RNA–Protein interactions for RNA: YGR020C

VMA7, Transcript of Subunit F of the V1 peripheral membrane domain of V-ATPase, yeastyeast

Gene VMA7, Length 357 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA7YGR020C APT1P49435 187 aaKnown RBP3.74□□□□□ -1.81
VMA7YGR020C SHR3Q02774 210 aa3.74□□□□□ -1.81
VMA7YGR020C MSC1Q03104 513 aa3.74□□□□□ -1.81
VMA7YGR020C GLO2Q05584 274 aa3.74□□□□□ -1.81
VMA7YGR020C CDC45Q08032 650 aa3.74□□□□□ -1.81
VMA7YGR020C FMP40Q08968 688 aaPredicted RBP3.74□□□□□ -1.81
VMA7YGR020C NOP58Q12499 511 aaKnown RBP3.74□□□□□ -1.81
VMA7YGR020C PEP5P12868 1029 aa3.73□□□□□ -1.81
VMA7YGR020C UBP11P36026 717 aa3.73□□□□□ -1.81
VMA7YGR020C YKL023WP36103 277 aaKnown RBP3.73□□□□□ -1.81
VMA7YGR020C YGR126WP53274 230 aa3.73□□□□□ -1.81
VMA7YGR020C ENT1Q12518 454 aa3.73□□□□□ -1.81
VMA7YGR020C SUI2P20459 304 aaKnown RBP3.72□□□□□ -1.81
VMA7YGR020C SGF29P25554 259 aa3.72□□□□□ -1.81
VMA7YGR020C PAH1P32567 862 aa3.72□□□□□ -1.81
VMA7YGR020C MDM31P38880 579 aa3.72□□□□□ -1.81
VMA7YGR020C CIN4P39110 191 aa3.72□□□□□ -1.81
VMA7YGR020C DSD1P53095 428 aa3.72□□□□□ -1.81
VMA7YGR020C BUD32P53323 261 aa3.72□□□□□ -1.81
VMA7YGR020C RPM2Q02773 1202 aa3.72□□□□□ -1.81
VMA7YGR020C NGL3Q03210 505 aa3.72□□□□□ -1.81
VMA7YGR020C YMR087WQ04299 284 aa3.72□□□□□ -1.81
VMA7YGR020C HCR1Q05775 265 aaKnown RBP3.72□□□□□ -1.81
VMA7YGR020C PPT2Q12036 173 aa3.72□□□□□ -1.81
VMA7YGR020C YBR298C-AQ8TGK4 73 aa3.72□□□□□ -1.81
VMA7YGR020C SGV1P23293 657 aaKnown RBP3.71□□□□□ -1.82
VMA7YGR020C SAC6P32599 642 aaKnown RBP3.71□□□□□ -1.82
VMA7YGR020C SIP2P34164 415 aaKnown RBP3.71□□□□□ -1.82
VMA7YGR020C FLC2P39719 783 aa3.71□□□□□ -1.82
VMA7YGR020C CSM2P40465 213 aa3.71□□□□□ -1.82
VMA7YGR020C ALT2P52892 507 aa3.71□□□□□ -1.82
VMA7YGR020C SCW10Q04951 389 aa3.71□□□□□ -1.82
VMA7YGR020C YDL057WQ07379 328 aa3.71□□□□□ -1.82
VMA7YGR020C YDR056CQ12025 205 aa3.71□□□□□ -1.82
VMA7YGR020C NMD4Q12129 218 aa3.71□□□□□ -1.82
VMA7YGR020C SEM1O94742 89 aa3.7□□□□□ -1.82
VMA7YGR020C RPL15AP05748 204 aaKnown RBP3.7□□□□□ -1.82
VMA7YGR020C SEC53P07283 254 aaKnown RBP3.7□□□□□ -1.82
VMA7YGR020C MRP13P12686 339 aa3.7□□□□□ -1.82
VMA7YGR020C APE1P14904 514 aa3.7□□□□□ -1.82
VMA7YGR020C ART10P18634 518 aaKnown RBP3.7□□□□□ -1.82
VMA7YGR020C NDC1P32500 655 aa3.7□□□□□ -1.82
VMA7YGR020C TIF3P34167 436 aaKnown RBP3.7□□□□□ -1.82
VMA7YGR020C OSH3P38713 996 aaKnown RBP3.7□□□□□ -1.82
VMA7YGR020C CCT6P39079 546 aa3.7□□□□□ -1.82
VMA7YGR020C NOP16P40007 231 aaKnown RBP3.7□□□□□ -1.82
VMA7YGR020C YEH1Q07804 573 aa3.7□□□□□ -1.82
VMA7YGR020C NCE102Q12207 173 aaRIP-Chip data3.7□□□□□ -1.82not detected
VMA7YGR020C YPT6Q99260 215 aa3.7□□□□□ -1.82
VMA7YGR020C SGS1P35187 1447 aa3.7□□□□□ -1.82
VMA7YGR020C CYB2P00175 591 aa3.69□□□□□ -1.82
VMA7YGR020C MTF1P14908 341 aaKnown RBP3.69□□□□□ -1.82
VMA7YGR020C EST1P17214 699 aaPredicted RBP3.69□□□□□ -1.82
VMA7YGR020C AAC3P18238 307 aa3.69□□□□□ -1.82
VMA7YGR020C PTR2P32901 601 aa3.69□□□□□ -1.82
VMA7YGR020C SEF1P34228 1148 aa3.69□□□□□ -1.82
VMA7YGR020C YHR210CP38893 341 aa3.69□□□□□ -1.82
VMA7YGR020C KRE9P39005 276 aa3.69□□□□□ -1.82
VMA7YGR020C VPS52P39904 641 aa3.69□□□□□ -1.82
VMA7YGR020C RTT101P47050 842 aa3.69□□□□□ -1.82
VMA7YGR020C VID30P53076 958 aa3.69□□□□□ -1.82
VMA7YGR020C IPI3P53877 555 aa3.69□□□□□ -1.82
VMA7YGR020C IMP4P53941 290 aaKnown RBP3.69□□□□□ -1.82
VMA7YGR020C SET6Q12529 373 aa3.69□□□□□ -1.82
VMA7YGR020C PRP16P15938 1071 aaPredicted RBP3.68□□□□□ -1.82
VMA7YGR020C SAN1P22470 610 aa3.68□□□□□ -1.82
VMA7YGR020C BUD14P27637 709 aa3.68□□□□□ -1.82
VMA7YGR020C ATS1P31386 333 aa3.68□□□□□ -1.82
VMA7YGR020C LOS1P33418 1100 aaPredicted RBP3.68□□□□□ -1.82
VMA7YGR020C NOP4P37838 685 aaKnown RBP3.68□□□□□ -1.82
VMA7YGR020C ALG5P40350 334 aa3.68□□□□□ -1.82
VMA7YGR020C YJR154WP47181 346 aa3.68□□□□□ -1.82
VMA7YGR020C GIS2P53849 153 aaKnown RBP RIP-Chip data3.68□□□□□ -1.82not detected
VMA7YGR020C SVL3Q03088 825 aaKnown RBP3.68□□□□□ -1.82
VMA7YGR020C YOR365CQ08844 703 aa3.68□□□□□ -1.82
VMA7YGR020C CAR1P00812 333 aaKnown RBP3.67□□□□□ -1.82
VMA7YGR020C GDH1P07262 454 aaKnown RBP3.67□□□□□ -1.82
VMA7YGR020C PEP4P07267 405 aaKnown RBP3.67□□□□□ -1.82
VMA7YGR020C SPC110P32380 944 aa3.67□□□□□ -1.82
VMA7YGR020C RPH1P39956 796 aa3.67□□□□□ -1.82
VMA7YGR020C TMA108P40462 946 aa3.67□□□□□ -1.82
VMA7YGR020C RPR2P40571 144 aa3.67□□□□□ -1.82
VMA7YGR020C YFR016CP43597 1233 aaKnown RBP3.67□□□□□ -1.82
VMA7YGR020C ROK1P45818 564 aaPredicted RBP3.67□□□□□ -1.82
VMA7YGR020C UPF3P48412 387 aaKnown RBP3.67□□□□□ -1.82
VMA7YGR020C DRN1P53255 507 aaKnown RBP3.67□□□□□ -1.82
VMA7YGR020C RLI1Q03195 608 aaKnown RBP3.67□□□□□ -1.82
VMA7YGR020C ERP1Q05359 219 aaKnown RBP3.67□□□□□ -1.82
VMA7YGR020C SYO1Q07395 620 aa3.67□□□□□ -1.82
VMA7YGR020C RCN2Q12044 265 aa3.67□□□□□ -1.82
VMA7YGR020C HSH49Q99181 213 aaPredicted RBP3.67□□□□□ -1.82
VMA7YGR020C RAD52P06778 471 aaKnown RBP3.66□□□□□ -1.82
VMA7YGR020C AMD1P15274 810 aaKnown RBP3.66□□□□□ -1.82
VMA7YGR020C GFD2P25370 566 aaKnown RBP3.66□□□□□ -1.82
VMA7YGR020C SHP1P34223 423 aa3.66□□□□□ -1.82
VMA7YGR020C MTC4P38335 694 aaKnown RBP3.66□□□□□ -1.82
VMA7YGR020C YJL213WP40896 331 aa3.66□□□□□ -1.82
VMA7YGR020C ALK1P43633 760 aaKnown RBP3.66□□□□□ -1.82
VMA7YGR020C SCD6P45978 349 aaKnown RBP RIP-Chip data3.66□□□□□ -1.82not detected
VMA7YGR020C YDL186WP48568 277 aa3.66□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 35.2 ms