RNA–Protein interactions for RNA: YMR135C

GID8, Transcript of Subunit of GID Complex, binds strongly to central component Vid30p, yeastyeast

Gene GID8, Length 1,368 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GID8YMR135C LDB18Q07887 179 aa8.69□□□□□ -1.02
GID8YMR135C ICT1Q12385 394 aa8.69□□□□□ -1.02
GID8YMR135C MED11Q99278 115 aa8.69□□□□□ -1.02
GID8YMR135C RPS4AP0CX35 261 aaKnown RBP8.68□□□□□ -1.02
GID8YMR135C RPS4BP0CX36 261 aaKnown RBP8.68□□□□□ -1.02
GID8YMR135C NUP2P32499 720 aa8.68□□□□□ -1.02
GID8YMR135C COX13P32799 129 aa8.68□□□□□ -1.02
GID8YMR135C RPS1AP33442 255 aaKnown RBP8.68□□□□□ -1.02
GID8YMR135C RCN1P36054 211 aa8.68□□□□□ -1.02
GID8YMR135C YBR056WP38081 501 aa8.68□□□□□ -1.02
GID8YMR135C BSD2P38356 321 aa8.68□□□□□ -1.02
GID8YMR135C URA8P38627 578 aaPredicted RBP8.68□□□□□ -1.02
GID8YMR135C YHR045WP38775 560 aa8.68□□□□□ -1.02
GID8YMR135C NUP85P46673 744 aa8.68□□□□□ -1.02
GID8YMR135C BUD13P46947 266 aaPredicted RBP8.68□□□□□ -1.02
GID8YMR135C PET130P47065 347 aa8.68□□□□□ -1.02
GID8YMR135C YNR068CP53754 272 aa8.68□□□□□ -1.02
GID8YMR135C EFM6P53970 246 aa8.68□□□□□ -1.02
GID8YMR135C ARP4P80428 489 aa8.68□□□□□ -1.02
GID8YMR135C YDR124WQ04608 324 aa8.68□□□□□ -1.02
GID8YMR135C GAL83Q04739 417 aa8.68□□□□□ -1.02
GID8YMR135C ECM22Q05958 814 aaPredicted RBP8.68□□□□□ -1.02
GID8YMR135C BRR1Q99177 341 aaPredicted RBP8.68□□□□□ -1.02
GID8YMR135C MF(ALPHA)1P01149 165 aa8.67□□□□□ -1.02
GID8YMR135C ARG81P05085 880 aa8.67□□□□□ -1.02
GID8YMR135C HAP2P06774 265 aa8.67□□□□□ -1.02
GID8YMR135C GUK1P15454 187 aaKnown RBP8.67□□□□□ -1.02
GID8YMR135C IDI1P15496 288 aa8.67□□□□□ -1.02
GID8YMR135C PEX3P28795 441 aa8.67□□□□□ -1.02
GID8YMR135C SYN8P31377 255 aa8.67□□□□□ -1.02
GID8YMR135C PEP7P32609 515 aa8.67□□□□□ -1.02
GID8YMR135C IMP3P32899 183 aaPredicted RBP8.67□□□□□ -1.02
GID8YMR135C APE3P37302 537 aaKnown RBP8.67□□□□□ -1.02
GID8YMR135C DSF2P38213 736 aa8.67□□□□□ -1.02
GID8YMR135C SIF2P38262 535 aa8.67□□□□□ -1.02
GID8YMR135C ARP1P38696 384 aa8.67□□□□□ -1.02
GID8YMR135C TVP23P38962 199 aa8.67□□□□□ -1.02
GID8YMR135C ALD5P40047 520 aaKnown RBP8.67□□□□□ -1.02
GID8YMR135C GCD10P41814 478 aa8.67□□□□□ -1.02
GID8YMR135C YRB1P41920 201 aaKnown RBP8.67□□□□□ -1.02
GID8YMR135C UPF3P48412 387 aaKnown RBP8.67□□□□□ -1.02
GID8YMR135C MON1P53129 644 aa8.67□□□□□ -1.02
GID8YMR135C SLD3P53135 668 aa8.67□□□□□ -1.02
GID8YMR135C COP1P53622 1201 aaKnown RBP8.67□□□□□ -1.02
GID8YMR135C ESC8Q08119 714 aa8.67□□□□□ -1.02
GID8YMR135C UPC2Q12151 913 aa8.67□□□□□ -1.02
GID8YMR135C SVS1Q12254 260 aa8.67□□□□□ -1.02
GID8YMR135C MET17P06106 444 aa8.66□□□□□ -1.02
GID8YMR135C RAD7P06779 565 aa8.66□□□□□ -1.02
GID8YMR135C SPT3P06844 337 aa8.66□□□□□ -1.02
GID8YMR135C CAD1P24813 409 aaKnown RBP8.66□□□□□ -1.02
GID8YMR135C ARP2P32381 391 aaKnown RBP8.66□□□□□ -1.02
GID8YMR135C LRG1P35688 1017 aa8.66□□□□□ -1.02
GID8YMR135C MAK5P38112 773 aaPredicted RBP8.66□□□□□ -1.02
GID8YMR135C ETP1P38748 585 aaKnown RBP8.66□□□□□ -1.02
GID8YMR135C ACO2P39533 789 aa8.66□□□□□ -1.02
GID8YMR135C MTW1P39731 289 aa8.66□□□□□ -1.02
GID8YMR135C SAP4P53036 818 aa8.66□□□□□ -1.02
GID8YMR135C YNR063WP53749 607 aa8.66□□□□□ -1.02
GID8YMR135C MTD1Q02046 320 aaKnown RBP8.66□□□□□ -1.02
GID8YMR135C ENT2Q05785 613 aa8.66□□□□□ -1.02
GID8YMR135C VAM6Q07468 1049 aa8.66□□□□□ -1.02
GID8YMR135C SOG2Q08817 791 aa8.66□□□□□ -1.02
GID8YMR135C PKH2Q12236 1081 aaKnown RBP8.66□□□□□ -1.02
GID8YMR135C HXK2P04807 486 aaKnown RBP8.65□□□□□ -1.02
GID8YMR135C MRP13P12686 339 aa8.65□□□□□ -1.02
GID8YMR135C POL30P15873 258 aaKnown RBP8.65□□□□□ -1.02
GID8YMR135C OCA4P25366 362 aa8.65□□□□□ -1.02
GID8YMR135C NTG1P31378 399 aa8.65□□□□□ -1.02
GID8YMR135C MF(ALPHA)2P32435 120 aa8.65□□□□□ -1.02
GID8YMR135C RIB1P38066 345 aa8.65□□□□□ -1.02
GID8YMR135C POL12P38121 705 aaPredicted RBP8.65□□□□□ -1.02
GID8YMR135C GND1P38720 489 aaKnown RBP8.65□□□□□ -1.02
GID8YMR135C EFM1P38732 585 aa8.65□□□□□ -1.02
GID8YMR135C ERV46P39727 415 aa8.65□□□□□ -1.02
GID8YMR135C RGI2P40188 164 aa8.65□□□□□ -1.02
GID8YMR135C AYR1P40471 297 aa8.65□□□□□ -1.02
GID8YMR135C TY4A-JP47023 414 aa8.65□□□□□ -1.02
GID8YMR135C IMD4P50094 524 aaKnown RBP8.65□□□□□ -1.02
GID8YMR135C SHY1P53266 389 aa8.65□□□□□ -1.02
GID8YMR135C RPL34AP87262 121 aaPredicted RBP8.65□□□□□ -1.02
GID8YMR135C PML39Q03760 334 aa8.65□□□□□ -1.02
GID8YMR135C YDR132CQ03900 495 aa8.65□□□□□ -1.02
GID8YMR135C RRP17Q04031 235 aaPredicted RBP8.65□□□□□ -1.02
GID8YMR135C YHC1Q05900 231 aaKnown RBP8.65□□□□□ -1.02
GID8YMR135C MRN1Q08925 612 aaKnown RBP RIP-Chip data8.65□□□□□ -1.02not detected
GID8YMR135C ICL2Q12031 575 aa8.65□□□□□ -1.02
GID8YMR135C RCN2Q12044 265 aa8.65□□□□□ -1.02
GID8YMR135C MAM3Q12296 706 aa8.65□□□□□ -1.02
GID8YMR135C YPL119C-AQ3E751 87 aa8.65□□□□□ -1.02
GID8YMR135C APM4Q99186 491 aa8.65□□□□□ -1.02
GID8YMR135C RPS9AO13516 197 aaKnown RBP8.64□□□□□ -1.03
GID8YMR135C RPN13O13563 156 aa8.64□□□□□ -1.03
GID8YMR135C GPH1P06738 902 aaKnown RBP8.64□□□□□ -1.03
GID8YMR135C GCN3P14741 305 aa8.64□□□□□ -1.03
GID8YMR135C PPZ1P26570 692 aa8.64□□□□□ -1.03
GID8YMR135C PRP21P32524 280 aaPredicted RBP8.64□□□□□ -1.03
GID8YMR135C MRPL6P32904 214 aa8.64□□□□□ -1.03
GID8YMR135C DOM34P33309 386 aa8.64□□□□□ -1.03
GID8YMR135C GDH2P33327 1092 aaKnown RBP8.64□□□□□ -1.03
Retrieved 100 of 5,963 RNA–protein pairs in 34.6 ms