RNA–Protein interactions for RNA: YIL017C

VID28, Transcript of GID Complex subunit, serves as adaptor for regulatory subunit Vid24p, yeast

Gene VID28, Length 2,766 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VID28	YIL017C	IPT1	P38954	527 aa		4.05	□□□□□ -1.76
VID28	YIL017C	RGA1	P39083	1007 aa		4.05	□□□□□ -1.76
VID28	YIL017C	SPF1	P39986	1215 aa	Known RBP	4.05	□□□□□ -1.76
VID28	YIL017C	UTP7	P40055	554 aa	Known RBP	4.05	□□□□□ -1.76
VID28	YIL017C	CCT8	P47079	568 aa	Known RBP	4.05	□□□□□ -1.76
VID28	YIL017C	MTO1	P53070	669 aa		4.05	□□□□□ -1.76
VID28	YIL017C	UBX4	P54730	416 aa		4.05	□□□□□ -1.76
VID28	YIL017C	ACS1	Q01574	713 aa		4.05	□□□□□ -1.76
VID28	YIL017C	PRM6	Q04705	352 aa		4.05	□□□□□ -1.76
VID28	YIL017C	YDR222W	Q04925	415 aa		4.05	□□□□□ -1.76
VID28	YIL017C	ATG38	Q05789	226 aa	Known RBP	4.05	□□□□□ -1.76
VID28	YIL017C	DIB1	Q06819	143 aa	Predicted RBP	4.05	□□□□□ -1.76
VID28	YIL017C	AKR2	Q12013	749 aa		4.05	□□□□□ -1.76
VID28	YIL017C	WRS1	Q12109	432 aa	Known RBP	4.05	□□□□□ -1.76
VID28	YIL017C	YIL002W-A	Q3E7Z5	69 aa		4.05	□□□□□ -1.76
VID28	YIL017C	YBR298C-A	Q8TGK4	73 aa		4.05	□□□□□ -1.76
VID28	YIL017C	CAR1	P00812	333 aa	Known RBP	4.04	□□□□□ -1.76
VID28	YIL017C	APA2	P22108	325 aa		4.04	□□□□□ -1.76
VID28	YIL017C	MRPL8	P22353	238 aa		4.04	□□□□□ -1.76
VID28	YIL017C	HIS7	P33734	552 aa	Known RBP	4.04	□□□□□ -1.76
VID28	YIL017C	POP7	P38291	140 aa		4.04	□□□□□ -1.76
VID28	YIL017C	SRP72	P38688	640 aa	Known RBP	4.04	□□□□□ -1.76
VID28	YIL017C	CYC2	P38909	366 aa		4.04	□□□□□ -1.76
VID28	YIL017C	YAT2	P40017	923 aa		4.04	□□□□□ -1.76
VID28	YIL017C	CSM2	P40465	213 aa		4.04	□□□□□ -1.76
VID28	YIL017C	DIE2	P50076	525 aa		4.04	□□□□□ -1.76
VID28	YIL017C	PYK2	P52489	506 aa	Known RBP	4.04	□□□□□ -1.76
VID28	YIL017C	RTA1	P53047	317 aa		4.04	□□□□□ -1.76
VID28	YIL017C	DBP6	P53734	629 aa	Known RBP	4.04	□□□□□ -1.76
VID28	YIL017C	YAF9	P53930	226 aa		4.04	□□□□□ -1.76
VID28	YIL017C	SMA1	Q02651	245 aa		4.04	□□□□□ -1.76
VID28	YIL017C	CWC21	Q03375	135 aa	Known RBP	4.04	□□□□□ -1.76
VID28	YIL017C	EFR3	Q03653	782 aa	Known RBP	4.04	□□□□□ -1.76
VID28	YIL017C	SSY1	Q03770	852 aa		4.04	□□□□□ -1.76
VID28	YIL017C	HSP31	Q04432	237 aa		4.04	□□□□□ -1.76
VID28	YIL017C	ECM38	Q05902	660 aa	Predicted RBP	4.04	□□□□□ -1.76
VID28	YIL017C	CRN1	Q06440	651 aa		4.04	□□□□□ -1.76
VID28	YIL017C	ISA1	Q07821	250 aa	Predicted RBP	4.04	□□□□□ -1.76
VID28	YIL017C	MUM3	Q08750	479 aa		4.04	□□□□□ -1.76
VID28	YIL017C	YPL199C	Q08954	240 aa		4.04	□□□□□ -1.76
VID28	YIL017C	PCK1	P10963	549 aa		4.04	□□□□□ -1.76
VID28	YIL017C	AEP2	P22136	580 aa		4.04	□□□□□ -1.76
VID28	YIL017C	MSN1	P22148	382 aa		4.04	□□□□□ -1.76
VID28	YIL017C	YSC84	P32793	468 aa		4.04	□□□□□ -1.76
VID28	YIL017C	UGP1	P32861	499 aa	Known RBP	4.04	□□□□□ -1.76
VID28	YIL017C	SDS22	P36047	338 aa		4.04	□□□□□ -1.76
VID28	YIL017C	MRPL3	P36516	390 aa		4.04	□□□□□ -1.76
VID28	YIL017C	GPX2	P38143	162 aa		4.04	□□□□□ -1.76
VID28	YIL017C	SWC5	P38326	303 aa		4.04	□□□□□ -1.76
VID28	YIL017C	YHK8	P38776	514 aa		4.04	□□□□□ -1.76
VID28	YIL017C	SSN3	P39073	555 aa		4.04	□□□□□ -1.76
VID28	YIL017C	PTI1	P39927	425 aa	Predicted RBP	4.04	□□□□□ -1.76
VID28	YIL017C	GID8	P40208	455 aa		4.04	□□□□□ -1.76
VID28	YIL017C	NTA1	P40354	457 aa		4.04	□□□□□ -1.76
VID28	YIL017C	BUD13	P46947	266 aa	Predicted RBP	4.04	□□□□□ -1.76
VID28	YIL017C	SRB7	P47822	140 aa		4.04	□□□□□ -1.76
VID28	YIL017C	BIO4	P53630	237 aa		4.04	□□□□□ -1.76
VID28	YIL017C	COG5	P53951	403 aa		4.04	□□□□□ -1.76
VID28	YIL017C	MPS1	P54199	764 aa		4.04	□□□□□ -1.76
VID28	YIL017C	NUP116	Q02630	1113 aa		4.04	□□□□□ -1.76
VID28	YIL017C	FDC1	Q03034	503 aa		4.04	□□□□□ -1.76
VID28	YIL017C	YMR099C	Q03161	297 aa	Known RBP	4.04	□□□□□ -1.76
VID28	YIL017C	SNX41	Q04053	625 aa		4.04	□□□□□ -1.76
VID28	YIL017C	UFO1	Q04511	668 aa		4.04	□□□□□ -1.76
VID28	YIL017C	ARV1	Q06541	321 aa		4.04	□□□□□ -1.76
VID28	YIL017C	THI20	Q08224	551 aa		4.04	□□□□□ -1.76
VID28	YIL017C	CUE5	Q08412	411 aa	Known RBP	4.04	□□□□□ -1.76
VID28	YIL017C	RSB1	Q08417	382 aa		4.04	□□□□□ -1.76
VID28	YIL017C	THP3	Q12049	470 aa	Known RBP	4.04	□□□□□ -1.76
VID28	YIL017C	RPN6	Q12377	434 aa		4.04	□□□□□ -1.76
VID28	YIL017C	DGK1	Q12382	290 aa		4.04	□□□□□ -1.76
VID28	YIL017C	RRD2	Q12461	358 aa		4.04	□□□□□ -1.76
VID28	YIL017C	RRP12	Q12754	1228 aa	Known RBP	4.04	□□□□□ -1.76
VID28	YIL017C	YOL159C-A	Q3E769	90 aa		4.04	□□□□□ -1.76
VID28	YIL017C	RIB3	Q99258	208 aa		4.04	□□□□□ -1.76
VID28	YIL017C	GCN4	P03069	281 aa		4.03	□□□□□ -1.76
VID28	YIL017C	MET17	P06106	444 aa		4.03	□□□□□ -1.76
VID28	YIL017C	ADE5,7	P07244	802 aa	Known RBP	4.03	□□□□□ -1.76
VID28	YIL017C	APA1	P16550	321 aa	Known RBP	4.03	□□□□□ -1.76
VID28	YIL017C	ATG22	P25568	528 aa		4.03	□□□□□ -1.76
VID28	YIL017C	PGS1	P25578	521 aa		4.03	□□□□□ -1.76
VID28	YIL017C	HEM12	P32347	362 aa	Predicted RBP	4.03	□□□□□ -1.76
VID28	YIL017C	RIM1	P32445	135 aa	Known RBP	4.03	□□□□□ -1.76
VID28	YIL017C	NAB2	P32505	525 aa	Known RBP RIP-Chip data	4.03	□□□□□ -1.76	not detected
VID28	YIL017C	ATG19	P35193	415 aa		4.03	□□□□□ -1.76
VID28	YIL017C	YKL023W	P36103	277 aa	Known RBP	4.03	□□□□□ -1.76
VID28	YIL017C	ERV15	P38312	142 aa		4.03	□□□□□ -1.76
VID28	YIL017C	RRP8	P38961	392 aa	Known RBP	4.03	□□□□□ -1.76
VID28	YIL017C	DUN1	P39009	513 aa		4.03	□□□□□ -1.76
VID28	YIL017C	YIL077C	P40508	320 aa		4.03	□□□□□ -1.76
VID28	YIL017C	YKE4	P40544	346 aa		4.03	□□□□□ -1.76
VID28	YIL017C	LSB6	P42951	607 aa		4.03	□□□□□ -1.76
VID28	YIL017C	IRC6	P43615	237 aa		4.03	□□□□□ -1.76
VID28	YIL017C	FAR3	P46671	204 aa		4.03	□□□□□ -1.76
VID28	YIL017C	PTK2	P47116	818 aa	Known RBP	4.03	□□□□□ -1.76
VID28	YIL017C	SAM37	P50110	327 aa		4.03	□□□□□ -1.76
VID28	YIL017C	NBP1	P52919	319 aa	Predicted RBP	4.03	□□□□□ -1.76
VID28	YIL017C	POP6	P53218	158 aa		4.03	□□□□□ -1.76
VID28	YIL017C	MNT4	P53745	580 aa		4.03	□□□□□ -1.76
VID28	YIL017C	HDA1	P53973	706 aa		4.03	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 31.5 ms