RNA–Protein interactions for RNA: YLR360W

VPS38, Transcript of Part of a Vps34p phosphatidylinositol 3-kinase complex, yeastyeast

Gene VPS38, Length 1,320 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS38YLR360W YKU80Q04437 629 aa3.45□□□□□ -1.86
VPS38YLR360W CDC45Q08032 650 aa3.45□□□□□ -1.86
VPS38YLR360W SDH5Q08230 162 aa3.45□□□□□ -1.86
VPS38YLR360W YPL272CQ08984 517 aa3.45□□□□□ -1.86
VPS38YLR360W SGS1P35187 1447 aa3.45□□□□□ -1.86
VPS38YLR360W PEP5P12868 1029 aa3.44□□□□□ -1.86
VPS38YLR360W ECM15P35195 104 aa3.44□□□□□ -1.86
VPS38YLR360W YKL023WP36103 277 aaKnown RBP3.44□□□□□ -1.86
VPS38YLR360W DSD1P53095 428 aa3.44□□□□□ -1.86
VPS38YLR360W BUD32P53323 261 aa3.44□□□□□ -1.86
VPS38YLR360W IPI3P53877 555 aa3.44□□□□□ -1.86
VPS38YLR360W RTT103Q05543 409 aa3.44□□□□□ -1.86
VPS38YLR360W THI20Q08224 551 aa3.44□□□□□ -1.86
VPS38YLR360W NOP58Q12499 511 aaKnown RBP3.44□□□□□ -1.86
VPS38YLR360W SEC53P07283 254 aaKnown RBP3.44□□□□□ -1.86
VPS38YLR360W MRS3P10566 314 aa3.44□□□□□ -1.86
VPS38YLR360W MRP13P12686 339 aa3.44□□□□□ -1.86
VPS38YLR360W GFD2P25370 566 aaKnown RBP3.44□□□□□ -1.86
VPS38YLR360W SGF29P25554 259 aa3.44□□□□□ -1.86
VPS38YLR360W PAH1P32567 862 aa3.44□□□□□ -1.86
VPS38YLR360W YTA12P40341 825 aa3.44□□□□□ -1.86
VPS38YLR360W RHO4Q00246 291 aa3.44□□□□□ -1.86
VPS38YLR360W MSC1Q03104 513 aa3.44□□□□□ -1.86
VPS38YLR360W YMR087WQ04299 284 aa3.44□□□□□ -1.86
VPS38YLR360W AAC3P18238 307 aa3.43□□□□□ -1.86
VPS38YLR360W SUI2P20459 304 aaKnown RBP3.43□□□□□ -1.86
VPS38YLR360W SAN1P22470 610 aa3.43□□□□□ -1.86
VPS38YLR360W SGV1P23293 657 aaKnown RBP3.43□□□□□ -1.86
VPS38YLR360W PTR2P32901 601 aa3.43□□□□□ -1.86
VPS38YLR360W SEF1P34228 1148 aa3.43□□□□□ -1.86
VPS38YLR360W CIN4P39110 191 aa3.43□□□□□ -1.86
VPS38YLR360W DHH1P39517 506 aaKnown RBP3.43□□□□□ -1.86
VPS38YLR360W APT1P49435 187 aaKnown RBP3.43□□□□□ -1.86
VPS38YLR360W CYB2P00175 591 aa3.42□□□□□ -1.86
VPS38YLR360W APE1P14904 514 aa3.42□□□□□ -1.86
VPS38YLR360W ART10P18634 518 aaKnown RBP3.42□□□□□ -1.86
VPS38YLR360W PEP3P27801 918 aa3.42□□□□□ -1.86
VPS38YLR360W NDC1P32500 655 aa3.42□□□□□ -1.86
VPS38YLR360W SAC6P32599 642 aaKnown RBP3.42□□□□□ -1.86
VPS38YLR360W SIP2P34164 415 aaKnown RBP3.42□□□□□ -1.86
VPS38YLR360W TIF3P34167 436 aaKnown RBP3.42□□□□□ -1.86
VPS38YLR360W OSH3P38713 996 aaKnown RBP3.42□□□□□ -1.86
VPS38YLR360W MDM31P38880 579 aa3.42□□□□□ -1.86
VPS38YLR360W FLC2P39719 783 aa3.42□□□□□ -1.86
VPS38YLR360W VPS52P39904 641 aa3.42□□□□□ -1.86
VPS38YLR360W NOP16P40007 231 aaKnown RBP3.42□□□□□ -1.86
VPS38YLR360W ALG5P40350 334 aa3.42□□□□□ -1.86
VPS38YLR360W TMA108P40462 946 aa3.42□□□□□ -1.86
VPS38YLR360W CSM2P40465 213 aa3.42□□□□□ -1.86
VPS38YLR360W SCW10Q04951 389 aa3.42□□□□□ -1.86
VPS38YLR360W YEH1Q07804 573 aa3.42□□□□□ -1.86
VPS38YLR360W PPT2Q12036 173 aa3.42□□□□□ -1.86
VPS38YLR360W NMD4Q12129 218 aa3.42□□□□□ -1.86
VPS38YLR360W YPT6Q99260 215 aa3.42□□□□□ -1.86
VPS38YLR360W CAR1P00812 333 aaKnown RBP3.41□□□□□ -1.86
VPS38YLR360W ATS1P31386 333 aa3.41□□□□□ -1.86
VPS38YLR360W KRE9P39005 276 aa3.41□□□□□ -1.86
VPS38YLR360W RTT101P47050 842 aa3.41□□□□□ -1.86
VPS38YLR360W ALT2P52892 507 aa3.41□□□□□ -1.86
VPS38YLR360W VID30P53076 958 aa3.41□□□□□ -1.86
VPS38YLR360W SVL3Q03088 825 aaKnown RBP3.41□□□□□ -1.86
VPS38YLR360W NCE102Q12207 173 aaRIP-Chip data3.41□□□□□ -1.86not detected
VPS38YLR360W SET6Q12529 373 aa3.41□□□□□ -1.86
VPS38YLR360W YBR298C-AQ8TGK4 73 aa3.41□□□□□ -1.86
VPS38YLR360W HSH49Q99181 213 aaPredicted RBP3.41□□□□□ -1.86
VPS38YLR360W SEM1O94742 89 aa3.4□□□□□ -1.87
VPS38YLR360W RPL15AP05748 204 aaKnown RBP3.4□□□□□ -1.87
VPS38YLR360W MTF1P14908 341 aaKnown RBP3.4□□□□□ -1.87
VPS38YLR360W REG2P38232 338 aa3.4□□□□□ -1.87
VPS38YLR360W CCT6P39079 546 aa3.4□□□□□ -1.87
VPS38YLR360W YFR016CP43597 1233 aaKnown RBP3.4□□□□□ -1.87
VPS38YLR360W GIS2P53849 153 aaKnown RBP RIP-Chip data3.4□□□□□ -1.87not detected
VPS38YLR360W RLI1Q03195 608 aaKnown RBP3.4□□□□□ -1.87
VPS38YLR360W RCN2Q12044 265 aa3.4□□□□□ -1.87
VPS38YLR360W RAD52P06778 471 aaKnown RBP3.39□□□□□ -1.87
VPS38YLR360W GDH1P07262 454 aaKnown RBP3.39□□□□□ -1.87
VPS38YLR360W PRP16P15938 1071 aaPredicted RBP3.39□□□□□ -1.87
VPS38YLR360W BUD14P27637 709 aa3.39□□□□□ -1.87
VPS38YLR360W NOP4P37838 685 aaKnown RBP3.39□□□□□ -1.87
VPS38YLR360W YHR210CP38893 341 aa3.39□□□□□ -1.87
VPS38YLR360W NPR2P39923 615 aa3.39□□□□□ -1.87
VPS38YLR360W RPH1P39956 796 aa3.39□□□□□ -1.87
VPS38YLR360W SGN1P40561 250 aaKnown RBP RIP-Chip data3.39□□□□□ -1.87not detected
VPS38YLR360W SCD6P45978 349 aaKnown RBP RIP-Chip data3.39□□□□□ -1.87not detected
VPS38YLR360W YJR154WP47181 346 aa3.39□□□□□ -1.87
VPS38YLR360W UPF3P48412 387 aaKnown RBP3.39□□□□□ -1.87
VPS38YLR360W IMD4P50094 524 aaKnown RBP3.39□□□□□ -1.87
VPS38YLR360W RBG2P53295 368 aaKnown RBP3.39□□□□□ -1.87
VPS38YLR360W TOF2Q02208 771 aa3.39□□□□□ -1.87
VPS38YLR360W RPM2Q02773 1202 aa3.39□□□□□ -1.87
VPS38YLR360W HCR1Q05775 265 aaKnown RBP3.39□□□□□ -1.87
VPS38YLR360W COQ9Q05779 260 aa3.39□□□□□ -1.87
VPS38YLR360W PEP4P07267 405 aaKnown RBP3.38□□□□□ -1.87
VPS38YLR360W MTC4P38335 694 aaKnown RBP3.38□□□□□ -1.87
VPS38YLR360W MSR1P38714 643 aa3.38□□□□□ -1.87
VPS38YLR360W RPR2P40571 144 aa3.38□□□□□ -1.87
VPS38YLR360W YJL213WP40896 331 aa3.38□□□□□ -1.87
VPS38YLR360W MRX6P48564 524 aa3.38□□□□□ -1.87
VPS38YLR360W RPC11Q04307 110 aaPredicted RBP3.38□□□□□ -1.87
VPS38YLR360W IVY1Q04934 453 aa3.38□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 22.3 ms