RNA–Protein interactions for RNA: YFL004W

VTC2, Transcript of Subunit of vacuolar transporter chaperone (VTC) complex, yeast

Gene VTC2, Length 2,487 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VTC2	YFL004W	BI4	P03879	638 aa		5.37	□□□□□ -1.55
VTC2	YFL004W	ACE2	P21192	770 aa		5.37	□□□□□ -1.55
VTC2	YFL004W	CBT1	P36038	271 aa	Predicted RBP	5.37	□□□□□ -1.55
VTC2	YFL004W	GIC1	P38785	314 aa		5.37	□□□□□ -1.55
VTC2	YFL004W	SBE22	P38814	852 aa		5.37	□□□□□ -1.55
VTC2	YFL004W	GIP4	P39732	760 aa		5.37	□□□□□ -1.55
VTC2	YFL004W	MGS1	P40151	587 aa		5.37	□□□□□ -1.55
VTC2	YFL004W	RPS12	P48589	143 aa	Known RBP	5.37	□□□□□ -1.55
VTC2	YFL004W	UBC12	P52491	188 aa		5.37	□□□□□ -1.55
VTC2	YFL004W	DAM1	P53267	343 aa		5.37	□□□□□ -1.55
VTC2	YFL004W	SLI1	P53304	468 aa		5.37	□□□□□ -1.55
VTC2	YFL004W	SPP1	Q03012	353 aa		5.37	□□□□□ -1.55
VTC2	YFL004W	YDR541C	Q03049	344 aa		5.37	□□□□□ -1.55
VTC2	YFL004W	TAF11	Q04226	346 aa		5.37	□□□□□ -1.55
VTC2	YFL004W	YOL159C	Q08300	171 aa		5.37	□□□□□ -1.55
VTC2	YFL004W	BI3	Q9ZZW7	517 aa		5.37	□□□□□ -1.55
VTC2	YFL004W	FIG2	P25653	1609 aa		5.37	□□□□□ -1.55
VTC2	YFL004W	MOT1	P32333	1867 aa		5.36	□□□□□ -1.55
VTC2	YFL004W	KAR1	P11927	433 aa		5.36	□□□□□ -1.55
VTC2	YFL004W	HAP4	P14064	554 aa		5.36	□□□□□ -1.55
VTC2	YFL004W	SLY1	P22213	666 aa		5.36	□□□□□ -1.55
VTC2	YFL004W	AMS1	P22855	1083 aa		5.36	□□□□□ -1.55
VTC2	YFL004W	BUD31	P25337	157 aa	Predicted RBP	5.36	□□□□□ -1.55
VTC2	YFL004W	BCS1	P32839	456 aa		5.36	□□□□□ -1.55
VTC2	YFL004W	MDL2	P33311	773 aa		5.36	□□□□□ -1.55
VTC2	YFL004W	PXA2	P34230	853 aa		5.36	□□□□□ -1.55
VTC2	YFL004W	ATG12	P38316	186 aa		5.36	□□□□□ -1.55
VTC2	YFL004W	FLC2	P39719	783 aa		5.36	□□□□□ -1.55
VTC2	YFL004W	TPA1	P40032	644 aa	Known RBP	5.36	□□□□□ -1.55
VTC2	YFL004W	KHA1	P40309	873 aa		5.36	□□□□□ -1.55
VTC2	YFL004W	BUD13	P46947	266 aa	Predicted RBP	5.36	□□□□□ -1.55
VTC2	YFL004W	VTC4	P47075	721 aa		5.36	□□□□□ -1.55
VTC2	YFL004W	GTF1	P53260	183 aa	Predicted RBP	5.36	□□□□□ -1.55
VTC2	YFL004W	GPD1	Q00055	391 aa	Known RBP	5.36	□□□□□ -1.55
VTC2	YFL004W	ENT5	Q03769	411 aa	Known RBP	5.36	□□□□□ -1.55
VTC2	YFL004W	TRM82	Q03774	444 aa		5.36	□□□□□ -1.55
VTC2	YFL004W	CRR1	Q05790	422 aa		5.36	□□□□□ -1.55
VTC2	YFL004W	THI7	Q05998	598 aa		5.36	□□□□□ -1.55
VTC2	YFL004W	NEJ1	Q06148	342 aa		5.36	□□□□□ -1.55
VTC2	YFL004W	GRS2	Q06817	618 aa		5.36	□□□□□ -1.55
VTC2	YFL004W	YEH1	Q07804	573 aa		5.36	□□□□□ -1.55
VTC2	YFL004W	UBR1	P19812	1950 aa		5.36	□□□□□ -1.55
VTC2	YFL004W	GPH1	P06738	902 aa	Known RBP	5.36	□□□□□ -1.55
VTC2	YFL004W	SEC53	P07283	254 aa	Known RBP	5.36	□□□□□ -1.55
VTC2	YFL004W	STE12	P13574	688 aa		5.36	□□□□□ -1.55
VTC2	YFL004W	PRI2	P20457	528 aa		5.36	□□□□□ -1.55
VTC2	YFL004W	PPZ1	P26570	692 aa		5.36	□□□□□ -1.55
VTC2	YFL004W	UTR4	P32626	227 aa		5.36	□□□□□ -1.55
VTC2	YFL004W	JEN1	P36035	616 aa		5.36	□□□□□ -1.55
VTC2	YFL004W	MRPL3	P36516	390 aa		5.36	□□□□□ -1.55
VTC2	YFL004W	YBR056W	P38081	501 aa		5.36	□□□□□ -1.55
VTC2	YFL004W	TOS1	P38288	455 aa		5.36	□□□□□ -1.55
VTC2	YFL004W	RRP4	P38792	359 aa	Known RBP	5.36	□□□□□ -1.55
VTC2	YFL004W	GTT1	P40582	234 aa		5.36	□□□□□ -1.55
VTC2	YFL004W	CPR7	P47103	393 aa		5.36	□□□□□ -1.55
VTC2	YFL004W	FOL1	P53848	824 aa		5.36	□□□□□ -1.55
VTC2	YFL004W	ROD1	Q02805	837 aa		5.36	□□□□□ -1.55
VTC2	YFL004W	TIF35	Q04067	274 aa	Known RBP	5.36	□□□□□ -1.55
VTC2	YFL004W	ECM38	Q05902	660 aa	Predicted RBP	5.36	□□□□□ -1.55
VTC2	YFL004W	TRE2	Q08693	809 aa		5.36	□□□□□ -1.55
VTC2	YFL004W	MSC6	Q08818	692 aa	Known RBP	5.36	□□□□□ -1.55
VTC2	YFL004W	DGK1	Q12382	290 aa		5.36	□□□□□ -1.55
VTC2	YFL004W	YOR131C	Q12486	218 aa		5.36	□□□□□ -1.55
VTC2	YFL004W	LAG2	Q92325	660 aa		5.36	□□□□□ -1.55
VTC2	YFL004W	CBP2	P03874	630 aa	Predicted RBP	5.35	□□□□□ -1.55
VTC2	YFL004W	FPS1	P23900	669 aa		5.35	□□□□□ -1.55
VTC2	YFL004W	LST4	P34239	828 aa		5.35	□□□□□ -1.55
VTC2	YFL004W	YKL100C	P34248	587 aa		5.35	□□□□□ -1.55
VTC2	YFL004W	CSG2	P35206	410 aa		5.35	□□□□□ -1.55
VTC2	YFL004W	CDS1	P38221	457 aa		5.35	□□□□□ -1.55
VTC2	YFL004W	NMD3	P38861	518 aa	Known RBP	5.35	□□□□□ -1.55
VTC2	YFL004W	AIM2	P39721	246 aa		5.35	□□□□□ -1.55
VTC2	YFL004W	CAF16	P43569	289 aa		5.35	□□□□□ -1.55
VTC2	YFL004W	PYK2	P52489	506 aa	Known RBP	5.35	□□□□□ -1.55
VTC2	YFL004W	MRH4	P53166	561 aa		5.35	□□□□□ -1.55
VTC2	YFL004W	TUB4	P53378	473 aa		5.35	□□□□□ -1.55
VTC2	YFL004W	SPC98	P53540	846 aa		5.35	□□□□□ -1.55
VTC2	YFL004W	YNL010W	P53981	241 aa	Known RBP	5.35	□□□□□ -1.55
VTC2	YFL004W	ACS1	Q01574	713 aa		5.35	□□□□□ -1.55
VTC2	YFL004W	YML131W	Q03102	365 aa		5.35	□□□□□ -1.55
VTC2	YFL004W	MFB1	Q04922	465 aa		5.35	□□□□□ -1.55
VTC2	YFL004W	YDR344C	Q05510	147 aa		5.35	□□□□□ -1.55
VTC2	YFL004W	YDL124W	Q07551	312 aa	Known RBP	5.35	□□□□□ -1.55
VTC2	YFL004W	BRX1	Q08235	291 aa	Known RBP	5.35	□□□□□ -1.55
VTC2	YFL004W	YOR012W	Q12351	137 aa		5.35	□□□□□ -1.55
VTC2	YFL004W	YOL159C-A	Q3E769	90 aa		5.35	□□□□□ -1.55
VTC2	YFL004W	RAD7	P06779	565 aa		5.35	□□□□□ -1.55
VTC2	YFL004W	GCY1	P14065	312 aa	Known RBP RIP-Chip data	5.35	□□□□□ -1.55	not detected
VTC2	YFL004W	RPL3	P14126	387 aa	Known RBP	5.35	□□□□□ -1.55
VTC2	YFL004W	CCA1	P21269	546 aa		5.35	□□□□□ -1.55
VTC2	YFL004W	RNR1	P21524	888 aa	Known RBP	5.35	□□□□□ -1.55
VTC2	YFL004W	GCD11	P32481	527 aa	Known RBP	5.35	□□□□□ -1.55
VTC2	YFL004W	ZRT3	P34240	503 aa		5.35	□□□□□ -1.55
VTC2	YFL004W	ATG19	P35193	415 aa		5.35	□□□□□ -1.55
VTC2	YFL004W	SEN34	P39707	275 aa		5.35	□□□□□ -1.55
VTC2	YFL004W	SSO2	P39926	295 aa		5.35	□□□□□ -1.55
VTC2	YFL004W	YER184C	P39961	794 aa		5.35	□□□□□ -1.55
VTC2	YFL004W	EDC3	P39998	551 aa	Known RBP	5.35	□□□□□ -1.55
VTC2	YFL004W	SPR6	Q01684	191 aa		5.35	□□□□□ -1.55
VTC2	YFL004W	TRM12	Q04235	462 aa		5.35	□□□□□ -1.55

Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms