RNA–Protein interactions for RNA: YKL184W

SPE1, Transcript of Ornithine decarboxylase, yeastyeast

Gene SPE1, Length 1,401 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPE1YKL184W MCM10P32354 571 aa2.58□□□□□ -2
SPE1YKL184W YOX1P34161 385 aa2.58□□□□□ -2
SPE1YKL184W SIP2P34164 415 aaKnown RBP2.58□□□□□ -2
SPE1YKL184W AUR1P36107 401 aaPredicted RBP2.58□□□□□ -2
SPE1YKL184W YBL029WP38201 376 aa2.58□□□□□ -2
SPE1YKL184W SIP4P46954 829 aa2.58□□□□□ -2
SPE1YKL184W RHO4Q00246 291 aa2.58□□□□□ -2
SPE1YKL184W RAD30Q04049 632 aa2.58□□□□□ -2
SPE1YKL184W ENT4Q07872 247 aa2.58□□□□□ -2
SPE1YKL184W APE1P14904 514 aa2.57□□□□□ -2
SPE1YKL184W MCK1P21965 375 aaKnown RBP2.57□□□□□ -2
SPE1YKL184W IMG1P25626 169 aa2.57□□□□□ -2
SPE1YKL184W CHS3P29465 1165 aa2.57□□□□□ -2
SPE1YKL184W SPC110P32380 944 aa2.57□□□□□ -2
SPE1YKL184W YBL055CP34220 418 aaPredicted RBP2.57□□□□□ -2
SPE1YKL184W RPL32P38061 130 aaKnown RBP2.57□□□□□ -2
SPE1YKL184W SNG1P46950 547 aa2.57□□□□□ -2
SPE1YKL184W ALT2P52892 507 aa2.57□□□□□ -2
SPE1YKL184W YGR126WP53274 230 aa2.57□□□□□ -2
SPE1YKL184W EFM6P53970 246 aa2.57□□□□□ -2
SPE1YKL184W ENT1Q12518 454 aa2.57□□□□□ -2
SPE1YKL184W MF(ALPHA)1P01149 165 aa2.56□□□□□ -2
SPE1YKL184W RPL20AP0CX23 172 aaKnown RBP2.56□□□□□ -2
SPE1YKL184W RPL20BP0CX24 172 aaPredicted RBP2.56□□□□□ -2
SPE1YKL184W SGF29P25554 259 aa2.56□□□□□ -2
SPE1YKL184W YBR144CP34215 104 aa2.56□□□□□ -2
SPE1YKL184W MTR2P34232 184 aaKnown RBP2.56□□□□□ -2
SPE1YKL184W MTC4P38335 694 aaKnown RBP2.56□□□□□ -2
SPE1YKL184W OSH3P38713 996 aaKnown RBP2.56□□□□□ -2
SPE1YKL184W YEL068CP39977 110 aa2.56□□□□□ -2
SPE1YKL184W FMP10P40098 244 aa2.56□□□□□ -2
SPE1YKL184W YGL242CP53066 181 aa2.56□□□□□ -2
SPE1YKL184W SVL3Q03088 825 aaKnown RBP2.56□□□□□ -2
SPE1YKL184W SMA2Q04658 369 aa2.56□□□□□ -2
SPE1YKL184W EXO70P19658 623 aa2.55□□□□□ -2
SPE1YKL184W SAN1P22470 610 aa2.55□□□□□ -2
SPE1YKL184W RPS2P25443 254 aaKnown RBP2.55□□□□□ -2
SPE1YKL184W PUP3P25451 205 aaKnown RBP2.55□□□□□ -2
SPE1YKL184W YIH1P25637 258 aa2.55□□□□□ -2
SPE1YKL184W SSE2P32590 693 aaKnown RBP2.55□□□□□ -2
SPE1YKL184W CIN4P39110 191 aa2.55□□□□□ -2
SPE1YKL184W RPR2P40571 144 aa2.55□□□□□ -2
SPE1YKL184W COS10P52924 374 aa2.55□□□□□ -2
SPE1YKL184W MEP3P53390 489 aa2.55□□□□□ -2
SPE1YKL184W BOR1P53838 576 aa2.55□□□□□ -2
SPE1YKL184W VIP1Q06685 1146 aaKnown RBP2.55□□□□□ -2
SPE1YKL184W YDL057WQ07379 328 aa2.55□□□□□ -2
SPE1YKL184W LUC7Q07508 261 aaPredicted RBP2.55□□□□□ -2
SPE1YKL184W FMP40Q08968 688 aaPredicted RBP2.55□□□□□ -2
SPE1YKL184W HUA2Q12134 243 aa2.55□□□□□ -2
SPE1YKL184W AYT1Q12226 474 aa2.55□□□□□ -2
SPE1YKL184W ARD1P07347 238 aaPredicted RBP2.54□□□□□ -2
SPE1YKL184W AGA1P32323 725 aa2.54□□□□□ -2
SPE1YKL184W SAC6P32599 642 aaKnown RBP2.54□□□□□ -2
SPE1YKL184W LOS1P33418 1100 aaPredicted RBP2.54□□□□□ -2
SPE1YKL184W UBP11P36026 717 aa2.54□□□□□ -2
SPE1YKL184W MUD2P36084 527 aaKnown RBP2.54□□□□□ -2
SPE1YKL184W NUP133P36161 1157 aa2.54□□□□□ -2
SPE1YKL184W AVT5P38176 459 aa2.54□□□□□ -2
SPE1YKL184W NAB3P38996 802 aaKnown RBP RIP-Chip data2.54□□□□□ -2not detected
SPE1YKL184W VPS52P39904 641 aa2.54□□□□□ -2
SPE1YKL184W TMA108P40462 946 aa2.54□□□□□ -2
SPE1YKL184W LYS14P40971 790 aa2.54□□□□□ -2
SPE1YKL184W LYS4P49367 693 aaPredicted RBP2.54□□□□□ -2
SPE1YKL184W DSD1P53095 428 aa2.54□□□□□ -2
SPE1YKL184W YMR087WQ04299 284 aa2.54□□□□□ -2
SPE1YKL184W MRPL51Q06090 140 aaPredicted RBP2.54□□□□□ -2
SPE1YKL184W VPS74Q06385 345 aa2.54□□□□□ -2
SPE1YKL184W OPY2Q06810 360 aa2.54□□□□□ -2
SPE1YKL184W YDR056CQ12025 205 aa2.54□□□□□ -2
SPE1YKL184W YLL056CQ12177 298 aa2.54□□□□□ -2
SPE1YKL184W YDL009CQ12210 107 aa2.54□□□□□ -2
SPE1YKL184W REV1P12689 985 aa2.53□□□□□ -2
SPE1YKL184W ATR1P13090 542 aa2.53□□□□□ -2
SPE1YKL184W KGD1P20967 1014 aaKnown RBP2.53□□□□□ -2
SPE1YKL184W ATS1P31386 333 aa2.53□□□□□ -2
SPE1YKL184W TUL1P36096 758 aa2.53□□□□□ -2
SPE1YKL184W SHO1P40073 367 aa2.53□□□□□ -2
SPE1YKL184W DPH1P40487 425 aaKnown RBP2.53□□□□□ -2
SPE1YKL184W MKT1P40850 830 aaKnown RBP2.53□□□□□ -2
SPE1YKL184W IDP2P41939 412 aa2.53□□□□□ -2
SPE1YKL184W YPI1P43587 155 aa2.53□□□□□ -2
SPE1YKL184W YSA1Q01976 231 aa2.53□□□□□ -2
SPE1YKL184W YML037CQ03703 340 aa2.53□□□□□ -2
SPE1YKL184W SYO1Q07395 620 aa2.53□□□□□ -2
SPE1YKL184W RTT109Q07794 436 aa2.53□□□□□ -2
SPE1YKL184W TLG2Q08144 397 aa2.53□□□□□ -2
SPE1YKL184W SYN8P31377 255 aa2.52□□□□□ -2.01
SPE1YKL184W PMU1P36069 295 aa2.52□□□□□ -2.01
SPE1YKL184W ERP2P39704 215 aa2.52□□□□□ -2.01
SPE1YKL184W ALG8P40351 577 aa2.52□□□□□ -2.01
SPE1YKL184W ELP2P42935 788 aa2.52□□□□□ -2.01
SPE1YKL184W YJR154WP47181 346 aa2.52□□□□□ -2.01
SPE1YKL184W BUD32P53323 261 aa2.52□□□□□ -2.01
SPE1YKL184W IRC15Q02733 499 aa2.52□□□□□ -2.01
SPE1YKL184W RLI1Q03195 608 aaKnown RBP2.52□□□□□ -2.01
SPE1YKL184W IVY1Q04934 453 aa2.52□□□□□ -2.01
SPE1YKL184W LSP1Q12230 341 aaKnown RBP2.52□□□□□ -2.01
SPE1YKL184W YBR126W-AQ8TGU7 68 aa2.52□□□□□ -2.01
SPE1YKL184W AAC3P18238 307 aa2.51□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 23.2 ms