RNA–Protein interactions for RNA: YLR440C

SEC39, Transcript of Component of the Dsl1p tethering complex, yeast

Gene SEC39, Length 2,130 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC39	YLR440C	COA4	Q05809	96 aa		4.96	□□□□□ -1.62
SEC39	YLR440C	YAP7	Q08182	245 aa		4.96	□□□□□ -1.62
SEC39	YLR440C	YDL176W	Q12027	708 aa		4.96	□□□□□ -1.62
SEC39	YLR440C	ULA1	Q12059	462 aa		4.96	□□□□□ -1.62
SEC39	YLR440C	NCR1	Q12200	1170 aa		4.96	□□□□□ -1.62
SEC39	YLR440C	RTN2	Q12443	393 aa		4.96	□□□□□ -1.62
SEC39	YLR440C	MRPL23	Q12487	163 aa	Predicted RBP	4.96	□□□□□ -1.62
SEC39	YLR440C	RPP1A	P05318	106 aa	Predicted RBP	4.96	□□□□□ -1.62
SEC39	YLR440C	TPK1	P06244	397 aa		4.96	□□□□□ -1.62
SEC39	YLR440C	RAD1	P06777	1100 aa		4.96	□□□□□ -1.62
SEC39	YLR440C	FUM1	P08417	488 aa	Known RBP	4.96	□□□□□ -1.62
SEC39	YLR440C	MATALPHA1	P0CY06	175 aa		4.96	□□□□□ -1.62
SEC39	YLR440C	HMLALPHA1	P0CY07	175 aa		4.96	□□□□□ -1.62
SEC39	YLR440C	PDC5	P16467	563 aa	Known RBP	4.96	□□□□□ -1.62
SEC39	YLR440C	RAM1	P22007	431 aa		4.96	□□□□□ -1.62
SEC39	YLR440C	AMD2	P22580	549 aa		4.96	□□□□□ -1.62
SEC39	YLR440C	RIT1	P23796	513 aa		4.96	□□□□□ -1.62
SEC39	YLR440C	CPR4	P25334	318 aa		4.96	□□□□□ -1.62
SEC39	YLR440C	CIN8	P27895	1000 aa		4.96	□□□□□ -1.62
SEC39	YLR440C	TAE1	P38340	232 aa		4.96	□□□□□ -1.62
SEC39	YLR440C	IMD2	P38697	523 aa	Known RBP	4.96	□□□□□ -1.62
SEC39	YLR440C	YHR097C	P38809	366 aa	Known RBP	4.96	□□□□□ -1.62
SEC39	YLR440C	ORC6	P38826	435 aa		4.96	□□□□□ -1.62
SEC39	YLR440C	DPH1	P40487	425 aa	Known RBP	4.96	□□□□□ -1.62
SEC39	YLR440C	NIT2	P47016	307 aa		4.96	□□□□□ -1.62
SEC39	YLR440C	RTT101	P47050	842 aa		4.96	□□□□□ -1.62
SEC39	YLR440C	RRP46	P53256	223 aa	Predicted RBP	4.96	□□□□□ -1.62
SEC39	YLR440C	SLU7	Q02775	382 aa	Known RBP	4.96	□□□□□ -1.62
SEC39	YLR440C	PRM15	Q03262	622 aa		4.96	□□□□□ -1.62
SEC39	YLR440C	URH1	Q04179	340 aa		4.96	□□□□□ -1.62
SEC39	YLR440C	CSI1	Q04368	295 aa		4.96	□□□□□ -1.62
SEC39	YLR440C	GLO2	Q05584	274 aa		4.96	□□□□□ -1.62
SEC39	YLR440C	YLR297W	Q05899	129 aa		4.96	□□□□□ -1.62
SEC39	YLR440C	MHR1	Q06630	226 aa		4.96	□□□□□ -1.62
SEC39	YLR440C	YLR001C	Q07895	862 aa		4.96	□□□□□ -1.62
SEC39	YLR440C	FYV7	Q12247	151 aa		4.96	□□□□□ -1.62
SEC39	YLR440C	BMT6	Q12291	365 aa		4.96	□□□□□ -1.62
SEC39	YLR440C	COQ4	O13525	335 aa		4.95	□□□□□ -1.62
SEC39	YLR440C	MSF1	P08425	469 aa		4.95	□□□□□ -1.62
SEC39	YLR440C	YCK2	P23292	546 aa	Known RBP	4.95	□□□□□ -1.62
SEC39	YLR440C	SYP1	P25623	870 aa	Known RBP	4.95	□□□□□ -1.62
SEC39	YLR440C	CAM1	P29547	415 aa	Known RBP	4.95	□□□□□ -1.62
SEC39	YLR440C	KAP122	P32767	1081 aa		4.95	□□□□□ -1.62
SEC39	YLR440C	GCS1	P35197	352 aa		4.95	□□□□□ -1.62
SEC39	YLR440C	APE3	P37302	537 aa	Known RBP	4.95	□□□□□ -1.62
SEC39	YLR440C	GIP1	P38229	639 aa		4.95	□□□□□ -1.62
SEC39	YLR440C	STS1	P38637	319 aa		4.95	□□□□□ -1.62
SEC39	YLR440C	YAT2	P40017	923 aa		4.95	□□□□□ -1.62
SEC39	YLR440C	GID8	P40208	455 aa		4.95	□□□□□ -1.62
SEC39	YLR440C	RRN7	P40992	514 aa		4.95	□□□□□ -1.62
SEC39	YLR440C	IDS2	P46958	469 aa		4.95	□□□□□ -1.62
SEC39	YLR440C	EMC2	P47133	292 aa	Known RBP	4.95	□□□□□ -1.62
SEC39	YLR440C	HSV2	P50079	448 aa	Predicted RBP	4.95	□□□□□ -1.62
SEC39	YLR440C	SLD3	P53135	668 aa		4.95	□□□□□ -1.62
SEC39	YLR440C	YNL134C	P53912	376 aa	Known RBP	4.95	□□□□□ -1.62
SEC39	YLR440C	UBP16	Q02863	499 aa		4.95	□□□□□ -1.62
SEC39	YLR440C	MTQ2	Q03920	221 aa	Predicted RBP	4.95	□□□□□ -1.62
SEC39	YLR440C	PPM1	Q04081	328 aa		4.95	□□□□□ -1.62
SEC39	YLR440C	TRS120	Q04183	1289 aa		4.95	□□□□□ -1.62
SEC39	YLR440C	MRPL1	Q04599	285 aa		4.95	□□□□□ -1.62
SEC39	YLR440C	FAR10	Q06001	478 aa		4.95	□□□□□ -1.62
SEC39	YLR440C	VTA1	Q06263	330 aa		4.95	□□□□□ -1.62
SEC39	YLR440C	YPR127W	Q06494	345 aa		4.95	□□□□□ -1.62
SEC39	YLR440C	PIB1	Q06651	286 aa		4.95	□□□□□ -1.62
SEC39	YLR440C	NGL1	Q08213	363 aa	Known RBP	4.95	□□□□□ -1.62
SEC39	YLR440C	ISN1	Q99312	450 aa		4.95	□□□□□ -1.62
SEC39	YLR440C	Q0144	Q9ZZW2	109 aa		4.95	□□□□□ -1.62
SEC39	YLR440C	STE2	D6VTK4	431 aa		4.94	□□□□□ -1.62
SEC39	YLR440C	RPS17A	P02407	136 aa	Known RBP	4.94	□□□□□ -1.62
SEC39	YLR440C	RAD18	P10862	487 aa		4.94	□□□□□ -1.62
SEC39	YLR440C	HMG2	P12684	1045 aa		4.94	□□□□□ -1.62
SEC39	YLR440C	RPS17B	P14127	136 aa	Known RBP	4.94	□□□□□ -1.62
SEC39	YLR440C	KIP1	P28742	1111 aa		4.94	□□□□□ -1.62
SEC39	YLR440C	GSH1	P32477	678 aa		4.94	□□□□□ -1.62
SEC39	YLR440C	MRT4	P33201	236 aa	Known RBP	4.94	□□□□□ -1.62
SEC39	YLR440C	YOX1	P34161	385 aa		4.94	□□□□□ -1.62
SEC39	YLR440C	ADH5	P38113	351 aa	Known RBP	4.94	□□□□□ -1.62
SEC39	YLR440C	NCL1	P38205	684 aa	Known RBP	4.94	□□□□□ -1.62
SEC39	YLR440C	PAC1	P39946	494 aa	Known RBP	4.94	□□□□□ -1.62
SEC39	YLR440C	KTR7	P40504	517 aa		4.94	□□□□□ -1.62
SEC39	YLR440C	AGP3	P43548	558 aa		4.94	□□□□□ -1.62
SEC39	YLR440C	CAF16	P43569	289 aa		4.94	□□□□□ -1.62
SEC39	YLR440C	CTK3	P46963	296 aa	Predicted RBP	4.94	□□□□□ -1.62
SEC39	YLR440C	CLA4	P48562	842 aa		4.94	□□□□□ -1.62
SEC39	YLR440C	ZRG17	P53735	605 aa		4.94	□□□□□ -1.62
SEC39	YLR440C	DUS1	P53759	423 aa	Known RBP	4.94	□□□□□ -1.62
SEC39	YLR440C	NOP13	P53883	403 aa	Known RBP RIP-Chip data	4.94	□□□□□ -1.62	not detected
SEC39	YLR440C	SKI8	Q02793	397 aa	Predicted RBP	4.94	□□□□□ -1.62
SEC39	YLR440C	NOG1	Q02892	647 aa	Known RBP	4.94	□□□□□ -1.62
SEC39	YLR440C	NHP10	Q03435	203 aa		4.94	□□□□□ -1.62
SEC39	YLR440C	RSB1	Q08417	382 aa		4.94	□□□□□ -1.62
SEC39	YLR440C	RAD59	Q12223	238 aa		4.94	□□□□□ -1.62
SEC39	YLR440C	YDL206W	Q12424	762 aa		4.94	□□□□□ -1.62
SEC39	YLR440C	PMD1	P32634	1753 aa		4.94	□□□□□ -1.62
SEC39	YLR440C	CCP1	P00431	361 aa		4.94	□□□□□ -1.62
SEC39	YLR440C	YMR085W	P0CF18	432 aa		4.94	□□□□□ -1.62
SEC39	YLR440C	PMR1	P13586	950 aa		4.94	□□□□□ -1.62
SEC39	YLR440C	CDC34	P14682	295 aa		4.94	□□□□□ -1.62
SEC39	YLR440C	APE1	P14904	514 aa		4.94	□□□□□ -1.62
SEC39	YLR440C	HPR1	P17629	752 aa	Known RBP	4.94	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 59.1 ms