RNA–Protein interactions for RNA: YKL027W

TCD2, Transcript of tRNA threonylcarbamoyladenosine dehydratase, yeastyeast

Gene TCD2, Length 1,344 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TCD2YKL027W GAS3Q03655 524 aa11.39□□□□□ -0.59
TCD2YKL027W YDR056CQ12025 205 aa11.39□□□□□ -0.59
TCD2YKL027W BRR1Q99177 341 aaPredicted RBP11.39□□□□□ -0.59
TCD2YKL027W EXO70P19658 623 aa11.38□□□□□ -0.59
TCD2YKL027W NPP1P25353 742 aa11.38□□□□□ -0.59
TCD2YKL027W SDH3P33421 198 aa11.38□□□□□ -0.59
TCD2YKL027W GDT1P38301 280 aaPredicted RBP11.38□□□□□ -0.59
TCD2YKL027W YPT35P38815 214 aaKnown RBP11.38□□□□□ -0.59
TCD2YKL027W ELO1P39540 310 aa11.38□□□□□ -0.59
TCD2YKL027W SCS2P40075 244 aaKnown RBP11.38□□□□□ -0.59
TCD2YKL027W YJR154WP47181 346 aa11.38□□□□□ -0.59
TCD2YKL027W RNR4P49723 345 aaKnown RBP11.38□□□□□ -0.59
TCD2YKL027W YNL260CP53846 198 aa11.38□□□□□ -0.59
TCD2YKL027W VHS1Q03785 461 aa11.38□□□□□ -0.59
TCD2YKL027W YMR034CQ05131 434 aaPredicted RBP11.38□□□□□ -0.59
TCD2YKL027W THI73Q07904 523 aa11.38□□□□□ -0.59
TCD2YKL027W AI3P03877 415 aa11.37□□□□□ -0.59
TCD2YKL027W PRP16P15938 1071 aaPredicted RBP11.37□□□□□ -0.59
TCD2YKL027W ARG1P22768 420 aa11.37□□□□□ -0.59
TCD2YKL027W PPH21P23594 369 aa11.37□□□□□ -0.59
TCD2YKL027W MAP2P38174 421 aaKnown RBP11.37□□□□□ -0.59
TCD2YKL027W YAL037WP39728 267 aa11.37□□□□□ -0.59
TCD2YKL027W GCD10P41814 478 aa11.37□□□□□ -0.59
TCD2YKL027W SSU1P41930 458 aa11.37□□□□□ -0.59
TCD2YKL027W YJR030CP47101 745 aa11.37□□□□□ -0.59
TCD2YKL027W ROT1Q03691 256 aa11.37□□□□□ -0.59
TCD2YKL027W GPB1Q08886 897 aa11.37□□□□□ -0.59
TCD2YKL027W ATG29Q12092 213 aa11.37□□□□□ -0.59
TCD2YKL027W YLR049CQ12110 428 aa11.37□□□□□ -0.59
TCD2YKL027W SUL2Q12325 893 aa11.37□□□□□ -0.59
TCD2YKL027W SRN2Q99176 213 aa11.37□□□□□ -0.59
TCD2YKL027W RED1P14291 827 aa11.36□□□□□ -0.59
TCD2YKL027W BUB2P26448 306 aaPredicted RBP11.36□□□□□ -0.59
TCD2YKL027W CBF5P33322 483 aaKnown RBP RIP-Chip data11.36□□□□□ -0.59not detected
TCD2YKL027W TRM7P38238 310 aaKnown RBP11.36□□□□□ -0.59
TCD2YKL027W INM1P38710 295 aa11.36□□□□□ -0.59
TCD2YKL027W NDE1P40215 560 aa11.36□□□□□ -0.59
TCD2YKL027W FKH2P41813 862 aa11.36□□□□□ -0.59
TCD2YKL027W ZIM17P42844 174 aa11.36□□□□□ -0.59
TCD2YKL027W GCV1P48015 400 aa11.36□□□□□ -0.59
TCD2YKL027W COS12P53053 380 aa11.36□□□□□ -0.59
TCD2YKL027W CUS2P53830 285 aaPredicted RBP11.36□□□□□ -0.59
TCD2YKL027W FMN1Q03778 218 aa11.36□□□□□ -0.59
TCD2YKL027W RAD34Q06665 692 aa11.36□□□□□ -0.59
TCD2YKL027W RRP36Q12481 300 aaPredicted RBP11.36□□□□□ -0.59
TCD2YKL027W CAR1P00812 333 aaKnown RBP11.35□□□□□ -0.59
TCD2YKL027W COS2P0CX12 379 aa11.35□□□□□ -0.59
TCD2YKL027W COS3P0CX13 379 aa11.35□□□□□ -0.59
TCD2YKL027W TOA1P32773 286 aa11.35□□□□□ -0.59
TCD2YKL027W MGM101P32787 269 aaKnown RBP11.35□□□□□ -0.59
TCD2YKL027W PIM1P36775 1133 aa11.35□□□□□ -0.59
TCD2YKL027W COS4P43542 379 aa11.35□□□□□ -0.59
TCD2YKL027W TY4A-JP47023 414 aa11.35□□□□□ -0.59
TCD2YKL027W YNL010WP53981 241 aaKnown RBP11.35□□□□□ -0.59
TCD2YKL027W LGE1Q02796 332 aaKnown RBP11.35□□□□□ -0.59
TCD2YKL027W IOC2Q12072 812 aa11.35□□□□□ -0.59
TCD2YKL027W STT4P37297 1900 aa11.35□□□□□ -0.59
TCD2YKL027W RMA1P36001 430 aaKnown RBP11.35□□□□□ -0.59
TCD2YKL027W ERP5P38819 212 aa11.35□□□□□ -0.59
TCD2YKL027W MET18P40469 1032 aa11.35□□□□□ -0.59
TCD2YKL027W SUN4P53616 420 aa11.35□□□□□ -0.59
TCD2YKL027W AAT1Q01802 451 aa11.35□□□□□ -0.59
TCD2YKL027W PFA4Q12006 378 aa11.35□□□□□ -0.59
TCD2YKL027W YPR011CQ12251 326 aa11.35□□□□□ -0.59
TCD2YKL027W CAN1P04817 590 aa11.34□□□□□ -0.59
TCD2YKL027W DBR1P24309 405 aaKnown RBP11.34□□□□□ -0.59
TCD2YKL027W RFC3P38629 340 aa11.34□□□□□ -0.59
TCD2YKL027W ARN1P38731 627 aa11.34□□□□□ -0.59
TCD2YKL027W FRT2P39734 528 aa11.34□□□□□ -0.59
TCD2YKL027W EGD1Q02642 157 aaKnown RBP11.34□□□□□ -0.59
TCD2YKL027W YDR444WQ04093 687 aa11.34□□□□□ -0.59
TCD2YKL027W ESA1Q08649 445 aa11.34□□□□□ -0.59
TCD2YKL027W RTK1Q12100 620 aaPredicted RBP11.34□□□□□ -0.59
TCD2YKL027W RGT2Q12300 763 aa11.34□□□□□ -0.59
TCD2YKL027W HRP1Q99383 534 aaKnown RBP11.34□□□□□ -0.59
TCD2YKL027W TRP3P00937 484 aa11.33□□□□□ -0.6
TCD2YKL027W PRP4P20053 465 aaKnown RBP11.33□□□□□ -0.6
TCD2YKL027W NTR2P36118 322 aaPredicted RBP11.33□□□□□ -0.6
TCD2YKL027W BMT2P38278 337 aa11.33□□□□□ -0.6
TCD2YKL027W AXL2P38928 823 aa11.33□□□□□ -0.6
TCD2YKL027W YEN1P40028 759 aa11.33□□□□□ -0.6
TCD2YKL027W YFR020WP43600 232 aa11.33□□□□□ -0.6
TCD2YKL027W CIS3P47001 227 aa11.33□□□□□ -0.6
TCD2YKL027W NAS6P50086 228 aa11.33□□□□□ -0.6
TCD2YKL027W RHO3Q00245 231 aaKnown RBP11.33□□□□□ -0.6
TCD2YKL027W YML096WQ04489 525 aa11.33□□□□□ -0.6
TCD2YKL027W RIB2Q12362 591 aaKnown RBP11.33□□□□□ -0.6
TCD2YKL027W LAT1P12695 482 aaKnown RBP11.32□□□□□ -0.6
TCD2YKL027W RDS2P19541 446 aaKnown RBP11.32□□□□□ -0.6
TCD2YKL027W PET309P32522 965 aaPredicted RBP11.32□□□□□ -0.6
TCD2YKL027W SIP2P34164 415 aaKnown RBP11.32□□□□□ -0.6
TCD2YKL027W YPS6P40583 537 aa11.32□□□□□ -0.6
TCD2YKL027W SEC27P41811 889 aaKnown RBP11.32□□□□□ -0.6
TCD2YKL027W CCT7P42943 550 aaKnown RBP11.32□□□□□ -0.6
TCD2YKL027W MET12P46151 657 aa11.32□□□□□ -0.6
TCD2YKL027W SUM1P46676 1062 aa11.32□□□□□ -0.6
TCD2YKL027W YGL176CP46945 554 aa11.32□□□□□ -0.6
TCD2YKL027W YPT32P51996 222 aaKnown RBP11.32□□□□□ -0.6
TCD2YKL027W YGR053CP53234 283 aa11.32□□□□□ -0.6
TCD2YKL027W REX2P54964 269 aaKnown RBP11.32□□□□□ -0.6
Retrieved 100 of 5,963 RNA–protein pairs in 18.6 ms