RNA–Protein interactions for RNA: YHR089C

GAR1, Transcript of Protein component of the H/ACA snoRNP pseudouridylase complex, yeastyeast

Gene GAR1, Length 618 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GAR1YHR089C YAL037WP39728 267 aa13.69□□□□□ -0.22
GAR1YHR089C ZIM17P42844 174 aa13.69□□□□□ -0.22
GAR1YHR089C YJR149WP47177 404 aa13.69□□□□□ -0.22
GAR1YHR089C GCV1P48015 400 aa13.69□□□□□ -0.22
GAR1YHR089C MDM34P53083 459 aa13.69□□□□□ -0.22
GAR1YHR089C MRM2P53123 320 aa13.69□□□□□ -0.22
GAR1YHR089C YDR444WQ04093 687 aa13.69□□□□□ -0.22
GAR1YHR089C RAD34Q06665 692 aa13.69□□□□□ -0.22
GAR1YHR089C YDL121CQ07541 149 aa13.69□□□□□ -0.22
GAR1YHR089C NOB1Q08444 459 aaKnown RBP13.69□□□□□ -0.22
GAR1YHR089C RRP42Q12277 265 aaPredicted RBP13.69□□□□□ -0.22
GAR1YHR089C MGM101P32787 269 aaKnown RBP13.68□□□□□ -0.22
GAR1YHR089C PIM1P36775 1133 aa13.68□□□□□ -0.22
GAR1YHR089C UTP9P38882 575 aaKnown RBP13.68□□□□□ -0.22
GAR1YHR089C YPS6P40583 537 aa13.68□□□□□ -0.22
GAR1YHR089C YFR020WP43600 232 aa13.68□□□□□ -0.22
GAR1YHR089C CIS3P47001 227 aa13.68□□□□□ -0.22
GAR1YHR089C YJR154WP47181 346 aa13.68□□□□□ -0.22
GAR1YHR089C SUB1P54000 292 aaKnown RBP13.68□□□□□ -0.22
GAR1YHR089C YPL109CQ02981 657 aa13.68□□□□□ -0.22
GAR1YHR089C VPS16Q03308 798 aa13.68□□□□□ -0.22
GAR1YHR089C VHS1Q03785 461 aa13.68□□□□□ -0.22
GAR1YHR089C YMR034CQ05131 434 aaPredicted RBP13.68□□□□□ -0.22
GAR1YHR089C SUL2Q12325 893 aa13.68□□□□□ -0.22
GAR1YHR089C MDM35O60200 86 aa13.67□□□□□ -0.22
GAR1YHR089C RED1P14291 827 aa13.67□□□□□ -0.22
GAR1YHR089C TRM1P15565 570 aaKnown RBP13.67□□□□□ -0.22
GAR1YHR089C NPP1P25353 742 aa13.67□□□□□ -0.22
GAR1YHR089C SHU2P38957 223 aa13.67□□□□□ -0.22
GAR1YHR089C UBP6P43593 499 aaKnown RBP13.67□□□□□ -0.22
GAR1YHR089C COS12P53053 380 aa13.67□□□□□ -0.22
GAR1YHR089C NOP19P53317 196 aaPredicted RBP13.67□□□□□ -0.22
GAR1YHR089C CTK1Q03957 528 aaKnown RBP13.67□□□□□ -0.22
GAR1YHR089C YML096WQ04489 525 aa13.67□□□□□ -0.22
GAR1YHR089C HRP1Q99383 534 aaKnown RBP13.67□□□□□ -0.22
GAR1YHR089C ACC1Q00955 2233 aaKnown RBP13.67□□□□□ -0.22
GAR1YHR089C AI3P03877 415 aa13.66□□□□□ -0.22
GAR1YHR089C RDS2P19541 446 aaKnown RBP13.66□□□□□ -0.22
GAR1YHR089C ARG1P22768 420 aa13.66□□□□□ -0.22
GAR1YHR089C INM1P38710 295 aa13.66□□□□□ -0.22
GAR1YHR089C MRX1P40050 688 aa13.66□□□□□ -0.22
GAR1YHR089C GCD10P41814 478 aa13.66□□□□□ -0.22
GAR1YHR089C YJR030CP47101 745 aa13.66□□□□□ -0.22
GAR1YHR089C YDR056CQ12025 205 aa13.66□□□□□ -0.22
GAR1YHR089C YLR049CQ12110 428 aa13.66□□□□□ -0.22
GAR1YHR089C CBF5P33322 483 aaKnown RBP RIP-Chip data13.65□□□□□ -0.22not detected
GAR1YHR089C RMA1P36001 430 aaKnown RBP13.65□□□□□ -0.22
GAR1YHR089C TRM7P38238 310 aaKnown RBP13.65□□□□□ -0.22
GAR1YHR089C SCS2P40075 244 aaKnown RBP13.65□□□□□ -0.22
GAR1YHR089C NDE1P40215 560 aa13.65□□□□□ -0.22
GAR1YHR089C FKH2P41813 862 aa13.65□□□□□ -0.22
GAR1YHR089C ATG29Q12092 213 aa13.65□□□□□ -0.22
GAR1YHR089C RTK1Q12100 620 aaPredicted RBP13.65□□□□□ -0.22
GAR1YHR089C EXO70P19658 623 aa13.64□□□□□ -0.23
GAR1YHR089C BUB2P26448 306 aaPredicted RBP13.64□□□□□ -0.23
GAR1YHR089C COX13P32799 129 aa13.64□□□□□ -0.23
GAR1YHR089C HEK2P38199 381 aaKnown RBP RIP-Chip data13.64□□□□□ -0.23not detected
GAR1YHR089C YNL260CP53846 198 aa13.64□□□□□ -0.23
GAR1YHR089C ATG34Q12292 412 aa13.64□□□□□ -0.23
GAR1YHR089C STT4P37297 1900 aa13.63□□□□□ -0.23
GAR1YHR089C COS2P0CX12 379 aa13.63□□□□□ -0.23
GAR1YHR089C COS3P0CX13 379 aa13.63□□□□□ -0.23
GAR1YHR089C ERV46P39727 415 aa13.63□□□□□ -0.23
GAR1YHR089C MET18P40469 1032 aa13.63□□□□□ -0.23
GAR1YHR089C SEC27P41811 889 aaKnown RBP13.63□□□□□ -0.23
GAR1YHR089C COS4P43542 379 aa13.63□□□□□ -0.23
GAR1YHR089C HXT16P47185 567 aa13.63□□□□□ -0.23
GAR1YHR089C HXT15P54854 567 aa13.63□□□□□ -0.23
GAR1YHR089C RHO3Q00245 231 aaKnown RBP13.63□□□□□ -0.23
GAR1YHR089C FMN1Q03778 218 aa13.63□□□□□ -0.23
GAR1YHR089C IOC2Q12072 812 aa13.63□□□□□ -0.23
GAR1YHR089C RGT2Q12300 763 aa13.63□□□□□ -0.23
GAR1YHR089C GPR1Q12361 961 aa13.63□□□□□ -0.23
GAR1YHR089C RIB2Q12362 591 aaKnown RBP13.63□□□□□ -0.23
GAR1YHR089C SRN2Q99176 213 aa13.63□□□□□ -0.23
GAR1YHR089C IRA2P19158 3079 aa13.63□□□□□ -0.23
GAR1YHR089C DBR1P24309 405 aaKnown RBP13.62□□□□□ -0.23
GAR1YHR089C AXL2P38928 823 aa13.62□□□□□ -0.23
GAR1YHR089C LTP1P40347 161 aa13.62□□□□□ -0.23
GAR1YHR089C YGL176CP46945 554 aa13.62□□□□□ -0.23
GAR1YHR089C RNR4P49723 345 aaKnown RBP13.62□□□□□ -0.23
GAR1YHR089C SGF73P53165 657 aa13.62□□□□□ -0.23
GAR1YHR089C CUS2P53830 285 aaPredicted RBP13.62□□□□□ -0.23
GAR1YHR089C YNL010WP53981 241 aaKnown RBP13.62□□□□□ -0.23
GAR1YHR089C EGD1Q02642 157 aaKnown RBP13.62□□□□□ -0.23
GAR1YHR089C EAF1Q06337 982 aa13.62□□□□□ -0.23
GAR1YHR089C OPT2Q06593 877 aa13.62□□□□□ -0.23
GAR1YHR089C YPL245WQ12179 454 aaKnown RBP13.62□□□□□ -0.23
GAR1YHR089C YPR011CQ12251 326 aa13.62□□□□□ -0.23
GAR1YHR089C MHT1Q12525 324 aa13.62□□□□□ -0.23
GAR1YHR089C CAR1P00812 333 aaKnown RBP13.61□□□□□ -0.23
GAR1YHR089C SNF5P18480 905 aa13.61□□□□□ -0.23
GAR1YHR089C PET309P32522 965 aaPredicted RBP13.61□□□□□ -0.23
GAR1YHR089C NTR2P36118 322 aaPredicted RBP13.61□□□□□ -0.23
GAR1YHR089C GGC1P38988 300 aa13.61□□□□□ -0.23
GAR1YHR089C CEM1P39525 442 aa13.61□□□□□ -0.23
GAR1YHR089C YPT32P51996 222 aaKnown RBP13.61□□□□□ -0.23
GAR1YHR089C YMR111CQ04461 462 aaPredicted RBP13.61□□□□□ -0.23
GAR1YHR089C GLO2Q05584 274 aa13.61□□□□□ -0.23
GAR1YHR089C ESA1Q08649 445 aa13.61□□□□□ -0.23
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms