RNA–Protein interactions for RNA: YJR042W

NUP85, Transcript of Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC), yeastyeast

Gene NUP85, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP85YJR042W YMR124WP39523 943 aaKnown RBP3.75□□□□□ -1.81
NUP85YJR042W PXA1P41909 870 aa3.75□□□□□ -1.81
NUP85YJR042W INP52P50942 1183 aa3.75□□□□□ -1.81
NUP85YJR042W YGR066CP53242 292 aa3.75□□□□□ -1.81
NUP85YJR042W TWF1P53250 332 aa3.75□□□□□ -1.81
NUP85YJR042W MAP1Q01662 387 aaKnown RBP RIP-Chip data3.75□□□□□ -1.81not detected
NUP85YJR042W ACL4Q03771 387 aa3.75□□□□□ -1.81
NUP85YJR042W YDR179W-AQ03983 463 aa3.75□□□□□ -1.81
NUP85YJR042W PPM1Q04081 328 aa3.75□□□□□ -1.81
NUP85YJR042W DOT1Q04089 582 aaKnown RBP3.75□□□□□ -1.81
NUP85YJR042W GEP3Q08622 556 aa3.75□□□□□ -1.81
NUP85YJR042W TGS1Q12052 315 aa3.75□□□□□ -1.81
NUP85YJR042W TFB5Q3E7C1 72 aaPredicted RBP3.75□□□□□ -1.81
NUP85YJR042W SCH9P11792 824 aaKnown RBP3.74□□□□□ -1.81
NUP85YJR042W ELO2P25358 347 aa3.74□□□□□ -1.81
NUP85YJR042W NNK1P36003 928 aa3.74□□□□□ -1.81
NUP85YJR042W MRPL4P36517 319 aa3.74□□□□□ -1.81
NUP85YJR042W KTR3P38130 404 aaPredicted RBP3.74□□□□□ -1.81
NUP85YJR042W SEC31P38968 1273 aaKnown RBP3.74□□□□□ -1.81
NUP85YJR042W GIP4P39732 760 aa3.74□□□□□ -1.81
NUP85YJR042W SSO2P39926 295 aa3.74□□□□□ -1.81
NUP85YJR042W ZRG8P40021 1076 aa3.74□□□□□ -1.81
NUP85YJR042W GET2P40056 285 aa3.74□□□□□ -1.81
NUP85YJR042W GTS1P40956 396 aa3.74□□□□□ -1.81
NUP85YJR042W IMO32P53219 342 aa3.74□□□□□ -1.81
NUP85YJR042W KTR6P54070 446 aa3.74□□□□□ -1.81
NUP85YJR042W INA17Q02888 182 aa3.74□□□□□ -1.81
NUP85YJR042W ALE1Q08548 619 aa3.74□□□□□ -1.81
NUP85YJR042W OSW2Q12202 724 aa3.74□□□□□ -1.81
NUP85YJR042W NTO1Q12311 748 aa3.74□□□□□ -1.81
NUP85YJR042W YOR012WQ12351 137 aa3.74□□□□□ -1.81
NUP85YJR042W ARG81P05085 880 aa3.74□□□□□ -1.81
NUP85YJR042W CBP1P07252 654 aa3.74□□□□□ -1.81
NUP85YJR042W RPL3P14126 387 aaKnown RBP3.74□□□□□ -1.81
NUP85YJR042W PRP2P20095 876 aaPredicted RBP3.74□□□□□ -1.81
NUP85YJR042W SAG1P20840 650 aa3.74□□□□□ -1.81
NUP85YJR042W DAL81P21657 970 aa3.74□□□□□ -1.81
NUP85YJR042W EMC1P25574 760 aa3.74□□□□□ -1.81
NUP85YJR042W YCL068CP25593 260 aa3.74□□□□□ -1.81
NUP85YJR042W SRB4P32569 687 aa3.74□□□□□ -1.81
NUP85YJR042W COT1P32798 439 aa3.74□□□□□ -1.81
NUP85YJR042W SKI2P35207 1287 aaKnown RBP RIP-Chip data3.74□□□□□ -1.81not detected
NUP85YJR042W YKL023WP36103 277 aaKnown RBP3.74□□□□□ -1.81
NUP85YJR042W ECM4P36156 370 aa3.74□□□□□ -1.81
NUP85YJR042W BZZ1P38822 633 aa3.74□□□□□ -1.81
NUP85YJR042W SAK1P38990 1142 aa3.74□□□□□ -1.81
NUP85YJR042W MSS2P40990 351 aa3.74□□□□□ -1.81
NUP85YJR042W SWP82P43554 623 aa3.74□□□□□ -1.81
NUP85YJR042W TOM22P49334 152 aa3.74□□□□□ -1.81
NUP85YJR042W IMD4P50094 524 aaKnown RBP3.74□□□□□ -1.81
NUP85YJR042W MRPS35P53292 345 aa3.74□□□□□ -1.81
NUP85YJR042W DSL1P53847 754 aa3.74□□□□□ -1.81
NUP85YJR042W PNG1Q02890 363 aa3.74□□□□□ -1.81
NUP85YJR042W CRF1Q04930 467 aa3.74□□□□□ -1.81
NUP85YJR042W YLR297WQ05899 129 aa3.74□□□□□ -1.81
NUP85YJR042W WHI4Q07655 649 aaKnown RBP3.74□□□□□ -1.81
NUP85YJR042W YLL007CQ07799 665 aa3.74□□□□□ -1.81
NUP85YJR042W OSM1P21375 501 aaKnown RBP3.73□□□□□ -1.81
NUP85YJR042W APA2P22108 325 aa3.73□□□□□ -1.81
NUP85YJR042W STE14P32584 239 aa3.73□□□□□ -1.81
NUP85YJR042W KES1P35844 434 aaKnown RBP3.73□□□□□ -1.81
NUP85YJR042W HXT14P42833 540 aa3.73□□□□□ -1.81
NUP85YJR042W YFR018CP43599 363 aa3.73□□□□□ -1.81
NUP85YJR042W YGR054WP53235 642 aaKnown RBP3.73□□□□□ -1.81
NUP85YJR042W COQ6P53318 479 aa3.73□□□□□ -1.81
NUP85YJR042W YNL134CP53912 376 aaKnown RBP3.73□□□□□ -1.81
NUP85YJR042W SLU7Q02775 382 aaKnown RBP3.73□□□□□ -1.81
NUP85YJR042W YMR102CQ03177 834 aa3.73□□□□□ -1.81
NUP85YJR042W MRPS17Q03246 237 aaPredicted RBP3.73□□□□□ -1.81
NUP85YJR042W TPP1Q03796 238 aa3.73□□□□□ -1.81
NUP85YJR042W SMC5Q08204 1093 aa3.73□□□□□ -1.81
NUP85YJR042W TAF3Q12297 353 aa3.73□□□□□ -1.81
NUP85YJR042W YIL002W-AQ3E7Z5 69 aa3.73□□□□□ -1.81
NUP85YJR042W HRP1Q99383 534 aaKnown RBP3.73□□□□□ -1.81
NUP85YJR042W FAS2P19097 1887 aaKnown RBP3.73□□□□□ -1.81
NUP85YJR042W MRP13P12686 339 aa3.72□□□□□ -1.81
NUP85YJR042W GCD2P12754 651 aaPredicted RBP3.72□□□□□ -1.81
NUP85YJR042W PRX1P34227 261 aaKnown RBP3.72□□□□□ -1.81
NUP85YJR042W GLG1P36143 616 aa3.72□□□□□ -1.81
NUP85YJR042W MRPL10P36520 322 aa3.72□□□□□ -1.81
NUP85YJR042W ATP3P38077 311 aaKnown RBP3.72□□□□□ -1.81
NUP85YJR042W WSS1P38838 269 aa3.72□□□□□ -1.81
NUP85YJR042W YTA12P40341 825 aa3.72□□□□□ -1.81
NUP85YJR042W SDP1P40479 209 aa3.72□□□□□ -1.81
NUP85YJR042W YJL132WP47014 750 aa3.72□□□□□ -1.81
NUP85YJR042W MPS2P53159 387 aa3.72□□□□□ -1.81
NUP85YJR042W LSC2P53312 427 aa3.72□□□□□ -1.81
NUP85YJR042W RTT102P53330 157 aa3.72□□□□□ -1.81
NUP85YJR042W YDR239CQ03780 787 aa3.72□□□□□ -1.81
NUP85YJR042W RPN9Q04062 393 aaKnown RBP3.72□□□□□ -1.81
NUP85YJR042W YMR074CQ04773 145 aa3.72□□□□□ -1.81
NUP85YJR042W YPL150WQ12152 901 aa3.72□□□□□ -1.81
NUP85YJR042W YBL111CQ3E7Y5 667 aa3.72□□□□□ -1.81
NUP85YJR042W ECM3Q99252 613 aa3.72□□□□□ -1.81
NUP85YJR042W RNR1P21524 888 aaKnown RBP3.72□□□□□ -1.81
NUP85YJR042W MSS1P32559 526 aaPredicted RBP3.72□□□□□ -1.81
NUP85YJR042W SRB5P32585 307 aa3.72□□□□□ -1.81
NUP85YJR042W ASH1P34233 588 aa3.72□□□□□ -1.81
NUP85YJR042W MRPL37P36532 105 aa3.72□□□□□ -1.81
NUP85YJR042W MCX1P38323 520 aaPredicted RBP3.72□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 17.4 ms