RNA–Protein interactions for RNA: YDR395W

SXM1, Transcript of Nuclear transport factor (karyopherin), yeastyeast

Gene SXM1, Length 2,835 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SXM1YDR395W TRM11Q12463 433 aa1.53□□□□□ -2.16
SXM1YDR395W TY1A-PR3Q6Q5H1 440 aaKnown RBP1.53□□□□□ -2.16
SXM1YDR395W TY1A-OLQ92392 440 aaKnown RBP1.53□□□□□ -2.16
SXM1YDR395W VPS13Q07878 3144 aa1.53□□□□□ -2.17
SXM1YDR395W CYC7P00045 113 aa1.53□□□□□ -2.17
SXM1YDR395W HXK2P04807 486 aaKnown RBP1.53□□□□□ -2.17
SXM1YDR395W YML002WP0CF17 737 aa1.53□□□□□ -2.17
SXM1YDR395W RAP1P11938 827 aa1.53□□□□□ -2.17
SXM1YDR395W GCD2P12754 651 aaPredicted RBP1.53□□□□□ -2.17
SXM1YDR395W MSB1P21339 1137 aaKnown RBP1.53□□□□□ -2.17
SXM1YDR395W YCK1P23291 538 aa1.53□□□□□ -2.17
SXM1YDR395W EMC1P25574 760 aa1.53□□□□□ -2.17
SXM1YDR395W BUD14P27637 709 aa1.53□□□□□ -2.17
SXM1YDR395W ERG1P32476 496 aaKnown RBP1.53□□□□□ -2.17
SXM1YDR395W BMH2P34730 273 aaKnown RBP1.53□□□□□ -2.17
SXM1YDR395W PHO11P35842 467 aa1.53□□□□□ -2.17
SXM1YDR395W ADD66P36040 267 aa1.53□□□□□ -2.17
SXM1YDR395W SDS22P36047 338 aa1.53□□□□□ -2.17
SXM1YDR395W YBR139WP38109 508 aa1.53□□□□□ -2.17
SXM1YDR395W THI2P38141 450 aa1.53□□□□□ -2.17
SXM1YDR395W TAE1P38340 232 aa1.53□□□□□ -2.17
SXM1YDR395W TSL1P38427 1098 aaKnown RBP1.53□□□□□ -2.17
SXM1YDR395W PHO12P38693 467 aa1.53□□□□□ -2.17
SXM1YDR395W MUP3P38734 546 aa1.53□□□□□ -2.17
SXM1YDR395W YHL017WP38745 532 aa1.53□□□□□ -2.17
SXM1YDR395W SMF2P38778 549 aa1.53□□□□□ -2.17
SXM1YDR395W AIM46P38885 310 aa1.53□□□□□ -2.17
SXM1YDR395W MNN9P39107 395 aaKnown RBP1.53□□□□□ -2.17
SXM1YDR395W YRB2P40517 327 aa1.53□□□□□ -2.17
SXM1YDR395W ULP2P40537 1034 aaPredicted RBP1.53□□□□□ -2.17
SXM1YDR395W SCD6P45978 349 aaKnown RBP RIP-Chip data1.53□□□□□ -2.17 RIP-Chip
SXM1YDR395W GLG2P47011 380 aa1.53□□□□□ -2.17
SXM1YDR395W SMC3P47037 1230 aa1.53□□□□□ -2.17
SXM1YDR395W URB2P47108 1174 aa1.53□□□□□ -2.17
SXM1YDR395W LIA1P47120 325 aaKnown RBP1.53□□□□□ -2.17
SXM1YDR395W ECM27P47144 725 aa1.53□□□□□ -2.17
SXM1YDR395W YDL183CP48569 320 aa1.53□□□□□ -2.17
SXM1YDR395W OGG1P53397 376 aaPredicted RBP1.53□□□□□ -2.17
SXM1YDR395W NOG2P53742 486 aaKnown RBP1.53□□□□□ -2.17
SXM1YDR395W NOP15P53927 220 aaPredicted RBP1.53□□□□□ -2.17
SXM1YDR395W SDH1Q00711 640 aa1.53□□□□□ -2.17
SXM1YDR395W RPM2Q02773 1202 aa1.53□□□□□ -2.17
SXM1YDR395W NGL2Q03264 515 aaKnown RBP1.53□□□□□ -2.17
SXM1YDR395W VPS60Q03390 229 aa1.53□□□□□ -2.17
SXM1YDR395W ROY1Q04847 553 aa1.53□□□□□ -2.17
SXM1YDR395W NNT1Q05874 261 aa1.53□□□□□ -2.17
SXM1YDR395W ARR2Q06597 130 aa1.53□□□□□ -2.17
SXM1YDR395W YDR306CQ06640 478 aa1.53□□□□□ -2.17
SXM1YDR395W BRX1Q08235 291 aaKnown RBP1.53□□□□□ -2.17
SXM1YDR395W RCN2Q12044 265 aa1.53□□□□□ -2.17
SXM1YDR395W YRM1Q12340 786 aa1.53□□□□□ -2.17
SXM1YDR395W SPE4Q12455 300 aa1.53□□□□□ -2.17
SXM1YDR395W SEC39Q12745 709 aa1.53□□□□□ -2.17
SXM1YDR395W SOD2P00447 233 aa1.52□□□□□ -2.17
SXM1YDR395W SEC53P07283 254 aaKnown RBP1.52□□□□□ -2.17
SXM1YDR395W CDC24P11433 854 aaPredicted RBP1.52□□□□□ -2.17
SXM1YDR395W UNG1P12887 359 aa1.52□□□□□ -2.17
SXM1YDR395W CBS1P14066 229 aa1.52□□□□□ -2.17
SXM1YDR395W CHS2P14180 963 aa1.52□□□□□ -2.17
SXM1YDR395W TAL1P15019 335 aaKnown RBP1.52□□□□□ -2.17
SXM1YDR395W MSS116P15424 664 aaKnown RBP1.52□□□□□ -2.17
SXM1YDR395W ERS1P17261 260 aa1.52□□□□□ -2.17
SXM1YDR395W FAR1P21268 830 aa1.52□□□□□ -2.17
SXM1YDR395W DAL81P21657 970 aa1.52□□□□□ -2.17
SXM1YDR395W GRR1P24814 1151 aa1.52□□□□□ -2.17
SXM1YDR395W PRD1P25375 712 aa1.52□□□□□ -2.17
SXM1YDR395W GEX1P25596 615 aa1.52□□□□□ -2.17
SXM1YDR395W SEC65P29478 273 aa1.52□□□□□ -2.17
SXM1YDR395W MTC7P32633 139 aa1.52□□□□□ -2.17
SXM1YDR395W RSM22P36056 628 aa1.52□□□□□ -2.17
SXM1YDR395W CUE2P36075 443 aaKnown RBP1.52□□□□□ -2.17
SXM1YDR395W GLG1P36143 616 aa1.52□□□□□ -2.17
SXM1YDR395W SRO77P38163 1010 aa1.52□□□□□ -2.17
SXM1YDR395W KAP104P38217 918 aaKnown RBP1.52□□□□□ -2.17
SXM1YDR395W RPN10P38886 268 aaKnown RBP1.52□□□□□ -2.17
SXM1YDR395W AKR1P39010 764 aa1.52□□□□□ -2.17
SXM1YDR395W YHB1P39676 399 aaKnown RBP1.52□□□□□ -2.17
SXM1YDR395W SSO2P39926 295 aa1.52□□□□□ -2.17
SXM1YDR395W SLZ1P40167 298 aa1.52□□□□□ -2.17
SXM1YDR395W LRO1P40345 661 aa1.52□□□□□ -2.17
SXM1YDR395W LOH1P47055 219 aa1.52□□□□□ -2.17
SXM1YDR395W BNA2P47125 453 aa1.52□□□□□ -2.17
SXM1YDR395W PEF1P53238 335 aa1.52□□□□□ -2.17
SXM1YDR395W SOK2P53438 785 aaPredicted RBP1.52□□□□□ -2.17
SXM1YDR395W DCP2P53550 970 aaKnown RBP1.52□□□□□ -2.17
SXM1YDR395W INN1P53901 409 aa1.52□□□□□ -2.17
SXM1YDR395W YNL143CP53908 130 aa1.52□□□□□ -2.17
SXM1YDR395W PEX13P80667 386 aa1.52□□□□□ -2.17
SXM1YDR395W YMR102CQ03177 834 aa1.52□□□□□ -2.17
SXM1YDR395W ABZ2Q03266 374 aa1.52□□□□□ -2.17
SXM1YDR395W YHM2Q04013 314 aa1.52□□□□□ -2.17
SXM1YDR395W EST2Q06163 884 aa1.52□□□□□ -2.17
SXM1YDR395W BCP1Q06338 283 aa1.52□□□□□ -2.17
SXM1YDR395W VAM6Q07468 1049 aa1.52□□□□□ -2.17
SXM1YDR395W AAD4Q07747 329 aa1.52□□□□□ -2.17
SXM1YDR395W GPB1Q08886 897 aa1.52□□□□□ -2.17
SXM1YDR395W TCO89Q08921 799 aa1.52□□□□□ -2.17
SXM1YDR395W YPL277CQ08989 487 aa1.52□□□□□ -2.17
SXM1YDR395W YLL058WQ12198 575 aa1.52□□□□□ -2.17
SXM1YDR395W LSP1Q12230 341 aaKnown RBP1.52□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 17.4 ms