ08844 703 aa0.89□□□□□ -2.27
RKR1YMR247C TY2A-BQ12260 438 aa0.89□□□□□ -2.27
RKR1YMR247C TY2A-OR2Q12293 438 aa0.89□□□□□ -2.27
RKR1YMR247C TY2A-DR1Q12392 438 aa0.89□□□□□ -2.27
RKR1YMR247C TY2A-OR1Q12439 438 aa0.89□□□□□ -2.27
RKR1YMR247C HTZ1Q12692 134 aaKnown RBP0.89□□□□□ -2.27
RKR1YMR247C TY2A-DR3Q99303 438 aa0.89□□□□□ -2.27
RKR1YMR247C TSC11P40061 1430 aa0.89□□□□□ -2.27
RKR1YMR247C CHC1P22137 1653 aaKnown RBP0.89□□□□□ -2.27
RKR1YMR247C PCT1P13259 424 aa0.89□□□□□ -2.27
RKR1YMR247C ART10P18634 518 aaKnown RBP0.89□□□□□ -2.27
RKR1YMR247C CLB3P24870 427 aa0.89□□□□□ -2.27
RKR1YMR247C PPZ1P26570 692 aa0.89□□□□□ -2.27
RKR1YMR247C TRS65P32893 560 aa0.89□□□□□ -2.27
RKR1YMR247C SPT10P35208 640 aa0.89□□□□□ -2.27
RKR1YMR247C KKQ8P36004 724 aa0.89□□□□□ -2.27
RKR1YMR247C PHD1P36093 366 aa0.89□□□□□ -2.27
RKR1YMR247C ERG7P38604 731 aa0.89□□□□□ -2.27
RKR1YMR247C YER130CP39959 443 aa0.89□□□□□ -2.27
RKR1YMR247C YJL068CP40363 299 aa0.89□□□□□ -2.27
RKR1YMR247C TAX4P47030 604 aa0.89□□□□□ -2.27
RKR1YMR247C TOM22P49334 152 aa0.89□□□□□ -2.27
RKR1YMR247C GPI1P53306 609 aa0.89□□□□□ -2.27
RKR1YMR247C FOL1P53848 824 aa0.89□□□□□ -2.27
RKR1YMR247C SKO1Q02100 647 aa0.89□□□□□ -2.27
RKR1YMR247C MGR3Q04472 501 aa0.89□□□□□ -2.27
RKR1YMR247C AIM32Q04689 311 aa0.89□□□□□ -2.27
RKR1YMR247C VID22Q05934 901 aa0.89□□□□□ -2.27
RKR1YMR247C TFC6Q06339 672 aa0.89□□□□□ -2.27
RKR1YMR247C SUL2Q12325 893 aa0.89□□□□□ -2.27
RKR1YMR247C THO2P53552 1597 aaKnown RBP0.89□□□□□ -2.27
RKR1YMR247C YPK9Q12697 1472 aa0.88□□□□□ -2.27
RKR1YMR247C FOB1O13329 566 aa0.88□□□□□ -2.27
RKR1YMR247C RPS21AP0C0V8 87 aaKnown RBP0.88□□□□□ -2.27
RKR1YMR247C YCP4P25349 247 aaKnown RBP0.88□□□□□ -2.27
RKR1YMR247C PUT3P25502 979 aaPredicted RBP0.88□□□□□ -2.27
RKR1YMR247C DEP1P31385 405 aa0.88□□□□□ -2.27
Retrieved 100 of 5,963 RNA–protein pairs in 16 ms