RNA–Protein interactions for RNA: YDR498C

SEC20, Transcript of Membrane glycoprotein v-SNARE, yeastyeast

Gene SEC20, Length 1,152 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC20YDR498C DYN3Q04949 312 aa5.65□□□□□ -1.5
SEC20YDR498C YPR114WQ06107 315 aa5.65□□□□□ -1.5
SEC20YDR498C JIP5Q06214 492 aaPredicted RBP5.65□□□□□ -1.5
SEC20YDR498C HUA2Q12134 243 aa5.65□□□□□ -1.5
SEC20YDR498C HXK2P04807 486 aaKnown RBP5.64□□□□□ -1.51
SEC20YDR498C CDC21P06785 304 aa5.64□□□□□ -1.51
SEC20YDR498C FUM1P08417 488 aaKnown RBP5.64□□□□□ -1.51
SEC20YDR498C COS2P0CX12 379 aa5.64□□□□□ -1.51
SEC20YDR498C COS3P0CX13 379 aa5.64□□□□□ -1.51
SEC20YDR498C NMT1P14743 455 aa5.64□□□□□ -1.51
SEC20YDR498C UGA1P17649 471 aa5.64□□□□□ -1.51
SEC20YDR498C PMA2P19657 947 aa5.64□□□□□ -1.51
SEC20YDR498C CCA1P21269 546 aa5.64□□□□□ -1.51
SEC20YDR498C PHO91P27514 894 aa5.64□□□□□ -1.51
SEC20YDR498C TFC1P32367 649 aa5.64□□□□□ -1.51
SEC20YDR498C FRE2P36033 711 aa5.64□□□□□ -1.51
SEC20YDR498C CAF4P36130 643 aa5.64□□□□□ -1.51
SEC20YDR498C PEX28P38848 579 aa5.64□□□□□ -1.51
SEC20YDR498C YEN1P40028 759 aa5.64□□□□□ -1.51
SEC20YDR498C SCS2P40075 244 aaKnown RBP5.64□□□□□ -1.51
SEC20YDR498C COS4P43542 379 aa5.64□□□□□ -1.51
SEC20YDR498C SIP4P46954 829 aa5.64□□□□□ -1.51
SEC20YDR498C GLG2P47011 380 aa5.64□□□□□ -1.51
SEC20YDR498C YPT32P51996 222 aaKnown RBP5.64□□□□□ -1.51
SEC20YDR498C MCM6P53091 1017 aaKnown RBP5.64□□□□□ -1.51
SEC20YDR498C YGR053CP53234 283 aa5.64□□□□□ -1.51
SEC20YDR498C ASI2P53895 289 aa5.64□□□□□ -1.51
SEC20YDR498C TOF2Q02208 771 aa5.64□□□□□ -1.51
SEC20YDR498C HMO1Q03973 246 aaKnown RBP5.64□□□□□ -1.51
SEC20YDR498C SSL1Q04673 461 aaPredicted RBP5.64□□□□□ -1.51
SEC20YDR498C ATG26Q06321 1198 aa5.64□□□□□ -1.51
SEC20YDR498C SMF3Q12078 473 aaPredicted RBP5.64□□□□□ -1.51
SEC20YDR498C WTM2Q12206 467 aa5.64□□□□□ -1.51
SEC20YDR498C AHC1Q12433 566 aa5.64□□□□□ -1.51
SEC20YDR498C ARG81P05085 880 aa5.63□□□□□ -1.51
SEC20YDR498C GCD2P12754 651 aaPredicted RBP5.63□□□□□ -1.51
SEC20YDR498C KIN3P22209 435 aa5.63□□□□□ -1.51
SEC20YDR498C MNE1P24720 663 aa5.63□□□□□ -1.51
SEC20YDR498C OCA4P25366 362 aa5.63□□□□□ -1.51
SEC20YDR498C CIN8P27895 1000 aa5.63□□□□□ -1.51
SEC20YDR498C BRF1P29056 596 aa5.63□□□□□ -1.51
SEC20YDR498C STE5P32917 917 aa5.63□□□□□ -1.51
SEC20YDR498C RPT5P33297 434 aaKnown RBP5.63□□□□□ -1.51
SEC20YDR498C RPS1AP33442 255 aaKnown RBP5.63□□□□□ -1.51
SEC20YDR498C PEX6P33760 1030 aa5.63□□□□□ -1.51
SEC20YDR498C EMC3P36039 253 aa5.63□□□□□ -1.51
SEC20YDR498C ROT2P38138 954 aa5.63□□□□□ -1.51
SEC20YDR498C HSE1P38753 452 aa5.63□□□□□ -1.51
SEC20YDR498C DHH1P39517 506 aaKnown RBP5.63□□□□□ -1.51
SEC20YDR498C DOT6P40059 670 aaKnown RBP5.63□□□□□ -1.51
SEC20YDR498C RLP7P40693 322 aaKnown RBP5.63□□□□□ -1.51
SEC20YDR498C DIM1P41819 318 aaKnown RBP5.63□□□□□ -1.51
SEC20YDR498C IME4P41833 600 aa5.63□□□□□ -1.51
SEC20YDR498C YRB1P41920 201 aaKnown RBP5.63□□□□□ -1.51
SEC20YDR498C NAS6P50086 228 aa5.63□□□□□ -1.51
SEC20YDR498C EFM5P53200 248 aaKnown RBP5.63□□□□□ -1.51
SEC20YDR498C YGR016WP53209 190 aa5.63□□□□□ -1.51
SEC20YDR498C SHY1P53266 389 aa5.63□□□□□ -1.51
SEC20YDR498C RPC11Q04307 110 aaPredicted RBP5.63□□□□□ -1.51
SEC20YDR498C HSP31Q04432 237 aa5.63□□□□□ -1.51
SEC20YDR498C RAD34Q06665 692 aa5.63□□□□□ -1.51
SEC20YDR498C YOR338WQ99326 363 aa5.63□□□□□ -1.51
SEC20YDR498C YPR117WQ06116 2489 aa5.63□□□□□ -1.51
SEC20YDR498C CYR1P08678 2026 aaKnown RBP5.62□□□□□ -1.51
SEC20YDR498C HEM2P05373 342 aa5.62□□□□□ -1.51
SEC20YDR498C DST1P07273 309 aa5.62□□□□□ -1.51
SEC20YDR498C YAR066WP0CX18 203 aa5.62□□□□□ -1.51
SEC20YDR498C YHR214WP0CX19 203 aa5.62□□□□□ -1.51
SEC20YDR498C SBP1P10080 294 aaKnown RBP5.62□□□□□ -1.51
SEC20YDR498C IDI1P15496 288 aa5.62□□□□□ -1.51
SEC20YDR498C RPB4P20433 221 aaPredicted RBP5.62□□□□□ -1.51
SEC20YDR498C BUD14P27637 709 aa5.62□□□□□ -1.51
SEC20YDR498C FUN30P31380 1131 aa5.62□□□□□ -1.51
SEC20YDR498C TYE7P33122 291 aaPredicted RBP5.62□□□□□ -1.51
SEC20YDR498C SDH3P33421 198 aa5.62□□□□□ -1.51
SEC20YDR498C TIP20P33891 701 aa5.62□□□□□ -1.51
SEC20YDR498C MAK5P38112 773 aaPredicted RBP5.62□□□□□ -1.51
SEC20YDR498C IST2P38250 946 aa5.62□□□□□ -1.51
SEC20YDR498C YBR259WP38338 688 aa5.62□□□□□ -1.51
SEC20YDR498C YHR020WP38708 688 aaKnown RBP5.62□□□□□ -1.51
SEC20YDR498C PCL5P38794 229 aa5.62□□□□□ -1.51
SEC20YDR498C NPT1P39683 429 aaKnown RBP5.62□□□□□ -1.51
SEC20YDR498C GCD10P41814 478 aa5.62□□□□□ -1.51
SEC20YDR498C CCT7P42943 550 aaKnown RBP5.62□□□□□ -1.51
SEC20YDR498C YGL176CP46945 554 aa5.62□□□□□ -1.51
SEC20YDR498C YJR098CP47139 656 aa5.62□□□□□ -1.51
SEC20YDR498C YJR124CP47159 448 aa5.62□□□□□ -1.51
SEC20YDR498C MRK1P50873 501 aa5.62□□□□□ -1.51
SEC20YDR498C DIA3P52290 468 aa5.62□□□□□ -1.51
SEC20YDR498C GET1P53192 235 aa5.62□□□□□ -1.51
SEC20YDR498C YNL033WP53964 284 aa5.62□□□□□ -1.51
SEC20YDR498C YNL019CP53975 284 aa5.62□□□□□ -1.51
SEC20YDR498C MPS1P54199 764 aa5.62□□□□□ -1.51
SEC20YDR498C PRP38Q00723 242 aaPredicted RBP5.62□□□□□ -1.51
SEC20YDR498C ECM9Q02202 377 aa5.62□□□□□ -1.51
SEC20YDR498C LEE1Q02799 301 aaKnown RBP5.62□□□□□ -1.51
SEC20YDR498C YDR124WQ04608 324 aa5.62□□□□□ -1.51
SEC20YDR498C GSF2Q04697 403 aaKnown RBP5.62□□□□□ -1.51
SEC20YDR498C SPC2Q04969 178 aa5.62□□□□□ -1.51
SEC20YDR498C GGA1Q06336 557 aa5.62□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 19.7 ms