RNA–Protein interactions for RNA: YHR035W

NEL1, Transcript of Activator of Sar1p GTPase activity, yeast

Gene NEL1, Length 1,893 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NEL1	YHR035W	RPS2	P25443	254 aa	Known RBP	3.02	□□□□□ -1.93
NEL1	YHR035W	NOC2	P39744	710 aa	Known RBP	3.02	□□□□□ -1.93
NEL1	YHR035W	IKS1	P47042	667 aa		3.02	□□□□□ -1.93
NEL1	YHR035W	DUO1	P53168	247 aa	Known RBP	3.02	□□□□□ -1.93
NEL1	YHR035W	COG4	Q06096	861 aa		3.02	□□□□□ -1.93
NEL1	YHR035W	YPL272C	Q08984	517 aa		3.02	□□□□□ -1.93
NEL1	YHR035W	SEC62	P21825	274 aa		3.01	□□□□□ -1.93
NEL1	YHR035W	SSE2	P32590	693 aa	Known RBP	3.01	□□□□□ -1.93
NEL1	YHR035W	NFU1	P32860	256 aa		3.01	□□□□□ -1.93
NEL1	YHR035W	VPS17	P32913	551 aa		3.01	□□□□□ -1.93
NEL1	YHR035W	ECM15	P35195	104 aa		3.01	□□□□□ -1.93
NEL1	YHR035W	RPL32	P38061	130 aa	Known RBP	3.01	□□□□□ -1.93
NEL1	YHR035W	SAM50	P53969	484 aa		3.01	□□□□□ -1.93
NEL1	YHR035W	YKU80	Q04437	629 aa		3.01	□□□□□ -1.93
NEL1	YHR035W	FMP40	Q08968	688 aa	Predicted RBP	3.01	□□□□□ -1.93
NEL1	YHR035W	SPE4	Q12455	300 aa		3.01	□□□□□ -1.93
NEL1	YHR035W	YBR144C	P34215	104 aa		3.01	□□□□□ -1.93
NEL1	YHR035W	UBP11	P36026	717 aa		3.01	□□□□□ -1.93
NEL1	YHR035W	YTA12	P40341	825 aa		3.01	□□□□□ -1.93
NEL1	YHR035W	SNG1	P46950	547 aa		3.01	□□□□□ -1.93
NEL1	YHR035W	RHO4	Q00246	291 aa		3.01	□□□□□ -1.93
NEL1	YHR035W	THI20	Q08224	551 aa		3.01	□□□□□ -1.93
NEL1	YHR035W	SDH5	Q08230	162 aa		3.01	□□□□□ -1.93
NEL1	YHR035W	NOP58	Q12499	511 aa	Known RBP	3.01	□□□□□ -1.93
NEL1	YHR035W	MRS3	P10566	314 aa		3	□□□□□ -1.93
NEL1	YHR035W	SUI2	P20459	304 aa	Known RBP	3	□□□□□ -1.93
NEL1	YHR035W	SGF29	P25554	259 aa		3	□□□□□ -1.93
NEL1	YHR035W	YKL023W	P36103	277 aa	Known RBP	3	□□□□□ -1.93
NEL1	YHR035W	APT1	P49435	187 aa	Known RBP	3	□□□□□ -1.93
NEL1	YHR035W	YGR126W	P53274	230 aa		3	□□□□□ -1.93
NEL1	YHR035W	SHR3	Q02774	210 aa		3	□□□□□ -1.93
NEL1	YHR035W	NGL3	Q03210	505 aa		3	□□□□□ -1.93
NEL1	YHR035W	GLO2	Q05584	274 aa		3	□□□□□ -1.93
NEL1	YHR035W	PEP5	P12868	1029 aa		2.99	□□□□□ -1.93
NEL1	YHR035W	DAL5	P15365	543 aa		2.99	□□□□□ -1.93
NEL1	YHR035W	PAH1	P32567	862 aa		2.99	□□□□□ -1.93
NEL1	YHR035W	SAC6	P32599	642 aa	Known RBP	2.99	□□□□□ -1.93
NEL1	YHR035W	CIN4	P39110	191 aa		2.99	□□□□□ -1.93
NEL1	YHR035W	DHH1	P39517	506 aa	Known RBP	2.99	□□□□□ -1.93
NEL1	YHR035W	MSC1	Q03104	513 aa		2.99	□□□□□ -1.93
NEL1	YHR035W	YMR087W	Q04299	284 aa		2.99	□□□□□ -1.93
NEL1	YHR035W	YDL057W	Q07379	328 aa		2.99	□□□□□ -1.93
NEL1	YHR035W	CDC45	Q08032	650 aa		2.99	□□□□□ -1.93
NEL1	YHR035W	YDR056C	Q12025	205 aa		2.99	□□□□□ -1.93
NEL1	YHR035W	PPT2	Q12036	173 aa		2.99	□□□□□ -1.93
NEL1	YHR035W	ERP4	Q12450	207 aa		2.99	□□□□□ -1.93
NEL1	YHR035W	ENT1	Q12518	454 aa		2.99	□□□□□ -1.93
NEL1	YHR035W	YBR298C-A	Q8TGK4	73 aa		2.99	□□□□□ -1.93
NEL1	YHR035W	SGS1	P35187	1447 aa		2.99	□□□□□ -1.93
NEL1	YHR035W	SGV1	P23293	657 aa	Known RBP	2.99	□□□□□ -1.93
NEL1	YHR035W	MDM31	P38880	579 aa		2.99	□□□□□ -1.93
NEL1	YHR035W	DSD1	P53095	428 aa		2.99	□□□□□ -1.93
NEL1	YHR035W	BUD32	P53323	261 aa		2.99	□□□□□ -1.93
NEL1	YHR035W	EST1	P17214	699 aa	Predicted RBP	2.98	□□□□□ -1.93
NEL1	YHR035W	CSM2	P40465	213 aa		2.98	□□□□□ -1.93
NEL1	YHR035W	MPP10	P47083	593 aa	Known RBP	2.98	□□□□□ -1.93
NEL1	YHR035W	SCW10	Q04951	389 aa		2.98	□□□□□ -1.93
NEL1	YHR035W	CYB2	P00175	591 aa		2.97	□□□□□ -1.93
NEL1	YHR035W	SEC53	P07283	254 aa	Known RBP	2.97	□□□□□ -1.93
NEL1	YHR035W	APE1	P14904	514 aa		2.97	□□□□□ -1.93
NEL1	YHR035W	RPN12	P32496	274 aa		2.97	□□□□□ -1.93
NEL1	YHR035W	NDC1	P32500	655 aa		2.97	□□□□□ -1.93
NEL1	YHR035W	PTR2	P32901	601 aa		2.97	□□□□□ -1.93
NEL1	YHR035W	SIP2	P34164	415 aa	Known RBP	2.97	□□□□□ -1.93
NEL1	YHR035W	OSH3	P38713	996 aa	Known RBP	2.97	□□□□□ -1.93
NEL1	YHR035W	CCT6	P39079	546 aa		2.97	□□□□□ -1.93
NEL1	YHR035W	FLC2	P39719	783 aa		2.97	□□□□□ -1.93
NEL1	YHR035W	ALT2	P52892	507 aa		2.97	□□□□□ -1.93
NEL1	YHR035W	IPI3	P53877	555 aa		2.97	□□□□□ -1.93
NEL1	YHR035W	RPM2	Q02773	1202 aa		2.97	□□□□□ -1.93
NEL1	YHR035W	HCR1	Q05775	265 aa	Known RBP	2.97	□□□□□ -1.93
NEL1	YHR035W	NMD4	Q12129	218 aa		2.97	□□□□□ -1.93
NEL1	YHR035W	SEM1	O94742	89 aa		2.96	□□□□□ -1.93
NEL1	YHR035W	RPL15A	P05748	204 aa	Known RBP	2.96	□□□□□ -1.93
NEL1	YHR035W	MRP13	P12686	339 aa		2.96	□□□□□ -1.93
NEL1	YHR035W	MTF1	P14908	341 aa	Known RBP	2.96	□□□□□ -1.93
NEL1	YHR035W	AAC3	P18238	307 aa		2.96	□□□□□ -1.93
NEL1	YHR035W	ART10	P18634	518 aa	Known RBP	2.96	□□□□□ -1.93
NEL1	YHR035W	SAN1	P22470	610 aa		2.96	□□□□□ -1.93
NEL1	YHR035W	SEF1	P34228	1148 aa		2.96	□□□□□ -1.93
NEL1	YHR035W	KRE9	P39005	276 aa		2.96	□□□□□ -1.93
NEL1	YHR035W	VPS52	P39904	641 aa		2.96	□□□□□ -1.93
NEL1	YHR035W	NOP16	P40007	231 aa	Known RBP	2.96	□□□□□ -1.93
NEL1	YHR035W	ALG5	P40350	334 aa		2.96	□□□□□ -1.93
NEL1	YHR035W	RTT101	P47050	842 aa		2.96	□□□□□ -1.93
NEL1	YHR035W	VID30	P53076	958 aa		2.96	□□□□□ -1.93
NEL1	YHR035W	YEH1	Q07804	573 aa		2.96	□□□□□ -1.93
NEL1	YHR035W	NCE102	Q12207	173 aa	RIP-Chip data	2.96	□□□□□ -1.93	not detected
NEL1	YHR035W	CAR1	P00812	333 aa	Known RBP	2.96	□□□□□ -1.94
NEL1	YHR035W	PRP16	P15938	1071 aa	Predicted RBP	2.96	□□□□□ -1.94
NEL1	YHR035W	BUD14	P27637	709 aa		2.96	□□□□□ -1.94
NEL1	YHR035W	TIF3	P34167	436 aa	Known RBP	2.96	□□□□□ -1.94
NEL1	YHR035W	EBP2	P36049	427 aa	Known RBP	2.96	□□□□□ -1.94
NEL1	YHR035W	YHR210C	P38893	341 aa		2.96	□□□□□ -1.94
NEL1	YHR035W	YJR154W	P47181	346 aa		2.96	□□□□□ -1.94
NEL1	YHR035W	GIS2	P53849	153 aa	Known RBP RIP-Chip data	2.96	□□□□□ -1.94	not detected
NEL1	YHR035W	SET6	Q12529	373 aa		2.96	□□□□□ -1.94
NEL1	YHR035W	HSH49	Q99181	213 aa	Predicted RBP	2.96	□□□□□ -1.94
NEL1	YHR035W	YPT6	Q99260	215 aa		2.96	□□□□□ -1.94
NEL1	YHR035W	GFD2	P25370	566 aa	Known RBP	2.95	□□□□□ -1.94

Retrieved 100 of 5,963 RNA–protein pairs in 37.6 ms