RNA–Protein interactions for RNA: YLR264W

RPS28B, Transcript of Protein component of the small (40S) ribosomal subunit, yeast

Gene RPS28B, Length 204 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPS28B	YLR264W	KIP1	P28742	1111 aa		3.15	□□□□□ -1.91
RPS28B	YLR264W	PRE4	P30657	266 aa		3.15	□□□□□ -1.91
RPS28B	YLR264W	CCR4	P31384	837 aa	Known RBP	3.15	□□□□□ -1.91
RPS28B	YLR264W	PRO3	P32263	286 aa	Known RBP	3.15	□□□□□ -1.91
RPS28B	YLR264W	DAL3	P32459	195 aa		3.15	□□□□□ -1.91
RPS28B	YLR264W	GCG1	P32656	232 aa	Known RBP	3.15	□□□□□ -1.91
RPS28B	YLR264W	KTR2	P33550	425 aa		3.15	□□□□□ -1.91
RPS28B	YLR264W	TGL1	P34163	548 aa		3.15	□□□□□ -1.91
RPS28B	YLR264W	AST1	P35183	429 aa		3.15	□□□□□ -1.91
RPS28B	YLR264W	HSL7	P38274	827 aa		3.15	□□□□□ -1.91
RPS28B	YLR264W	SPP381	P38282	291 aa	Predicted RBP	3.15	□□□□□ -1.91
RPS28B	YLR264W	TAE1	P38340	232 aa		3.15	□□□□□ -1.91
RPS28B	YLR264W	ORC6	P38826	435 aa		3.15	□□□□□ -1.91
RPS28B	YLR264W	AXL2	P38928	823 aa		3.15	□□□□□ -1.91
RPS28B	YLR264W	YER010C	P40011	234 aa		3.15	□□□□□ -1.91
RPS28B	YLR264W	RPN3	P40016	523 aa	Known RBP	3.15	□□□□□ -1.91
RPS28B	YLR264W	ICP55	P40051	511 aa		3.15	□□□□□ -1.91
RPS28B	YLR264W	GVP36	P40531	326 aa	Known RBP	3.15	□□□□□ -1.91
RPS28B	YLR264W	YAP5	P40574	245 aa		3.15	□□□□□ -1.91
RPS28B	YLR264W	SMK1	P41808	388 aa		3.15	□□□□□ -1.91
RPS28B	YLR264W	YFR018C	P43599	363 aa		3.15	□□□□□ -1.91
RPS28B	YLR264W	IRC7	P43623	340 aa		3.15	□□□□□ -1.91
RPS28B	YLR264W	PET130	P47065	347 aa		3.15	□□□□□ -1.91
RPS28B	YLR264W	ZRG17	P53735	605 aa		3.15	□□□□□ -1.91
RPS28B	YLR264W	ORC3	P54790	616 aa		3.15	□□□□□ -1.91
RPS28B	YLR264W	REG1	Q00816	1014 aa		3.15	□□□□□ -1.91
RPS28B	YLR264W	CTF19	Q02732	369 aa		3.15	□□□□□ -1.91
RPS28B	YLR264W	SKI8	Q02793	397 aa	Predicted RBP	3.15	□□□□□ -1.91
RPS28B	YLR264W	ROD1	Q02805	837 aa		3.15	□□□□□ -1.91
RPS28B	YLR264W	YPL080C	Q02826	108 aa		3.15	□□□□□ -1.91
RPS28B	YLR264W	ISU1	Q03020	165 aa		3.15	□□□□□ -1.91
RPS28B	YLR264W	YMR210W	Q03649	449 aa		3.15	□□□□□ -1.91
RPS28B	YLR264W	SNX41	Q04053	625 aa		3.15	□□□□□ -1.91
RPS28B	YLR264W	GIS4	Q04233	774 aa		3.15	□□□□□ -1.91
RPS28B	YLR264W	PLM2	Q04383	521 aa		3.15	□□□□□ -1.91
RPS28B	YLR264W	GLO2	Q05584	274 aa		3.15	□□□□□ -1.91
RPS28B	YLR264W	ECM30	Q06673	1274 aa		3.15	□□□□□ -1.91
RPS28B	YLR264W	CDA1	Q06702	301 aa		3.15	□□□□□ -1.91
RPS28B	YLR264W	LUC7	Q07508	261 aa	Predicted RBP	3.15	□□□□□ -1.91
RPS28B	YLR264W	FMP25	Q08023	583 aa		3.15	□□□□□ -1.91
RPS28B	YLR264W	UIP4	Q08926	304 aa		3.15	□□□□□ -1.91
RPS28B	YLR264W	ATG9	Q12142	997 aa		3.15	□□□□□ -1.91
RPS28B	YLR264W	YRR1	Q12172	810 aa		3.15	□□□□□ -1.91
RPS28B	YLR264W	YOL114C	Q12322	202 aa		3.15	□□□□□ -1.91
RPS28B	YLR264W	SUL2	Q12325	893 aa		3.15	□□□□□ -1.91
RPS28B	YLR264W	YDR262W	Q12331	272 aa		3.15	□□□□□ -1.91
RPS28B	YLR264W	SSK2	P53599	1579 aa		3.15	□□□□□ -1.91
RPS28B	YLR264W	QCR2	P07257	368 aa		3.14	□□□□□ -1.91
RPS28B	YLR264W	MET2	P08465	486 aa		3.14	□□□□□ -1.91
RPS28B	YLR264W	RNR2	P09938	399 aa	Known RBP	3.14	□□□□□ -1.91
RPS28B	YLR264W	NFT1	P0CE68	1218 aa		3.14	□□□□□ -1.91
RPS28B	YLR264W	COS2	P0CX12	379 aa		3.14	□□□□□ -1.91
RPS28B	YLR264W	COS3	P0CX13	379 aa		3.14	□□□□□ -1.91
RPS28B	YLR264W	CDC34	P14682	295 aa		3.14	□□□□□ -1.91
RPS28B	YLR264W	ARO3	P14843	370 aa	Known RBP	3.14	□□□□□ -1.91
RPS28B	YLR264W	MDH1	P17505	334 aa	Known RBP RIP-Chip data	3.14	□□□□□ -1.91	not detected
RPS28B	YLR264W	SRV2	P17555	526 aa	Known RBP	3.14	□□□□□ -1.91
RPS28B	YLR264W	MRPL33	P20084	86 aa		3.14	□□□□□ -1.91
RPS28B	YLR264W	IME1	P21190	360 aa		3.14	□□□□□ -1.91
RPS28B	YLR264W	SIR1	P21691	654 aa		3.14	□□□□□ -1.91
RPS28B	YLR264W	AMS1	P22855	1083 aa		3.14	□□□□□ -1.91
RPS28B	YLR264W	URE2	P23202	354 aa	Known RBP	3.14	□□□□□ -1.91
RPS28B	YLR264W	BUD5	P25300	642 aa	Predicted RBP	3.14	□□□□□ -1.91
RPS28B	YLR264W	LAC1	P28496	418 aa		3.14	□□□□□ -1.91
RPS28B	YLR264W	TRK2	P28584	889 aa		3.14	□□□□□ -1.91
RPS28B	YLR264W	BEM1	P29366	551 aa		3.14	□□□□□ -1.91
RPS28B	YLR264W	TFC1	P32367	649 aa		3.14	□□□□□ -1.91
RPS28B	YLR264W	PDB1	P32473	366 aa	Known RBP	3.14	□□□□□ -1.91
RPS28B	YLR264W	SIP1	P32578	815 aa		3.14	□□□□□ -1.91
RPS28B	YLR264W	MNS1	P32906	549 aa		3.14	□□□□□ -1.91
RPS28B	YLR264W	CSG2	P35206	410 aa		3.14	□□□□□ -1.91
RPS28B	YLR264W	ANR2	P36090	516 aa	Predicted RBP	3.14	□□□□□ -1.91
RPS28B	YLR264W	GLY1	P37303	387 aa	Known RBP	3.14	□□□□□ -1.91
RPS28B	YLR264W	MAL33	P38157	468 aa		3.14	□□□□□ -1.91
RPS28B	YLR264W	FAT1	P38225	669 aa		3.14	□□□□□ -1.91
RPS28B	YLR264W	ECM8	P38246	354 aa		3.14	□□□□□ -1.91
RPS28B	YLR264W	FES1	P38260	290 aa		3.14	□□□□□ -1.91
RPS28B	YLR264W	MCX1	P38323	520 aa	Predicted RBP	3.14	□□□□□ -1.91
RPS28B	YLR264W	PTC7	P38797	343 aa		3.14	□□□□□ -1.91
RPS28B	YLR264W	MNN9	P39107	395 aa	Known RBP	3.14	□□□□□ -1.91
RPS28B	YLR264W	GDH3	P39708	457 aa		3.14	□□□□□ -1.91
RPS28B	YLR264W	YEL025C	P39991	1188 aa		3.14	□□□□□ -1.91
RPS28B	YLR264W	SCS2	P40075	244 aa	Known RBP	3.14	□□□□□ -1.91
RPS28B	YLR264W	VRG4	P40107	337 aa		3.14	□□□□□ -1.91
RPS28B	YLR264W	MGS1	P40151	587 aa		3.14	□□□□□ -1.91
RPS28B	YLR264W	GID8	P40208	455 aa		3.14	□□□□□ -1.91
RPS28B	YLR264W	RFC4	P40339	323 aa	Known RBP	3.14	□□□□□ -1.91
RPS28B	YLR264W	PRM2	P40534	656 aa		3.14	□□□□□ -1.91
RPS28B	YLR264W	CHS6	P40955	746 aa		3.14	□□□□□ -1.91
RPS28B	YLR264W	VMA13	P41807	478 aa	Known RBP	3.14	□□□□□ -1.91
RPS28B	YLR264W	SSU1	P41930	458 aa		3.14	□□□□□ -1.91
RPS28B	YLR264W	YGR201C	P42936	225 aa		3.14	□□□□□ -1.91
RPS28B	YLR264W	PRM10	P42946	383 aa		3.14	□□□□□ -1.91
RPS28B	YLR264W	COS4	P43542	379 aa		3.14	□□□□□ -1.91
RPS28B	YLR264W	RPE1	P46969	238 aa		3.14	□□□□□ -1.91
RPS28B	YLR264W	JHD2	P47156	728 aa	Predicted RBP	3.14	□□□□□ -1.91
RPS28B	YLR264W	NBP35	P52920	328 aa		3.14	□□□□□ -1.91
RPS28B	YLR264W	TAF6	P53040	516 aa		3.14	□□□□□ -1.91
RPS28B	YLR264W	SLD3	P53135	668 aa		3.14	□□□□□ -1.91
RPS28B	YLR264W	YGL082W	P53155	381 aa		3.14	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms