RNA–Protein interactions for RNA: YLR211C

ATG38, Transcript of Homodimeric subunit of autophagy-specific PtdIns-3-kinase complex I, yeastyeast

Gene ATG38, Length 681 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG38YLR211C KAP123P40069 1113 aaKnown RBP3.29□□□□□ -1.88
ATG38YLR211C DPH1P40487 425 aaKnown RBP3.29□□□□□ -1.88
ATG38YLR211C YPI1P43587 155 aa3.29□□□□□ -1.88
ATG38YLR211C BNA5Q05979 453 aa3.29□□□□□ -1.88
ATG38YLR211C SYO1Q07395 620 aa3.29□□□□□ -1.88
ATG38YLR211C REV1P12689 985 aa3.28□□□□□ -1.88
ATG38YLR211C APT1P49435 187 aaKnown RBP3.28□□□□□ -1.88
ATG38YLR211C YGL082WP53155 381 aa3.28□□□□□ -1.88
ATG38YLR211C YSA1Q01976 231 aa3.28□□□□□ -1.88
ATG38YLR211C YML131WQ03102 365 aa3.28□□□□□ -1.88
ATG38YLR211C GLO2Q05584 274 aa3.28□□□□□ -1.88
ATG38YLR211C ETT1Q08421 412 aaKnown RBP3.28□□□□□ -1.88
ATG38YLR211C NBP2Q12163 236 aa3.28□□□□□ -1.88
ATG38YLR211C ARD1P07347 238 aaPredicted RBP3.27□□□□□ -1.89
ATG38YLR211C FUM1P08417 488 aaKnown RBP3.27□□□□□ -1.89
ATG38YLR211C RPL20AP0CX23 172 aaKnown RBP3.27□□□□□ -1.89
ATG38YLR211C RPL20BP0CX24 172 aaPredicted RBP3.27□□□□□ -1.89
ATG38YLR211C PEP5P12868 1029 aa3.27□□□□□ -1.89
ATG38YLR211C FUI1P38196 639 aa3.27□□□□□ -1.89
ATG38YLR211C SCD6P45978 349 aaKnown RBP RIP-Chip data3.27□□□□□ -1.89 RIP-Chip
ATG38YLR211C ARC1P46672 376 aaKnown RBP3.27□□□□□ -1.89
ATG38YLR211C SNG1P46950 547 aa3.27□□□□□ -1.89
ATG38YLR211C DSD1P53095 428 aa3.27□□□□□ -1.89
ATG38YLR211C DUG3P53871 357 aa3.27□□□□□ -1.89
ATG38YLR211C SPE4Q12455 300 aa3.27□□□□□ -1.89
ATG38YLR211C RPL19AP0CX82 189 aaKnown RBP3.26□□□□□ -1.89
ATG38YLR211C RPL19BP0CX83 189 aaPredicted RBP3.26□□□□□ -1.89
ATG38YLR211C PMU1P36069 295 aa3.26□□□□□ -1.89
ATG38YLR211C VPS24P36095 224 aaKnown RBP3.26□□□□□ -1.89
ATG38YLR211C DED81P38707 554 aaKnown RBP3.26□□□□□ -1.89
ATG38YLR211C IDP2P41939 412 aa3.26□□□□□ -1.89
ATG38YLR211C SHR3Q02774 210 aa3.26□□□□□ -1.89
ATG38YLR211C SLD5Q03406 294 aa3.26□□□□□ -1.89
ATG38YLR211C SSP2Q08646 371 aa3.26□□□□□ -1.89
ATG38YLR211C YOR365CQ08844 703 aa3.26□□□□□ -1.89
ATG38YLR211C TCO89Q08921 799 aa3.26□□□□□ -1.89
ATG38YLR211C YCL021W-AQ96VH3 125 aa3.26□□□□□ -1.89
ATG38YLR211C RNA14P25298 677 aaKnown RBP3.25□□□□□ -1.89
ATG38YLR211C BOS1P25385 244 aa3.25□□□□□ -1.89
ATG38YLR211C SGF29P25554 259 aa3.25□□□□□ -1.89
ATG38YLR211C IMG1P25626 169 aa3.25□□□□□ -1.89
ATG38YLR211C FRE1P32791 686 aa3.25□□□□□ -1.89
ATG38YLR211C SWH1P35845 1188 aa3.25□□□□□ -1.89
ATG38YLR211C YNK1P36010 153 aaKnown RBP3.25□□□□□ -1.89
ATG38YLR211C AUR1P36107 401 aaPredicted RBP3.25□□□□□ -1.89
ATG38YLR211C RPL32P38061 130 aaKnown RBP3.25□□□□□ -1.89
ATG38YLR211C PTR3P43606 678 aa3.25□□□□□ -1.89
ATG38YLR211C YJL132WP47014 750 aa3.25□□□□□ -1.89
ATG38YLR211C WSC2P53832 503 aa3.25□□□□□ -1.89
ATG38YLR211C YKU80Q04437 629 aa3.25□□□□□ -1.89
ATG38YLR211C YDL009CQ12210 107 aa3.25□□□□□ -1.89
ATG38YLR211C SUC2P00724 532 aa3.24□□□□□ -1.89
ATG38YLR211C RAD52P06778 471 aaKnown RBP3.24□□□□□ -1.89
ATG38YLR211C PEP4P07267 405 aaKnown RBP3.24□□□□□ -1.89
ATG38YLR211C CDC24P11433 854 aaPredicted RBP3.24□□□□□ -1.89
ATG38YLR211C SAC6P32599 642 aaKnown RBP3.24□□□□□ -1.89
ATG38YLR211C TIF3P34167 436 aaKnown RBP3.24□□□□□ -1.89
ATG38YLR211C NPR2P39923 615 aa3.24□□□□□ -1.89
ATG38YLR211C ALT2P52892 507 aa3.24□□□□□ -1.89
ATG38YLR211C RPC11Q04307 110 aaPredicted RBP3.24□□□□□ -1.89
ATG38YLR211C LUC7Q07508 261 aaPredicted RBP3.24□□□□□ -1.89
ATG38YLR211C SDH5Q08230 162 aa3.24□□□□□ -1.89
ATG38YLR211C PMR1P13586 950 aa3.23□□□□□ -1.89
ATG38YLR211C ELO2P25358 347 aa3.23□□□□□ -1.89
ATG38YLR211C RER1P25560 188 aa3.23□□□□□ -1.89
ATG38YLR211C PWP2P25635 923 aaKnown RBP3.23□□□□□ -1.89
ATG38YLR211C SSE2P32590 693 aaKnown RBP3.23□□□□□ -1.89
ATG38YLR211C YBR144CP34215 104 aa3.23□□□□□ -1.89
ATG38YLR211C YKL023WP36103 277 aaKnown RBP3.23□□□□□ -1.89
ATG38YLR211C ICS2P38284 255 aa3.23□□□□□ -1.89
ATG38YLR211C YHR210CP38893 341 aa3.23□□□□□ -1.89
ATG38YLR211C YEL068CP39977 110 aa3.23□□□□□ -1.89
ATG38YLR211C HAT2P39984 401 aa3.23□□□□□ -1.89
ATG38YLR211C FAR3P46671 204 aa3.23□□□□□ -1.89
ATG38YLR211C YJR154WP47181 346 aa3.23□□□□□ -1.89
ATG38YLR211C LCL3P53153 274 aa3.23□□□□□ -1.89
ATG38YLR211C BSC5P53755 489 aa3.23□□□□□ -1.89
ATG38YLR211C YDL057WQ07379 328 aa3.23□□□□□ -1.89
ATG38YLR211C YER078W-AQ3E7A2 54 aa3.23□□□□□ -1.89
ATG38YLR211C CAR1P00812 333 aaKnown RBP3.22□□□□□ -1.89
ATG38YLR211C MF(ALPHA)1P01149 165 aa3.22□□□□□ -1.89
ATG38YLR211C MRP13P12686 339 aa3.22□□□□□ -1.89
ATG38YLR211C ATR1P13090 542 aa3.22□□□□□ -1.89
ATG38YLR211C TUL1P36096 758 aa3.22□□□□□ -1.89
ATG38YLR211C RFS1P38234 210 aaKnown RBP3.22□□□□□ -1.89
ATG38YLR211C CCT6P39079 546 aa3.22□□□□□ -1.89
ATG38YLR211C SHO1P40073 367 aa3.22□□□□□ -1.89
ATG38YLR211C YGR126WP53274 230 aa3.22□□□□□ -1.89
ATG38YLR211C MRPL51Q06090 140 aaPredicted RBP3.22□□□□□ -1.89
ATG38YLR211C SKM1Q12469 655 aa3.22□□□□□ -1.89
ATG38YLR211C CTF3Q12748 733 aa3.22□□□□□ -1.89
ATG38YLR211C YCK1P23291 538 aa3.21□□□□□ -1.9
ATG38YLR211C YCR007CP25354 239 aa3.21□□□□□ -1.9
ATG38YLR211C LDB16P25587 256 aa3.21□□□□□ -1.9
ATG38YLR211C POL4P25615 582 aa3.21□□□□□ -1.9
ATG38YLR211C UBP11P36026 717 aa3.21□□□□□ -1.9
ATG38YLR211C MRPL4P36517 319 aa3.21□□□□□ -1.9
ATG38YLR211C SHE10P53075 577 aa3.21□□□□□ -1.9
ATG38YLR211C YGR127WP53275 312 aa3.21□□□□□ -1.9
ATG38YLR211C MEP3P53390 489 aa3.21□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 21 ms