RNA–Protein interactions for RNA: YER002W

NOP16, Transcript of Constituent of 66S pre-ribosomal particles, yeast

Gene NOP16, Length 696 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NOP16	YER002W	STR3	P53101	465 aa	Known RBP	4.87	□□□□□ -1.63
NOP16	YER002W	FLC3	P53121	802 aa		4.87	□□□□□ -1.63
NOP16	YER002W	YGR012W	P53206	393 aa		4.87	□□□□□ -1.63
NOP16	YER002W	TIM13	P53299	105 aa		4.87	□□□□□ -1.63
NOP16	YER002W	GND2	P53319	492 aa		4.87	□□□□□ -1.63
NOP16	YER002W	IPI3	P53877	555 aa		4.87	□□□□□ -1.63
NOP16	YER002W	TEP1	P53916	434 aa		4.87	□□□□□ -1.63
NOP16	YER002W	KTR5	P53966	522 aa	Predicted RBP	4.87	□□□□□ -1.63
NOP16	YER002W	LRS4	Q04087	347 aa	Known RBP	4.87	□□□□□ -1.63
NOP16	YER002W	ADE13	Q05911	482 aa	Known RBP	4.87	□□□□□ -1.63
NOP16	YER002W	CMS1	Q07897	291 aa	Known RBP	4.87	□□□□□ -1.63
NOP16	YER002W	NSE1	Q07913	336 aa		4.87	□□□□□ -1.63
NOP16	YER002W	IRC10	Q08118	586 aa		4.87	□□□□□ -1.63
NOP16	YER002W	YLR046C	Q12253	270 aa		4.87	□□□□□ -1.63
NOP16	YER002W	PNS1	Q12412	539 aa		4.87	□□□□□ -1.63
NOP16	YER002W	YKL068W-A	Q3E826	78 aa		4.87	□□□□□ -1.63
NOP16	YER002W	CCH1	P50077	2039 aa		4.86	□□□□□ -1.63
NOP16	YER002W	CET1	O13297	549 aa	Predicted RBP	4.86	□□□□□ -1.63
NOP16	YER002W	TEF1	P02994	458 aa	Known RBP	4.86	□□□□□ -1.63
NOP16	YER002W	ARG4	P04076	463 aa	Predicted RBP	4.86	□□□□□ -1.63
NOP16	YER002W	RPP2A	P05319	106 aa	Known RBP	4.86	□□□□□ -1.63
NOP16	YER002W	RPB2	P08518	1224 aa	Known RBP	4.86	□□□□□ -1.63
NOP16	YER002W	GPA2	P10823	449 aa		4.86	□□□□□ -1.63
NOP16	YER002W	SCH9	P11792	824 aa	Known RBP	4.86	□□□□□ -1.63
NOP16	YER002W	HMG1	P12683	1054 aa		4.86	□□□□□ -1.63
NOP16	YER002W	FPR1	P20081	114 aa	Known RBP	4.86	□□□□□ -1.63
NOP16	YER002W	YCL002C	P25565	263 aa		4.86	□□□□□ -1.63
NOP16	YER002W	YCL068C	P25593	260 aa		4.86	□□□□□ -1.63
NOP16	YER002W	GEX1	P25596	615 aa		4.86	□□□□□ -1.63
NOP16	YER002W	ILV6	P25605	309 aa	Known RBP	4.86	□□□□□ -1.63
NOP16	YER002W	ECM32	P32644	1121 aa	Known RBP	4.86	□□□□□ -1.63
NOP16	YER002W	GEX2	P36173	615 aa		4.86	□□□□□ -1.63
NOP16	YER002W	OAF1	P39720	1047 aa	Predicted RBP	4.86	□□□□□ -1.63
NOP16	YER002W	SAP1	P39955	897 aa	Known RBP	4.86	□□□□□ -1.63
NOP16	YER002W	OSW5	P40219	148 aa		4.86	□□□□□ -1.63
NOP16	YER002W	RMD8	P43620	662 aa		4.86	□□□□□ -1.63
NOP16	YER002W	BUD13	P46947	266 aa	Predicted RBP	4.86	□□□□□ -1.63
NOP16	YER002W	VEL1	P53058	206 aa		4.86	□□□□□ -1.63
NOP16	YER002W	NOP15	P53927	220 aa	Predicted RBP	4.86	□□□□□ -1.63
NOP16	YER002W	EFM6	P53970	246 aa		4.86	□□□□□ -1.63
NOP16	YER002W	REG1	Q00816	1014 aa		4.86	□□□□□ -1.63
NOP16	YER002W	PIR1	Q03178	341 aa		4.86	□□□□□ -1.63
NOP16	YER002W	USA1	Q03714	838 aa		4.86	□□□□□ -1.63
NOP16	YER002W	RUD3	Q12234	484 aa	Known RBP	4.86	□□□□□ -1.63
NOP16	YER002W	YBR182C-A	Q8TGU6	64 aa		4.86	□□□□□ -1.63
NOP16	YER002W	ILV2	P07342	687 aa	Known RBP	4.85	□□□□□ -1.63
NOP16	YER002W	CLN1	P20437	546 aa		4.85	□□□□□ -1.63
NOP16	YER002W	MNE1	P24720	663 aa		4.85	□□□□□ -1.63
NOP16	YER002W	YSP3	P25036	478 aa		4.85	□□□□□ -1.63
NOP16	YER002W	RBK1	P25332	333 aa		4.85	□□□□□ -1.63
NOP16	YER002W	DCC1	P25559	380 aa		4.85	□□□□□ -1.63
NOP16	YER002W	AEP1	P32493	518 aa		4.85	□□□□□ -1.63
NOP16	YER002W	PXA2	P34230	853 aa		4.85	□□□□□ -1.63
NOP16	YER002W	SPC97	P38863	823 aa		4.85	□□□□□ -1.63
NOP16	YER002W	REV7	P38927	245 aa		4.85	□□□□□ -1.63
NOP16	YER002W	PXA1	P41909	870 aa		4.85	□□□□□ -1.63
NOP16	YER002W	YFL012W	P43580	148 aa		4.85	□□□□□ -1.63
NOP16	YER002W	RET2	P43621	546 aa		4.85	□□□□□ -1.63
NOP16	YER002W	SIP4	P46954	829 aa		4.85	□□□□□ -1.63
NOP16	YER002W	YNR061C	P53747	219 aa		4.85	□□□□□ -1.63
NOP16	YER002W	PRM1	P53835	661 aa		4.85	□□□□□ -1.63
NOP16	YER002W	SUB1	P54000	292 aa	Known RBP	4.85	□□□□□ -1.63
NOP16	YER002W	SLT2	Q00772	484 aa		4.85	□□□□□ -1.63
NOP16	YER002W	NUP100	Q02629	959 aa		4.85	□□□□□ -1.63
NOP16	YER002W	TRS31	Q03337	283 aa		4.85	□□□□□ -1.63
NOP16	YER002W	PLB2	Q03674	706 aa		4.85	□□□□□ -1.63
NOP16	YER002W	SIZ1	Q04195	904 aa		4.85	□□□□□ -1.63
NOP16	YER002W	YPR114W	Q06107	315 aa		4.85	□□□□□ -1.63
NOP16	YER002W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.85	□□□□□ -1.63	not detected
NOP16	YER002W	ATP4	P05626	244 aa		4.84	□□□□□ -1.63
NOP16	YER002W	MSF1	P08425	469 aa		4.84	□□□□□ -1.63
NOP16	YER002W	KAR1	P11927	433 aa		4.84	□□□□□ -1.63
NOP16	YER002W	CMP2	P14747	604 aa		4.84	□□□□□ -1.63
NOP16	YER002W	PMA2	P19657	947 aa		4.84	□□□□□ -1.63
NOP16	YER002W	ATP12	P22135	325 aa		4.84	□□□□□ -1.63
NOP16	YER002W	EMC1	P25574	760 aa		4.84	□□□□□ -1.63
NOP16	YER002W	CCR4	P31384	837 aa	Known RBP	4.84	□□□□□ -1.63
NOP16	YER002W	CSE1	P33307	960 aa		4.84	□□□□□ -1.63
NOP16	YER002W	CTF13	P35203	478 aa		4.84	□□□□□ -1.63
NOP16	YER002W	OAF3	P36023	863 aa		4.84	□□□□□ -1.63
NOP16	YER002W	ALY1	P36117	915 aa		4.84	□□□□□ -1.63
NOP16	YER002W	ETR1	P38071	380 aa		4.84	□□□□□ -1.63
NOP16	YER002W	MAK5	P38112	773 aa	Predicted RBP	4.84	□□□□□ -1.63
NOP16	YER002W	MRP21	P38175	177 aa		4.84	□□□□□ -1.63
NOP16	YER002W	RGI2	P40188	164 aa		4.84	□□□□□ -1.63
NOP16	YER002W	PAN6	P40459	309 aa		4.84	□□□□□ -1.63
NOP16	YER002W	HXT16	P47185	567 aa		4.84	□□□□□ -1.63
NOP16	YER002W	UBC9	P50623	157 aa	Predicted RBP	4.84	□□□□□ -1.63
NOP16	YER002W	SAP4	P53036	818 aa		4.84	□□□□□ -1.63
NOP16	YER002W	PBP1	P53297	722 aa	Known RBP	4.84	□□□□□ -1.63
NOP16	YER002W	YDR109C	Q04585	715 aa		4.84	□□□□□ -1.63
NOP16	YER002W	SFH1	Q06168	426 aa		4.84	□□□□□ -1.63
NOP16	YER002W	YET3	Q07451	203 aa		4.84	□□□□□ -1.63
NOP16	YER002W	ADY3	Q07732	790 aa		4.84	□□□□□ -1.63
NOP16	YER002W	VHS3	Q08438	674 aa		4.84	□□□□□ -1.63
NOP16	YER002W	SLD7	Q08457	257 aa		4.84	□□□□□ -1.63
NOP16	YER002W	PER33	Q12144	273 aa		4.84	□□□□□ -1.63
NOP16	YER002W	RIM1	P32445	135 aa	Known RBP	4.83	□□□□□ -1.64
NOP16	YER002W	RPD3	P32561	433 aa		4.83	□□□□□ -1.64
NOP16	YER002W	IMP3	P32899	183 aa	Predicted RBP	4.83	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms