RNA–Protein interactions for RNA: YER116C

SLX8, Transcript of Subunit of Slx5-Slx8 SUMO-targeted ubiquitin ligase (STUbL) complex, yeast

Gene SLX8, Length 825 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SLX8	YER116C	BOP3	P53958	396 aa		4.05	□□□□□ -1.76
SLX8	YER116C	PET117	Q02771	107 aa		4.05	□□□□□ -1.76
SLX8	YER116C	MRPS17	Q03246	237 aa	Predicted RBP	4.05	□□□□□ -1.76
SLX8	YER116C	RSM28	Q03430	361 aa		4.05	□□□□□ -1.76
SLX8	YER116C	PDS5	Q04264	1277 aa		4.05	□□□□□ -1.76
SLX8	YER116C	VAC14	Q06708	880 aa		4.05	□□□□□ -1.76
SLX8	YER116C	YLL007C	Q07799	665 aa		4.05	□□□□□ -1.76
SLX8	YER116C	SIL1	Q08199	421 aa		4.05	□□□□□ -1.76
SLX8	YER116C	FRE3	Q08905	711 aa		4.05	□□□□□ -1.76
SLX8	YER116C	YPL272C	Q08984	517 aa		4.05	□□□□□ -1.76
SLX8	YER116C	AIM41	Q12032	185 aa		4.05	□□□□□ -1.76
SLX8	YER116C	MED4	Q12343	284 aa		4.05	□□□□□ -1.76
SLX8	YER116C	RTC1	Q08281	1341 aa		4.04	□□□□□ -1.76
SLX8	YER116C	PDE2	P06776	526 aa		4.04	□□□□□ -1.76
SLX8	YER116C	ILV2	P07342	687 aa	Known RBP	4.04	□□□□□ -1.76
SLX8	YER116C	FBP1	P09201	348 aa		4.04	□□□□□ -1.76
SLX8	YER116C	SRV2	P17555	526 aa	Known RBP	4.04	□□□□□ -1.76
SLX8	YER116C	SPO7	P18410	259 aa		4.04	□□□□□ -1.76
SLX8	YER116C	PET18	P25362	215 aa		4.04	□□□□□ -1.76
SLX8	YER116C	URK1	P27515	501 aa		4.04	□□□□□ -1.76
SLX8	YER116C	CDC15	P27636	974 aa		4.04	□□□□□ -1.76
SLX8	YER116C	IDH2	P28241	369 aa	Known RBP	4.04	□□□□□ -1.76
SLX8	YER116C	BEM1	P29366	551 aa		4.04	□□□□□ -1.76
SLX8	YER116C	ITR1	P30605	584 aa		4.04	□□□□□ -1.76
SLX8	YER116C	SSE2	P32590	693 aa	Known RBP	4.04	□□□□□ -1.76
SLX8	YER116C	PRS1	P32895	427 aa	Known RBP	4.04	□□□□□ -1.76
SLX8	YER116C	SEC66	P33754	206 aa		4.04	□□□□□ -1.76
SLX8	YER116C	YHR045W	P38775	560 aa		4.04	□□□□□ -1.76
SLX8	YER116C	END3	P39013	349 aa		4.04	□□□□□ -1.76
SLX8	YER116C	SCC4	P40090	624 aa		4.04	□□□□□ -1.76
SLX8	YER116C	PFA3	P42836	336 aa		4.04	□□□□□ -1.76
SLX8	YER116C	IDS2	P46958	469 aa		4.04	□□□□□ -1.76
SLX8	YER116C	NMD5	P46970	1048 aa		4.04	□□□□□ -1.76
SLX8	YER116C	YHC3	P47040	408 aa		4.04	□□□□□ -1.76
SLX8	YER116C	MRK1	P50873	501 aa		4.04	□□□□□ -1.76
SLX8	YER116C	YGL185C	P53100	379 aa		4.04	□□□□□ -1.76
SLX8	YER116C	STR3	P53101	465 aa	Known RBP	4.04	□□□□□ -1.76
SLX8	YER116C	YGL114W	P53134	725 aa		4.04	□□□□□ -1.76
SLX8	YER116C	MPS2	P53159	387 aa		4.04	□□□□□ -1.76
SLX8	YER116C	RRB1	Q04225	511 aa	Known RBP	4.04	□□□□□ -1.76
SLX8	YER116C	SMA2	Q04658	369 aa		4.04	□□□□□ -1.76
SLX8	YER116C	HOF1	Q05080	669 aa		4.04	□□□□□ -1.76
SLX8	YER116C	FMP40	Q08968	688 aa	Predicted RBP	4.04	□□□□□ -1.76
SLX8	YER116C	NDJ1	Q12366	352 aa		4.04	□□□□□ -1.76
SLX8	YER116C	ECM3	Q99252	613 aa		4.04	□□□□□ -1.76
SLX8	YER116C	SSA3	P09435	649 aa	Known RBP	4.03	□□□□□ -1.76
SLX8	YER116C	UGA1	P17649	471 aa		4.03	□□□□□ -1.76
SLX8	YER116C	CLN1	P20437	546 aa		4.03	□□□□□ -1.76
SLX8	YER116C	OSM1	P21375	501 aa	Known RBP	4.03	□□□□□ -1.76
SLX8	YER116C	VMA16	P23968	213 aa		4.03	□□□□□ -1.76
SLX8	YER116C	PEX1	P24004	1043 aa		4.03	□□□□□ -1.76
SLX8	YER116C	ADY2	P25613	283 aa		4.03	□□□□□ -1.76
SLX8	YER116C	YCR061W	P25639	631 aa		4.03	□□□□□ -1.76
SLX8	YER116C	MEI5	P32489	222 aa		4.03	□□□□□ -1.76
SLX8	YER116C	SRB5	P32585	307 aa		4.03	□□□□□ -1.76
SLX8	YER116C	PTK1	P36002	662 aa	Predicted RBP	4.03	□□□□□ -1.76
SLX8	YER116C	YKL023W	P36103	277 aa	Known RBP	4.03	□□□□□ -1.76
SLX8	YER116C	YKR015C	P36111	568 aa		4.03	□□□□□ -1.76
SLX8	YER116C	MNN2	P38069	597 aa		4.03	□□□□□ -1.76
SLX8	YER116C	STN1	P38960	494 aa		4.03	□□□□□ -1.76
SLX8	YER116C	SHQ1	P40486	507 aa	Predicted RBP	4.03	□□□□□ -1.76
SLX8	YER116C	SDS3	P40505	327 aa		4.03	□□□□□ -1.76
SLX8	YER116C	YRB2	P40517	327 aa		4.03	□□□□□ -1.76
SLX8	YER116C	RPS7B	P48164	190 aa	Known RBP	4.03	□□□□□ -1.76
SLX8	YER116C	GTO1	P48239	356 aa		4.03	□□□□□ -1.76
SLX8	YER116C	YIP5	P53108	310 aa		4.03	□□□□□ -1.76
SLX8	YER116C	TIM21	P53220	239 aa		4.03	□□□□□ -1.76
SLX8	YER116C	YGR126W	P53274	230 aa		4.03	□□□□□ -1.76
SLX8	YER116C	RTC4	P53850	401 aa		4.03	□□□□□ -1.76
SLX8	YER116C	KTR6	P54070	446 aa		4.03	□□□□□ -1.76
SLX8	YER116C	ARG5,6	Q01217	863 aa		4.03	□□□□□ -1.76
SLX8	YER116C	SKO1	Q02100	647 aa		4.03	□□□□□ -1.76
SLX8	YER116C	REC102	Q02721	264 aa		4.03	□□□□□ -1.76
SLX8	YER116C	MUS81	Q04149	632 aa	Predicted RBP	4.03	□□□□□ -1.76
SLX8	YER116C	YMR130W	Q04223	302 aa		4.03	□□□□□ -1.76
SLX8	YER116C	GTO3	Q04806	366 aa		4.03	□□□□□ -1.76
SLX8	YER116C	RRP45	Q05636	305 aa	Known RBP	4.03	□□□□□ -1.76
SLX8	YER116C	MRP13	P12686	339 aa		4.02	□□□□□ -1.77
SLX8	YER116C	SAG1	P20840	650 aa		4.02	□□□□□ -1.77
SLX8	YER116C	SEC15	P22224	910 aa		4.02	□□□□□ -1.77
SLX8	YER116C	KIN82	P25341	720 aa		4.02	□□□□□ -1.77
SLX8	YER116C	GID7	P25569	745 aa		4.02	□□□□□ -1.77
SLX8	YER116C	YCL068C	P25593	260 aa		4.02	□□□□□ -1.77
SLX8	YER116C	RDS1	P25611	832 aa		4.02	□□□□□ -1.77
SLX8	YER116C	TIF3	P34167	436 aa	Known RBP	4.02	□□□□□ -1.77
SLX8	YER116C	APT2	P36973	181 aa		4.02	□□□□□ -1.77
SLX8	YER116C	YBR139W	P38109	508 aa		4.02	□□□□□ -1.77
SLX8	YER116C	ZTA1	P38230	334 aa	Known RBP	4.02	□□□□□ -1.77
SLX8	YER116C	MSR1	P38714	643 aa		4.02	□□□□□ -1.77
SLX8	YER116C	YHR182W	P38870	785 aa		4.02	□□□□□ -1.77
SLX8	YER116C	CTF8	P38877	133 aa		4.02	□□□□□ -1.77
SLX8	YER116C	MND2	P40577	368 aa		4.02	□□□□□ -1.77
SLX8	YER116C	NET1	P47035	1189 aa		4.02	□□□□□ -1.77
SLX8	YER116C	COS12	P53053	380 aa		4.02	□□□□□ -1.77
SLX8	YER116C	RTT102	P53330	157 aa		4.02	□□□□□ -1.77
SLX8	YER116C	RET3	P53600	189 aa		4.02	□□□□□ -1.77
SLX8	YER116C	COP1	P53622	1201 aa	Known RBP	4.02	□□□□□ -1.77
SLX8	YER116C	SPO19	Q03029	223 aa		4.02	□□□□□ -1.77
SLX8	YER116C	RSN1	Q03516	953 aa		4.02	□□□□□ -1.77
SLX8	YER116C	RRN11	Q04712	507 aa		4.02	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 68.3 ms