RNA–Protein interactions for RNA: YHR004C

NEM1, Transcript of Probable catalytic subunit of Nem1p-Spo7p phosphatase holoenzyme, yeast

Gene NEM1, Length 1,341 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NEM1	YHR004C	ASE1	P50275	885 aa		3.94	□□□□□ -1.78
NEM1	YHR004C	RBA50	Q04418	439 aa		3.94	□□□□□ -1.78
NEM1	YHR004C	PAL1	Q05518	499 aa	Known RBP	3.94	□□□□□ -1.78
NEM1	YHR004C	CDC45	Q08032	650 aa		3.94	□□□□□ -1.78
NEM1	YHR004C	CDC16	P09798	840 aa		3.93	□□□□□ -1.78
NEM1	YHR004C	NAT1	P12945	854 aa	Known RBP	3.93	□□□□□ -1.78
NEM1	YHR004C	CKA1	P15790	372 aa		3.93	□□□□□ -1.78
NEM1	YHR004C	VMA2	P16140	517 aa	Known RBP	3.93	□□□□□ -1.78
NEM1	YHR004C	CLB4	P24871	460 aa		3.93	□□□□□ -1.78
NEM1	YHR004C	CDC15	P27636	974 aa		3.93	□□□□□ -1.78
NEM1	YHR004C	PTR2	P32901	601 aa		3.93	□□□□□ -1.78
NEM1	YHR004C	TIF5	P38431	405 aa	Known RBP	3.93	□□□□□ -1.78
NEM1	YHR004C	RPR2	P40571	144 aa		3.93	□□□□□ -1.78
NEM1	YHR004C	IDP2	P41939	412 aa		3.93	□□□□□ -1.78
NEM1	YHR004C	RPT6	Q01939	405 aa	Known RBP	3.93	□□□□□ -1.78
NEM1	YHR004C	VID22	Q05934	901 aa		3.93	□□□□□ -1.78
NEM1	YHR004C	PGC1	Q08959	321 aa		3.93	□□□□□ -1.78
NEM1	YHR004C	HUA2	Q12134	243 aa		3.93	□□□□□ -1.78
NEM1	YHR004C	SKM1	Q12469	655 aa		3.93	□□□□□ -1.78
NEM1	YHR004C	TY1B-A	O13527	1196 aa	Known RBP	3.92	□□□□□ -1.78
NEM1	YHR004C	GCN4	P03069	281 aa		3.92	□□□□□ -1.78
NEM1	YHR004C	NCP1	P16603	691 aa	Known RBP	3.92	□□□□□ -1.78
NEM1	YHR004C	VPS17	P32913	551 aa		3.92	□□□□□ -1.78
NEM1	YHR004C	TEF4	P36008	412 aa	Known RBP	3.92	□□□□□ -1.78
NEM1	YHR004C	DPH1	P40487	425 aa	Known RBP	3.92	□□□□□ -1.78
NEM1	YHR004C	BSC5	P53755	489 aa		3.92	□□□□□ -1.78
NEM1	YHR004C	MOT3	P54785	490 aa	Known RBP	3.92	□□□□□ -1.78
NEM1	YHR004C	CIK1	Q01649	594 aa		3.92	□□□□□ -1.78
NEM1	YHR004C	APL4	Q12028	832 aa		3.92	□□□□□ -1.78
NEM1	YHR004C	HXK2	P04807	486 aa	Known RBP	3.91	□□□□□ -1.78
NEM1	YHR004C	MET8	P15807	274 aa		3.91	□□□□□ -1.78
NEM1	YHR004C	SUI2	P20459	304 aa	Known RBP	3.91	□□□□□ -1.78
NEM1	YHR004C	TRX1	P22217	103 aa	Known RBP	3.91	□□□□□ -1.78
NEM1	YHR004C	RPC53	P25441	422 aa		3.91	□□□□□ -1.78
NEM1	YHR004C	SNC1	P31109	117 aa		3.91	□□□□□ -1.78
NEM1	YHR004C	ATS1	P31386	333 aa		3.91	□□□□□ -1.78
NEM1	YHR004C	SRB5	P32585	307 aa		3.91	□□□□□ -1.78
NEM1	YHR004C	YEL045C	P32616	141 aa		3.91	□□□□□ -1.78
NEM1	YHR004C	MDL1	P33310	695 aa		3.91	□□□□□ -1.78
NEM1	YHR004C	CNS1	P33313	385 aa		3.91	□□□□□ -1.78
NEM1	YHR004C	YBR225W	P38321	900 aa		3.91	□□□□□ -1.78
NEM1	YHR004C	GDI1	P39958	451 aa	Known RBP	3.91	□□□□□ -1.78
NEM1	YHR004C	PUG1	P40100	303 aa		3.91	□□□□□ -1.78
NEM1	YHR004C	PKP1	P40530	394 aa		3.91	□□□□□ -1.78
NEM1	YHR004C	CTF18	P49956	741 aa		3.91	□□□□□ -1.78
NEM1	YHR004C	OGG1	P53397	376 aa	Predicted RBP	3.91	□□□□□ -1.78
NEM1	YHR004C	ARC35	P53731	342 aa	Known RBP	3.91	□□□□□ -1.78
NEM1	YHR004C	YMR111C	Q04461	462 aa	Predicted RBP	3.91	□□□□□ -1.78
NEM1	YHR004C	YDR286C	Q05530	114 aa		3.91	□□□□□ -1.78
NEM1	YHR004C	PSR1	Q07800	427 aa		3.91	□□□□□ -1.78
NEM1	YHR004C	SMF3	Q12078	473 aa	Predicted RBP	3.91	□□□□□ -1.78
NEM1	YHR004C	SEC53	P07283	254 aa	Known RBP	3.9	□□□□□ -1.79
NEM1	YHR004C	PRE8	P23639	250 aa		3.9	□□□□□ -1.79
NEM1	YHR004C	MNE1	P24720	663 aa		3.9	□□□□□ -1.79
NEM1	YHR004C	SGF29	P25554	259 aa		3.9	□□□□□ -1.79
NEM1	YHR004C	SPC110	P32380	944 aa		3.9	□□□□□ -1.79
NEM1	YHR004C	CBF2	P32504	956 aa		3.9	□□□□□ -1.79
NEM1	YHR004C	SAC6	P32599	642 aa	Known RBP	3.9	□□□□□ -1.79
NEM1	YHR004C	SRO77	P38163	1010 aa		3.9	□□□□□ -1.79
NEM1	YHR004C	MTC6	P38849	526 aa		3.9	□□□□□ -1.79
NEM1	YHR004C	RMD8	P43620	662 aa		3.9	□□□□□ -1.79
NEM1	YHR004C	FYV8	P46949	817 aa	Known RBP	3.9	□□□□□ -1.79
NEM1	YHR004C	TLG1	Q03322	224 aa		3.9	□□□□□ -1.79
NEM1	YHR004C	YMR155W	Q03795	547 aa		3.9	□□□□□ -1.79
NEM1	YHR004C	VTI1	Q04338	217 aa		3.9	□□□□□ -1.79
NEM1	YHR004C	SSK1	Q07084	712 aa		3.9	□□□□□ -1.79
NEM1	YHR004C	TRM8	Q12009	286 aa		3.9	□□□□□ -1.79
NEM1	YHR004C	PDH1	Q12428	516 aa	Known RBP	3.9	□□□□□ -1.79
NEM1	YHR004C	SEC62	P21825	274 aa		3.89	□□□□□ -1.79
NEM1	YHR004C	RRF1	P38771	230 aa		3.89	□□□□□ -1.79
NEM1	YHR004C	AXL2	P38928	823 aa		3.89	□□□□□ -1.79
NEM1	YHR004C	TIF4631	P39935	952 aa	Known RBP	3.89	□□□□□ -1.79
NEM1	YHR004C	MFB1	Q04922	465 aa		3.89	□□□□□ -1.79
NEM1	YHR004C	RRP9	Q06506	573 aa	Known RBP	3.89	□□□□□ -1.79
NEM1	YHR004C	NOP58	Q12499	511 aa	Known RBP	3.89	□□□□□ -1.79
NEM1	YHR004C	HXT1	P32465	570 aa		3.88	□□□□□ -1.79
NEM1	YHR004C	YBL029W	P38201	376 aa		3.88	□□□□□ -1.79
NEM1	YHR004C	LYS14	P40971	790 aa		3.88	□□□□□ -1.79
NEM1	YHR004C	YNR061C	P53747	219 aa		3.88	□□□□□ -1.79
NEM1	YHR004C	SAM50	P53969	484 aa		3.88	□□□□□ -1.79
NEM1	YHR004C	ZDS2	P54786	942 aa		3.88	□□□□□ -1.79
NEM1	YHR004C	RMT2	Q03305	412 aa		3.88	□□□□□ -1.79
NEM1	YHR004C	ARG3	P05150	338 aa		3.87	□□□□□ -1.79
NEM1	YHR004C	CDC24	P11433	854 aa	Predicted RBP	3.87	□□□□□ -1.79
NEM1	YHR004C	GLK1	P17709	500 aa	Known RBP	3.87	□□□□□ -1.79
NEM1	YHR004C	OLE1	P21147	510 aa	Known RBP	3.87	□□□□□ -1.79
NEM1	YHR004C	SPE2	P21182	396 aa		3.87	□□□□□ -1.79
NEM1	YHR004C	PWP1	P21304	576 aa	Known RBP	3.87	□□□□□ -1.79
NEM1	YHR004C	LCB1	P25045	558 aa	Known RBP	3.87	□□□□□ -1.79
NEM1	YHR004C	OCA4	P25366	362 aa		3.87	□□□□□ -1.79
NEM1	YHR004C	PEP3	P27801	918 aa		3.87	□□□□□ -1.79
NEM1	YHR004C	ERG3	P32353	365 aa		3.87	□□□□□ -1.79
NEM1	YHR004C	YBR138C	P38277	524 aa		3.87	□□□□□ -1.79
NEM1	YHR004C	UBA4	P38820	440 aa		3.87	□□□□□ -1.79
NEM1	YHR004C	PTH1	P38876	190 aa	Known RBP	3.87	□□□□□ -1.79
NEM1	YHR004C	NPR2	P39923	615 aa		3.87	□□□□□ -1.79
NEM1	YHR004C	LSM5	P40089	93 aa	Known RBP	3.87	□□□□□ -1.79
NEM1	YHR004C	SEC27	P41811	889 aa	Known RBP	3.87	□□□□□ -1.79
NEM1	YHR004C	CSL4	P53859	292 aa	Predicted RBP	3.87	□□□□□ -1.79
NEM1	YHR004C	TIM10	P87108	93 aa		3.87	□□□□□ -1.79

Retrieved 100 of 5,963 RNA–protein pairs in 24 ms