RNA–Protein interactions for RNA: YKR028W

SAP190, Transcript of Protein that forms a complex with the Sit4p protein phosphatase, yeast

Gene SAP190, Length 3,102 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SAP190	YKR028W	UBX4	P54730	416 aa		2.24	□□□□□ -2.05
SAP190	YKR028W	YMR178W	Q03219	274 aa	Known RBP	2.24	□□□□□ -2.05
SAP190	YKR028W	JIP5	Q06214	492 aa	Predicted RBP	2.24	□□□□□ -2.05
SAP190	YKR028W	YLR177W	Q06251	628 aa		2.24	□□□□□ -2.05
SAP190	YKR028W	PSR1	Q07800	427 aa		2.24	□□□□□ -2.05
SAP190	YKR028W	RSB1	Q08417	382 aa		2.24	□□□□□ -2.05
SAP190	YKR028W	SAM4	Q08985	325 aa	Known RBP	2.24	□□□□□ -2.05
SAP190	YKR028W	MSB2	P32334	1306 aa		2.23	□□□□□ -2.05
SAP190	YKR028W	SUC2	P00724	532 aa		2.23	□□□□□ -2.05
SAP190	YKR028W	TEF1	P02994	458 aa	Known RBP	2.23	□□□□□ -2.05
SAP190	YKR028W	MSF1	P08425	469 aa		2.23	□□□□□ -2.05
SAP190	YKR028W	YKR104W	P0CE69	306 aa		2.23	□□□□□ -2.05
SAP190	YKR028W	RSR1	P13856	272 aa		2.23	□□□□□ -2.05
SAP190	YKR028W	SCL1	P21243	252 aa	Known RBP	2.23	□□□□□ -2.05
SAP190	YKR028W	YSR3	P23501	404 aa		2.23	□□□□□ -2.05
SAP190	YKR028W	DCC1	P25559	380 aa		2.23	□□□□□ -2.05
SAP190	YKR028W	RFA2	P26754	273 aa	Known RBP	2.23	□□□□□ -2.05
SAP190	YKR028W	PET112	P33893	541 aa		2.23	□□□□□ -2.05
SAP190	YKR028W	OAF3	P36023	863 aa		2.23	□□□□□ -2.05
SAP190	YKR028W	YHI9	P38765	294 aa		2.23	□□□□□ -2.05
SAP190	YKR028W	YHR045W	P38775	560 aa		2.23	□□□□□ -2.05
SAP190	YKR028W	BAT1	P38891	393 aa	Known RBP	2.23	□□□□□ -2.05
SAP190	YKR028W	CTK3	P46963	296 aa	Predicted RBP	2.23	□□□□□ -2.05
SAP190	YKR028W	COQ5	P49017	307 aa		2.23	□□□□□ -2.05
SAP190	YKR028W	TNA1	P53322	534 aa		2.23	□□□□□ -2.05
SAP190	YKR028W	IST1	P53843	298 aa	Predicted RBP	2.23	□□□□□ -2.05
SAP190	YKR028W	DOS2	P54858	310 aa		2.23	□□□□□ -2.05
SAP190	YKR028W	TRS31	Q03337	283 aa		2.23	□□□□□ -2.05
SAP190	YKR028W	USA1	Q03714	838 aa		2.23	□□□□□ -2.05
SAP190	YKR028W	VHS1	Q03785	461 aa		2.23	□□□□□ -2.05
SAP190	YKR028W	RRN11	Q04712	507 aa		2.23	□□□□□ -2.05
SAP190	YKR028W	ACM1	Q08981	209 aa		2.23	□□□□□ -2.05
SAP190	YKR028W	VPS68	Q12016	184 aa		2.23	□□□□□ -2.05
SAP190	YKR028W	RGS2	Q99188	309 aa		2.23	□□□□□ -2.05
SAP190	YKR028W	FAB1	P34756	2278 aa		2.23	□□□□□ -2.05
SAP190	YKR028W	CMD1	P06787	147 aa	Known RBP	2.23	□□□□□ -2.05
SAP190	YKR028W	RPL11A	P0C0W9	174 aa	Known RBP	2.23	□□□□□ -2.05
SAP190	YKR028W	SEC63	P14906	663 aa		2.23	□□□□□ -2.05
SAP190	YKR028W	POL30	P15873	258 aa	Known RBP	2.23	□□□□□ -2.05
SAP190	YKR028W	ARF2	P19146	181 aa	Known RBP	2.23	□□□□□ -2.05
SAP190	YKR028W	TRX2	P22803	104 aa	Known RBP	2.23	□□□□□ -2.05
SAP190	YKR028W	YCL068C	P25593	260 aa		2.23	□□□□□ -2.05
SAP190	YKR028W	SSH4	P32343	579 aa		2.23	□□□□□ -2.05
SAP190	YKR028W	PHA2	P32452	334 aa		2.23	□□□□□ -2.05
SAP190	YKR028W	YBR032W	P38223	100 aa		2.23	□□□□□ -2.05
SAP190	YKR028W	YHR182W	P38870	785 aa		2.23	□□□□□ -2.05
SAP190	YKR028W	MEF2	P39677	819 aa		2.23	□□□□□ -2.05
SAP190	YKR028W	MET12	P46151	657 aa		2.23	□□□□□ -2.05
SAP190	YKR028W	PAN2	P53010	1115 aa	Predicted RBP	2.23	□□□□□ -2.05
SAP190	YKR028W	MPS2	P53159	387 aa		2.23	□□□□□ -2.05
SAP190	YKR028W	NMA2	P53204	395 aa		2.23	□□□□□ -2.05
SAP190	YKR028W	SLM2	P53955	656 aa		2.23	□□□□□ -2.05
SAP190	YKR028W	NHP10	Q03435	203 aa		2.23	□□□□□ -2.05
SAP190	YKR028W	YMR160W	Q03823	816 aa		2.23	□□□□□ -2.05
SAP190	YKR028W	OMS1	Q06668	471 aa		2.23	□□□□□ -2.05
SAP190	YKR028W	RUD3	Q12234	484 aa	Known RBP	2.23	□□□□□ -2.05
SAP190	YKR028W	RRP42	Q12277	265 aa	Predicted RBP	2.23	□□□□□ -2.05
SAP190	YKR028W	SPE4	Q12455	300 aa		2.23	□□□□□ -2.05
SAP190	YKR028W	RPL11B	Q3E757	174 aa	Predicted RBP	2.23	□□□□□ -2.05
SAP190	YKR028W	SRV2	P17555	526 aa	Known RBP	2.22	□□□□□ -2.05
SAP190	YKR028W	LOS1	P33418	1100 aa	Predicted RBP	2.22	□□□□□ -2.05
SAP190	YKR028W	YKL100C	P34248	587 aa		2.22	□□□□□ -2.05
SAP190	YKR028W	MUP3	P38734	546 aa		2.22	□□□□□ -2.05
SAP190	YKR028W	LRP1	P38801	184 aa	Known RBP	2.22	□□□□□ -2.05
SAP190	YKR028W	ASN2	P49090	572 aa	Known RBP	2.22	□□□□□ -2.05
SAP190	YKR028W	TYW3	P53177	273 aa		2.22	□□□□□ -2.05
SAP190	YKR028W	SHY1	P53266	389 aa		2.22	□□□□□ -2.05
SAP190	YKR028W	YML053C	Q04978	212 aa		2.22	□□□□□ -2.05
SAP190	YKR028W	BCH1	Q05029	724 aa		2.22	□□□□□ -2.05
SAP190	YKR028W	FAR8	Q05040	523 aa		2.22	□□□□□ -2.05
SAP190	YKR028W	YET3	Q07451	203 aa		2.22	□□□□□ -2.05
SAP190	YKR028W	PLB3	Q08108	686 aa		2.22	□□□□□ -2.05
SAP190	YKR028W	PEX15	Q08215	383 aa		2.22	□□□□□ -2.05
SAP190	YKR028W	TMA46	Q12000	345 aa	Known RBP	2.22	□□□□□ -2.05
SAP190	YKR028W	SMF3	Q12078	473 aa	Predicted RBP	2.22	□□□□□ -2.05
SAP190	YKR028W	GNT1	Q12096	491 aa		2.22	□□□□□ -2.05
SAP190	YKR028W	AHA1	Q12449	350 aa	Known RBP	2.22	□□□□□ -2.05
SAP190	YKR028W	HSH49	Q99181	213 aa	Predicted RBP	2.22	□□□□□ -2.05
SAP190	YKR028W	SPS1	P08458	490 aa		2.22	□□□□□ -2.05
SAP190	YKR028W	SSC1	P0CS90	654 aa	Known RBP	2.22	□□□□□ -2.05
SAP190	YKR028W	HSP26	P15992	214 aa	Known RBP RIP-Chip data	2.22	□□□□□ -2.05	not detected
SAP190	YKR028W	LYP1	P32487	611 aa		2.22	□□□□□ -2.05
SAP190	YKR028W	TFB1	P32776	642 aa		2.22	□□□□□ -2.05
SAP190	YKR028W	RPS1A	P33442	255 aa	Known RBP	2.22	□□□□□ -2.05
SAP190	YKR028W	RIM2	P38127	377 aa		2.22	□□□□□ -2.05
SAP190	YKR028W	AIM3	P38266	947 aa	Known RBP	2.22	□□□□□ -2.05
SAP190	YKR028W	CCZ1	P38273	704 aa		2.22	□□□□□ -2.05
SAP190	YKR028W	YBP1	P38315	674 aa		2.22	□□□□□ -2.05
SAP190	YKR028W	UBA4	P38820	440 aa		2.22	□□□□□ -2.05
SAP190	YKR028W	ALG8	P40351	577 aa		2.22	□□□□□ -2.05
SAP190	YKR028W	TEL2	P53038	688 aa		2.22	□□□□□ -2.05
SAP190	YKR028W	TAF6	P53040	516 aa		2.22	□□□□□ -2.05
SAP190	YKR028W	ZIP2	P53061	704 aa		2.22	□□□□□ -2.05
SAP190	YKR028W	BOL2	P53082	120 aa		2.22	□□□□□ -2.05
SAP190	YKR028W	YGR012W	P53206	393 aa		2.22	□□□□□ -2.05
SAP190	YKR028W	RHO3	Q00245	231 aa	Known RBP	2.22	□□□□□ -2.05
SAP190	YKR028W	VPS16	Q03308	798 aa		2.22	□□□□□ -2.05
SAP190	YKR028W	SPO20	Q04359	397 aa		2.22	□□□□□ -2.05
SAP190	YKR028W	XYL2	Q07993	356 aa		2.22	□□□□□ -2.05
SAP190	YKR028W	PIN2	Q12057	282 aa		2.22	□□□□□ -2.05

Retrieved 100 of 5,963 RNA–protein pairs in 27.1 ms