RNA–Protein interactions for RNA: YLR412W

BER1, Transcript of Protein involved in microtubule-related processes, yeastyeast

Gene BER1, Length 825 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BER1YLR412W YJL213WP40896 331 aa2.86□□□□□ -1.95
BER1YLR412W SNG1P46950 547 aa2.86□□□□□ -1.95
BER1YLR412W YDL186WP48568 277 aa2.86□□□□□ -1.95
BER1YLR412W YGR127WP53275 312 aa2.86□□□□□ -1.95
BER1YLR412W BUD32P53323 261 aa2.86□□□□□ -1.95
BER1YLR412W SHR3Q02774 210 aa2.86□□□□□ -1.95
BER1YLR412W ETT1Q08421 412 aaKnown RBP2.86□□□□□ -1.95
BER1YLR412W SET6Q12529 373 aa2.86□□□□□ -1.95
BER1YLR412W PEP5P12868 1029 aa2.85□□□□□ -1.95
BER1YLR412W APE1P14904 514 aa2.85□□□□□ -1.95
BER1YLR412W BOS1P25385 244 aa2.85□□□□□ -1.95
BER1YLR412W SPC110P32380 944 aa2.85□□□□□ -1.95
BER1YLR412W MTC4P38335 694 aaKnown RBP2.85□□□□□ -1.95
BER1YLR412W LYS14P40971 790 aa2.85□□□□□ -1.95
BER1YLR412W FAR3P46671 204 aa2.85□□□□□ -1.95
BER1YLR412W COS10P52924 374 aa2.85□□□□□ -1.95
BER1YLR412W LCL3P53153 274 aa2.85□□□□□ -1.95
BER1YLR412W MSC1Q03104 513 aa2.85□□□□□ -1.95
BER1YLR412W RLI1Q03195 608 aaKnown RBP2.85□□□□□ -1.95
BER1YLR412W BUD22Q04347 519 aaKnown RBP2.85□□□□□ -1.95
BER1YLR412W ERP1Q05359 219 aaKnown RBP2.85□□□□□ -1.95
BER1YLR412W SDH5Q08230 162 aa2.85□□□□□ -1.95
BER1YLR412W RSA1Q08932 381 aa2.85□□□□□ -1.95
BER1YLR412W YPL272CQ08984 517 aa2.85□□□□□ -1.95
BER1YLR412W MF(ALPHA)1P01149 165 aa2.84□□□□□ -1.95
BER1YLR412W KAR3P17119 729 aa2.84□□□□□ -1.95
BER1YLR412W YCK1P23291 538 aa2.84□□□□□ -1.95
BER1YLR412W POL4P25615 582 aa2.84□□□□□ -1.95
BER1YLR412W YBR144CP34215 104 aa2.84□□□□□ -1.95
BER1YLR412W UBP11P36026 717 aa2.84□□□□□ -1.95
BER1YLR412W YKL023WP36103 277 aaKnown RBP2.84□□□□□ -1.95
BER1YLR412W OSH3P38713 996 aaKnown RBP2.84□□□□□ -1.95
BER1YLR412W AFG3P39925 761 aa2.84□□□□□ -1.95
BER1YLR412W CSM2P40465 213 aa2.84□□□□□ -1.95
BER1YLR412W DSD1P53095 428 aa2.84□□□□□ -1.95
BER1YLR412W MEP3P53390 489 aa2.84□□□□□ -1.95
BER1YLR412W YML037CQ03703 340 aa2.84□□□□□ -1.95
BER1YLR412W YDL057WQ07379 328 aa2.84□□□□□ -1.95
BER1YLR412W LUC7Q07508 261 aaPredicted RBP2.84□□□□□ -1.95
BER1YLR412W AYT1Q12226 474 aa2.84□□□□□ -1.95
BER1YLR412W CAR1P00812 333 aaKnown RBP2.83□□□□□ -1.96
BER1YLR412W RPL19AP0CX82 189 aaKnown RBP2.83□□□□□ -1.96
BER1YLR412W RPL19BP0CX83 189 aaPredicted RBP2.83□□□□□ -1.96
BER1YLR412W CBS2P14905 389 aa2.83□□□□□ -1.96
BER1YLR412W SGF29P25554 259 aa2.83□□□□□ -1.96
BER1YLR412W YIH1P25637 258 aa2.83□□□□□ -1.96
BER1YLR412W SSE2P32590 693 aaKnown RBP2.83□□□□□ -1.96
BER1YLR412W AVT5P38176 459 aa2.83□□□□□ -1.96
BER1YLR412W YBL029WP38201 376 aa2.83□□□□□ -1.96
BER1YLR412W APT1P49435 187 aaKnown RBP2.83□□□□□ -1.96
BER1YLR412W YGR126WP53274 230 aa2.83□□□□□ -1.96
BER1YLR412W BOR1P53838 576 aa2.83□□□□□ -1.96
BER1YLR412W YMR018WQ04364 514 aa2.83□□□□□ -1.96
BER1YLR412W SYO1Q07395 620 aa2.83□□□□□ -1.96
BER1YLR412W TLG2Q08144 397 aa2.83□□□□□ -1.96
BER1YLR412W NCE102Q12207 173 aaRIP-Chip data2.83□□□□□ -1.96not detected
BER1YLR412W SPE4Q12455 300 aa2.83□□□□□ -1.96
BER1YLR412W RPL20AP0CX23 172 aaKnown RBP2.82□□□□□ -1.96
BER1YLR412W RPL20BP0CX24 172 aaPredicted RBP2.82□□□□□ -1.96
BER1YLR412W SAN1P22470 610 aa2.82□□□□□ -1.96
BER1YLR412W YCR022CP25620 114 aa2.82□□□□□ -1.96
BER1YLR412W CHS3P29465 1165 aa2.82□□□□□ -1.96
BER1YLR412W NPR2P39923 615 aa2.82□□□□□ -1.96
BER1YLR412W YEL068CP39977 110 aa2.82□□□□□ -1.96
BER1YLR412W SCD6P45978 349 aaKnown RBP RIP-Chip data2.82□□□□□ -1.96not detected
BER1YLR412W ALT2P52892 507 aa2.82□□□□□ -1.96
BER1YLR412W YLL056CQ12177 298 aa2.82□□□□□ -1.96
BER1YLR412W HEM2P05373 342 aa2.81□□□□□ -1.96
BER1YLR412W MRP13P12686 339 aa2.81□□□□□ -1.96
BER1YLR412W AMD1P15274 810 aaKnown RBP2.81□□□□□ -1.96
BER1YLR412W PCA1P38360 1216 aa2.81□□□□□ -1.96
BER1YLR412W CIN4P39110 191 aa2.81□□□□□ -1.96
BER1YLR412W DRN1P53255 507 aaKnown RBP2.81□□□□□ -1.96
BER1YLR412W SLD5Q03406 294 aa2.81□□□□□ -1.96
BER1YLR412W YKU80Q04437 629 aa2.81□□□□□ -1.96
BER1YLR412W OPY2Q06810 360 aa2.81□□□□□ -1.96
BER1YLR412W FMP40Q08968 688 aaPredicted RBP2.81□□□□□ -1.96
BER1YLR412W YDL009CQ12210 107 aa2.81□□□□□ -1.96
BER1YLR412W YBR126W-AQ8TGU7 68 aa2.81□□□□□ -1.96
BER1YLR412W RAD52P06778 471 aaKnown RBP2.8□□□□□ -1.96
BER1YLR412W CDC16P09798 840 aa2.8□□□□□ -1.96
BER1YLR412W SUI2P20459 304 aaKnown RBP2.8□□□□□ -1.96
BER1YLR412W MCM10P32354 571 aa2.8□□□□□ -1.96
BER1YLR412W FRE1P32791 686 aa2.8□□□□□ -1.96
BER1YLR412W TIF3P34167 436 aaKnown RBP2.8□□□□□ -1.96
BER1YLR412W PMU1P36069 295 aa2.8□□□□□ -1.96
BER1YLR412W MUD2P36084 527 aaKnown RBP2.8□□□□□ -1.96
BER1YLR412W YHR210CP38893 341 aa2.8□□□□□ -1.96
BER1YLR412W YJL132WP47014 750 aa2.8□□□□□ -1.96
BER1YLR412W YJR154WP47181 346 aa2.8□□□□□ -1.96
BER1YLR412W DUO1P53168 247 aaKnown RBP2.8□□□□□ -1.96
BER1YLR412W IPI3P53877 555 aa2.8□□□□□ -1.96
BER1YLR412W BNA5Q05979 453 aa2.8□□□□□ -1.96
BER1YLR412W MRPL51Q06090 140 aaPredicted RBP2.8□□□□□ -1.96
BER1YLR412W YOR365CQ08844 703 aa2.8□□□□□ -1.96
BER1YLR412W HSH49Q99181 213 aaPredicted RBP2.8□□□□□ -1.96
BER1YLR412W SGS1P35187 1447 aa2.79□□□□□ -1.96
BER1YLR412W PEP4P07267 405 aaKnown RBP2.79□□□□□ -1.96
BER1YLR412W EST1P17214 699 aaPredicted RBP2.79□□□□□ -1.96
BER1YLR412W ART10P18634 518 aaKnown RBP2.79□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 31.9 ms