RNA–Protein interactions for RNA: YLR417W

VPS36, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene VPS36, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS36YLR417W PYK2P52489 506 aaKnown RBP4.98□□□□□ -1.61
VPS36YLR417W YGR126WP53274 230 aa4.98□□□□□ -1.61
VPS36YLR417W IDP3P53982 420 aaKnown RBP4.98□□□□□ -1.61
VPS36YLR417W TAP42Q04372 366 aa4.98□□□□□ -1.61
VPS36YLR417W ARP10Q04549 284 aa4.98□□□□□ -1.61
VPS36YLR417W AIM32Q04689 311 aa4.98□□□□□ -1.61
VPS36YLR417W PFA4Q12006 378 aa4.98□□□□□ -1.61
VPS36YLR417W AFI1Q99222 893 aa4.98□□□□□ -1.61
VPS36YLR417W RPL3P14126 387 aaKnown RBP4.97□□□□□ -1.61
VPS36YLR417W PRP2P20095 876 aaPredicted RBP4.97□□□□□ -1.61
VPS36YLR417W CNA1P23287 553 aa4.97□□□□□ -1.61
VPS36YLR417W APE4P38821 490 aa4.97□□□□□ -1.61
VPS36YLR417W ZIM17P42844 174 aa4.97□□□□□ -1.61
VPS36YLR417W ALK1P43633 760 aaKnown RBP4.97□□□□□ -1.61
VPS36YLR417W KAP120Q02932 1032 aa4.97□□□□□ -1.61
VPS36YLR417W SOV1Q04748 898 aa4.97□□□□□ -1.61
VPS36YLR417W BNR1P40450 1375 aa4.97□□□□□ -1.61
VPS36YLR417W TCB3Q03640 1545 aaKnown RBP4.97□□□□□ -1.61
VPS36YLR417W HOM2P13663 365 aaKnown RBP4.97□□□□□ -1.61
VPS36YLR417W CPR2P23285 205 aa4.97□□□□□ -1.61
VPS36YLR417W SNT1P25357 1226 aa4.97□□□□□ -1.61
VPS36YLR417W ECM32P32644 1121 aaKnown RBP4.97□□□□□ -1.61
VPS36YLR417W SNO3P43544 222 aa4.97□□□□□ -1.61
VPS36YLR417W BUD27P43573 796 aaKnown RBP RIP-Chip data4.97□□□□□ -1.61not detected
VPS36YLR417W CAF130P53280 1122 aaPredicted RBP4.97□□□□□ -1.61
VPS36YLR417W YNL144CP53907 740 aa4.97□□□□□ -1.61
VPS36YLR417W NCE102Q12207 173 aaRIP-Chip data4.97□□□□□ -1.61not detected
VPS36YLR417W FRE7Q12333 620 aa4.97□□□□□ -1.61
VPS36YLR417W RRI1Q12468 440 aa4.97□□□□□ -1.61
VPS36YLR417W CBP1P07252 654 aa4.96□□□□□ -1.62
VPS36YLR417W SNF3P10870 884 aa4.96□□□□□ -1.62
VPS36YLR417W MDH1P17505 334 aaKnown RBP RIP-Chip data4.96□□□□□ -1.62not detected
VPS36YLR417W MBR1P23493 339 aa4.96□□□□□ -1.62
VPS36YLR417W RML2P32611 393 aa4.96□□□□□ -1.62
VPS36YLR417W ULP2P40537 1034 aaPredicted RBP4.96□□□□□ -1.62
VPS36YLR417W VMA13P41807 478 aaKnown RBP4.96□□□□□ -1.62
VPS36YLR417W CAC2Q04199 468 aa4.96□□□□□ -1.62
VPS36YLR417W DON1Q05610 365 aa4.96□□□□□ -1.62
VPS36YLR417W ERG11P10614 530 aa4.95□□□□□ -1.62
VPS36YLR417W RPB8P20436 146 aa4.95□□□□□ -1.62
VPS36YLR417W IDH2P28241 369 aaKnown RBP4.95□□□□□ -1.62
VPS36YLR417W TFB1P32776 642 aa4.95□□□□□ -1.62
VPS36YLR417W SHP1P34223 423 aa4.95□□□□□ -1.62
VPS36YLR417W YIL060WP40519 144 aa4.95□□□□□ -1.62
VPS36YLR417W ATG27P46989 271 aa4.95□□□□□ -1.62
VPS36YLR417W AIM22P47051 409 aa4.95□□□□□ -1.62
VPS36YLR417W VTC3Q02725 835 aa4.95□□□□□ -1.62
VPS36YLR417W MCP2Q06567 569 aa4.95□□□□□ -1.62
VPS36YLR417W FMP45Q07651 309 aa4.95□□□□□ -1.62
VPS36YLR417W PUF2Q12221 1075 aaKnown RBP RIP-Chip data4.95□□□□□ -1.62not detected
VPS36YLR417W PEP4P07267 405 aaKnown RBP4.94□□□□□ -1.62
VPS36YLR417W MNE1P24720 663 aa4.94□□□□□ -1.62
VPS36YLR417W ERV1P27882 189 aa4.94□□□□□ -1.62
VPS36YLR417W YME2P32843 850 aa4.94□□□□□ -1.62
VPS36YLR417W TUL1P36096 758 aa4.94□□□□□ -1.62
VPS36YLR417W STV1P37296 890 aa4.94□□□□□ -1.62
VPS36YLR417W YHR210CP38893 341 aa4.94□□□□□ -1.62
VPS36YLR417W PHO90P39535 881 aa4.94□□□□□ -1.62
VPS36YLR417W HXT9P40885 567 aa4.94□□□□□ -1.62
VPS36YLR417W CAK1P43568 368 aaPredicted RBP4.94□□□□□ -1.62
VPS36YLR417W NET1P47035 1189 aa4.94□□□□□ -1.62
VPS36YLR417W TCB2P48231 1178 aa4.94□□□□□ -1.62
VPS36YLR417W RSC9Q03124 581 aa4.94□□□□□ -1.62
VPS36YLR417W YMR160WQ03823 816 aa4.94□□□□□ -1.62
VPS36YLR417W POS5Q06892 414 aa4.94□□□□□ -1.62
VPS36YLR417W YDL057WQ07379 328 aa4.94□□□□□ -1.62
VPS36YLR417W PDH1Q12428 516 aaKnown RBP4.94□□□□□ -1.62
VPS36YLR417W GAL4P04386 881 aa4.94□□□□□ -1.62
VPS36YLR417W YMR085WP0CF18 432 aa4.94□□□□□ -1.62
VPS36YLR417W RAD14P28519 371 aa4.94□□□□□ -1.62
VPS36YLR417W MDL1P33310 695 aa4.94□□□□□ -1.62
VPS36YLR417W YKL023WP36103 277 aaKnown RBP4.94□□□□□ -1.62
VPS36YLR417W ROT2P38138 954 aa4.94□□□□□ -1.62
VPS36YLR417W TOM71P38825 639 aaKnown RBP4.94□□□□□ -1.62
VPS36YLR417W MBB1P39534 108 aa4.94□□□□□ -1.62
VPS36YLR417W GDI1P39958 451 aaKnown RBP4.94□□□□□ -1.62
VPS36YLR417W SNG1P46950 547 aa4.94□□□□□ -1.62
VPS36YLR417W OAZ1Q02803 292 aa4.94□□□□□ -1.62
VPS36YLR417W BRR1Q99177 341 aaPredicted RBP4.94□□□□□ -1.62
VPS36YLR417W PGK1P00560 416 aaKnown RBP4.93□□□□□ -1.62
VPS36YLR417W COR1P07256 457 aa4.93□□□□□ -1.62
VPS36YLR417W PPH22P23595 377 aa4.93□□□□□ -1.62
VPS36YLR417W CFD1P40558 293 aa4.93□□□□□ -1.62
VPS36YLR417W FMS1P50264 508 aa4.93□□□□□ -1.62
VPS36YLR417W COP1P53622 1201 aaKnown RBP4.93□□□□□ -1.62
VPS36YLR417W DUG3P53871 357 aa4.93□□□□□ -1.62
VPS36YLR417W HEF3P53978 1044 aaKnown RBP4.93□□□□□ -1.62
VPS36YLR417W THP1Q08231 455 aa4.93□□□□□ -1.62
VPS36YLR417W PAR32Q12515 295 aaKnown RBP4.93□□□□□ -1.62
VPS36YLR417W SPS4P09937 338 aa4.92□□□□□ -1.62
VPS36YLR417W SPB1P25582 841 aaPredicted RBP4.92□□□□□ -1.62
VPS36YLR417W VPH1P32563 840 aaKnown RBP4.92□□□□□ -1.62
VPS36YLR417W NIP100P33420 868 aa4.92□□□□□ -1.62
VPS36YLR417W PIM1P36775 1133 aa4.92□□□□□ -1.62
VPS36YLR417W NTC20P38302 140 aaPredicted RBP4.92□□□□□ -1.62
VPS36YLR417W LAG1P38703 411 aa4.92□□□□□ -1.62
VPS36YLR417W URB2P47108 1174 aa4.92□□□□□ -1.62
VPS36YLR417W VPS25P47142 202 aa4.92□□□□□ -1.62
VPS36YLR417W SOL4P53315 255 aa4.92□□□□□ -1.62
VPS36YLR417W SLG1P54867 378 aa4.92□□□□□ -1.62
Retrieved 100 of 5,963 RNA–protein pairs in 19.2 ms