RNA–Protein interactions for RNA: YLR438C-A

LSM3, Transcript of Lsm (Like Sm) protein, yeastyeast

Gene LSM3, Length 270 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSM3YLR438C-A YJR149WP47177 404 aa12.43□□□□□ -0.42
LSM3YLR438C-A YJR154WP47181 346 aa12.43□□□□□ -0.42
LSM3YLR438C-A ECM9Q02202 377 aa12.43□□□□□ -0.42
LSM3YLR438C-A YDL129WQ07555 291 aa12.43□□□□□ -0.42
LSM3YLR438C-A SRO7Q12038 1033 aa12.43□□□□□ -0.42
LSM3YLR438C-A RRP42Q12277 265 aaPredicted RBP12.43□□□□□ -0.42
LSM3YLR438C-A STE3P06783 470 aa12.42□□□□□ -0.42
LSM3YLR438C-A PRP16P15938 1071 aaPredicted RBP12.42□□□□□ -0.42
LSM3YLR438C-A CLN2P20438 545 aa12.42□□□□□ -0.42
LSM3YLR438C-A YCK2P23292 546 aaKnown RBP12.42□□□□□ -0.42
LSM3YLR438C-A BUB2P26448 306 aaPredicted RBP12.42□□□□□ -0.42
LSM3YLR438C-A RFC3P38629 340 aa12.42□□□□□ -0.42
LSM3YLR438C-A DED81P38707 554 aaKnown RBP12.42□□□□□ -0.42
LSM3YLR438C-A INM1P38710 295 aa12.42□□□□□ -0.42
LSM3YLR438C-A YIL108WP40483 696 aaKnown RBP12.42□□□□□ -0.42
LSM3YLR438C-A CCT7P42943 550 aaKnown RBP12.42□□□□□ -0.42
LSM3YLR438C-A UBP2Q01476 1272 aa12.42□□□□□ -0.42
LSM3YLR438C-A RGT2Q12300 763 aa12.42□□□□□ -0.42
LSM3YLR438C-A RIB2Q12362 591 aaKnown RBP12.42□□□□□ -0.42
LSM3YLR438C-A RNA1P11745 407 aaKnown RBP12.41□□□□□ -0.42
LSM3YLR438C-A SCL1P21243 252 aaKnown RBP12.41□□□□□ -0.42
LSM3YLR438C-A MVD1P32377 396 aaKnown RBP12.41□□□□□ -0.42
LSM3YLR438C-A CBF5P33322 483 aaKnown RBP RIP-Chip data12.41□□□□□ -0.42not detected
LSM3YLR438C-A UBP14P38237 781 aaKnown RBP12.41□□□□□ -0.42
LSM3YLR438C-A FKH2P41813 862 aa12.41□□□□□ -0.42
LSM3YLR438C-A NUP85P46673 744 aa12.41□□□□□ -0.42
LSM3YLR438C-A TY4A-JP47023 414 aa12.41□□□□□ -0.42
LSM3YLR438C-A YJR030CP47101 745 aa12.41□□□□□ -0.42
LSM3YLR438C-A GAS3Q03655 524 aa12.41□□□□□ -0.42
LSM3YLR438C-A FMN1Q03778 218 aa12.41□□□□□ -0.42
LSM3YLR438C-A SPC24Q04477 213 aa12.41□□□□□ -0.42
LSM3YLR438C-A YMR034CQ05131 434 aaPredicted RBP12.41□□□□□ -0.42
LSM3YLR438C-A RAD34Q06665 692 aa12.41□□□□□ -0.42
LSM3YLR438C-A MDM35O60200 86 aa12.4□□□□□ -0.42
LSM3YLR438C-A SPT3P06844 337 aa12.4□□□□□ -0.42
LSM3YLR438C-A YPT35P38815 214 aaKnown RBP12.4□□□□□ -0.42
LSM3YLR438C-A YEN1P40028 759 aa12.4□□□□□ -0.42
LSM3YLR438C-A GCD10P41814 478 aa12.4□□□□□ -0.42
LSM3YLR438C-A SWS2P53937 143 aa12.4□□□□□ -0.42
LSM3YLR438C-A GTR1Q00582 310 aa12.4□□□□□ -0.42
LSM3YLR438C-A TRM82Q03774 444 aa12.4□□□□□ -0.42
LSM3YLR438C-A ESA1Q08649 445 aa12.4□□□□□ -0.42
LSM3YLR438C-A GPB1Q08886 897 aa12.4□□□□□ -0.42
LSM3YLR438C-A IOC2Q12072 812 aa12.4□□□□□ -0.42
LSM3YLR438C-A ATG29Q12092 213 aa12.4□□□□□ -0.42
LSM3YLR438C-A YPR011CQ12251 326 aa12.4□□□□□ -0.42
LSM3YLR438C-A HSH49Q99181 213 aaPredicted RBP12.4□□□□□ -0.42
LSM3YLR438C-A OXP1P28273 1286 aa12.39□□□□□ -0.43
LSM3YLR438C-A WSC4P38739 605 aa12.39□□□□□ -0.43
LSM3YLR438C-A ELO1P39540 310 aa12.39□□□□□ -0.43
LSM3YLR438C-A NDE1P40215 560 aa12.39□□□□□ -0.43
LSM3YLR438C-A MET18P40469 1032 aa12.39□□□□□ -0.43
LSM3YLR438C-A YPT32P51996 222 aaKnown RBP12.39□□□□□ -0.43
LSM3YLR438C-A COS12P53053 380 aa12.39□□□□□ -0.43
LSM3YLR438C-A VHS1Q03785 461 aa12.39□□□□□ -0.43
LSM3YLR438C-A ARG1P22768 420 aa12.38□□□□□ -0.43
LSM3YLR438C-A DBR1P24309 405 aaKnown RBP12.38□□□□□ -0.43
LSM3YLR438C-A SSE1P32589 693 aaKnown RBP12.38□□□□□ -0.43
LSM3YLR438C-A SOL2P37262 315 aa12.38□□□□□ -0.43
LSM3YLR438C-A TRM7P38238 310 aaKnown RBP12.38□□□□□ -0.43
LSM3YLR438C-A BMT2P38278 337 aa12.38□□□□□ -0.43
LSM3YLR438C-A ARN1P38731 627 aa12.38□□□□□ -0.43
LSM3YLR438C-A ZIM17P42844 174 aa12.38□□□□□ -0.43
LSM3YLR438C-A GCV1P48015 400 aa12.38□□□□□ -0.43
LSM3YLR438C-A THI73Q07904 523 aa12.38□□□□□ -0.43
LSM3YLR438C-A GPR1Q12361 961 aa12.38□□□□□ -0.43
LSM3YLR438C-A AI3P03877 415 aa12.37□□□□□ -0.43
LSM3YLR438C-A PRP6P19735 899 aaPredicted RBP12.37□□□□□ -0.43
LSM3YLR438C-A PPH21P23594 369 aa12.37□□□□□ -0.43
LSM3YLR438C-A ERG6P25087 383 aaKnown RBP12.37□□□□□ -0.43
LSM3YLR438C-A RAD14P28519 371 aa12.37□□□□□ -0.43
LSM3YLR438C-A NTR2P36118 322 aaPredicted RBP12.37□□□□□ -0.43
LSM3YLR438C-A RLP7P40693 322 aaKnown RBP12.37□□□□□ -0.43
LSM3YLR438C-A SSU1P41930 458 aa12.37□□□□□ -0.43
LSM3YLR438C-A STB2P46679 850 aa12.37□□□□□ -0.43
LSM3YLR438C-A YGR053CP53234 283 aa12.37□□□□□ -0.43
LSM3YLR438C-A YDR444WQ04093 687 aa12.37□□□□□ -0.43
LSM3YLR438C-A GTB1Q04924 702 aa12.37□□□□□ -0.43
LSM3YLR438C-A SGT1Q08446 395 aa12.37□□□□□ -0.43
LSM3YLR438C-A LAT1P12695 482 aaKnown RBP12.36□□□□□ -0.43
LSM3YLR438C-A MGM101P32787 269 aaKnown RBP12.36□□□□□ -0.43
LSM3YLR438C-A PTC1P35182 281 aa12.36□□□□□ -0.43
LSM3YLR438C-A PIM1P36775 1133 aa12.36□□□□□ -0.43
LSM3YLR438C-A YBL029WP38201 376 aa12.36□□□□□ -0.43
LSM3YLR438C-A YHL008CP38750 627 aa12.36□□□□□ -0.43
LSM3YLR438C-A YAL037WP39728 267 aa12.36□□□□□ -0.43
LSM3YLR438C-A YGL176CP46945 554 aa12.36□□□□□ -0.43
LSM3YLR438C-A NNF2P53253 936 aa12.36□□□□□ -0.43
LSM3YLR438C-A AAT1Q01802 451 aa12.36□□□□□ -0.43
LSM3YLR438C-A YMR102CQ03177 834 aa12.36□□□□□ -0.43
LSM3YLR438C-A ROT1Q03691 256 aa12.36□□□□□ -0.43
LSM3YLR438C-A YEH2Q07950 538 aa12.36□□□□□ -0.43
LSM3YLR438C-A UAF30Q08747 228 aa12.36□□□□□ -0.43
LSM3YLR438C-A SUL2Q12325 893 aa12.36□□□□□ -0.43
LSM3YLR438C-A GBP2P25555 427 aaKnown RBP RIP-Chip data12.35□□□□□ -0.43not detected
LSM3YLR438C-A PET309P32522 965 aaPredicted RBP12.35□□□□□ -0.43
LSM3YLR438C-A SIP2P34164 415 aaKnown RBP12.35□□□□□ -0.43
LSM3YLR438C-A CUE2P36075 443 aaKnown RBP12.35□□□□□ -0.43
LSM3YLR438C-A CAB2P40506 365 aa12.35□□□□□ -0.43
LSM3YLR438C-A USE1P53146 245 aa12.35□□□□□ -0.43
Retrieved 100 of 5,963 RNA–protein pairs in 17.4 ms