RNA–Protein interactions for RNA: YDR334W

SWR1, Transcript of Swi2/Snf2-related ATPase, yeastyeast

Gene SWR1, Length 4,545 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWR1YDR334W RRN5Q02983 363 aa2.46□□□□□ -2.02
SWR1YDR334W CTL1Q03220 320 aaKnown RBP2.46□□□□□ -2.02
SWR1YDR334W TDA9Q04545 1251 aa2.46□□□□□ -2.02
SWR1YDR334W ECM38Q05902 660 aaPredicted RBP2.46□□□□□ -2.02
SWR1YDR334W YPR196WQ06595 470 aa2.46□□□□□ -2.02
SWR1YDR334W LOT6Q07923 191 aa2.46□□□□□ -2.02
SWR1YDR334W RRP40Q08285 240 aaKnown RBP2.46□□□□□ -2.02
SWR1YDR334W FRE5Q08908 694 aa2.46□□□□□ -2.02
SWR1YDR334W MRN1Q08925 612 aaKnown RBP RIP-Chip data2.46□□□□□ -2.02not detected
SWR1YDR334W PSF3Q12146 194 aa2.46□□□□□ -2.02
SWR1YDR334W RPS9AO13516 197 aaKnown RBP2.45□□□□□ -2.02
SWR1YDR334W MSS18P08593 268 aa2.45□□□□□ -2.02
SWR1YDR334W KSS1P14681 368 aa2.45□□□□□ -2.02
SWR1YDR334W KRS1P15180 591 aaKnown RBP2.45□□□□□ -2.02
SWR1YDR334W CMK2P22517 447 aa2.45□□□□□ -2.02
SWR1YDR334W RPC53P25441 422 aa2.45□□□□□ -2.02
SWR1YDR334W ATG15P25641 520 aa2.45□□□□□ -2.02
SWR1YDR334W ERG3P32353 365 aa2.45□□□□□ -2.02
SWR1YDR334W NTR2P36118 322 aaPredicted RBP2.45□□□□□ -2.02
SWR1YDR334W SAK1P38990 1142 aa2.45□□□□□ -2.02
SWR1YDR334W NPT1P39683 429 aaKnown RBP2.45□□□□□ -2.02
SWR1YDR334W MDV1P47025 714 aa2.45□□□□□ -2.02
SWR1YDR334W COG2P53271 262 aa2.45□□□□□ -2.02
SWR1YDR334W CAF130P53280 1122 aaPredicted RBP2.45□□□□□ -2.02
SWR1YDR334W BRE5P53741 515 aaKnown RBP2.45□□□□□ -2.02
SWR1YDR334W YNR071CP53757 342 aa2.45□□□□□ -2.02
SWR1YDR334W TRS130Q03660 1102 aa2.45□□□□□ -2.02
SWR1YDR334W PLB2Q03674 706 aa2.45□□□□□ -2.02
SWR1YDR334W MUS81Q04149 632 aaPredicted RBP2.45□□□□□ -2.02
SWR1YDR334W CIR2Q08822 631 aa2.45□□□□□ -2.02
SWR1YDR334W PRR2Q12310 699 aa2.45□□□□□ -2.02
SWR1YDR334W YOS9Q99220 542 aa2.45□□□□□ -2.02
SWR1YDR334W CYC1P00044 109 aaPredicted RBP2.45□□□□□ -2.02
SWR1YDR334W PRB1P09232 635 aa2.45□□□□□ -2.02
SWR1YDR334W POL3P15436 1097 aa2.45□□□□□ -2.02
SWR1YDR334W PHO85P17157 305 aa2.45□□□□□ -2.02
SWR1YDR334W CLB4P24871 460 aa2.45□□□□□ -2.02
SWR1YDR334W SKG6P32900 734 aaPredicted RBP2.45□□□□□ -2.02
SWR1YDR334W PTR2P32901 601 aa2.45□□□□□ -2.02
SWR1YDR334W SRP101P32916 621 aa2.45□□□□□ -2.02
SWR1YDR334W HCS1P34243 683 aa2.45□□□□□ -2.02
SWR1YDR334W APN2P38207 520 aa2.45□□□□□ -2.02
SWR1YDR334W RTC2P38279 296 aa2.45□□□□□ -2.02
SWR1YDR334W TDP1P38319 544 aa2.45□□□□□ -2.02
SWR1YDR334W MSR1P38714 643 aa2.45□□□□□ -2.02
SWR1YDR334W YGL114WP53134 725 aa2.45□□□□□ -2.02
SWR1YDR334W YNL040WP53960 456 aaPredicted RBP2.45□□□□□ -2.02
SWR1YDR334W YPL068CQ02749 293 aa2.45□□□□□ -2.02
SWR1YDR334W MFM1Q02783 413 aa2.45□□□□□ -2.02
SWR1YDR334W TAP42Q04372 366 aa2.45□□□□□ -2.02
SWR1YDR334W THP3Q12049 470 aaKnown RBP2.45□□□□□ -2.02
SWR1YDR334W ARP7Q12406 477 aa2.45□□□□□ -2.02
SWR1YDR334W HSH49Q99181 213 aaPredicted RBP2.45□□□□□ -2.02
SWR1YDR334W PDR18P53756 1333 aa2.45□□□□□ -2.02
SWR1YDR334W ECM29P38737 1868 aa2.45□□□□□ -2.02
SWR1YDR334W ARG4P04076 463 aaPredicted RBP2.45□□□□□ -2.02
SWR1YDR334W CHO2P05374 869 aaKnown RBP2.45□□□□□ -2.02
SWR1YDR334W CDC21P06785 304 aa2.45□□□□□ -2.02
SWR1YDR334W NAT1P12945 854 aaKnown RBP2.45□□□□□ -2.02
SWR1YDR334W DBF2P22204 572 aa2.45□□□□□ -2.02
SWR1YDR334W YCR061WP25639 631 aa2.45□□□□□ -2.02
SWR1YDR334W PDC2P32896 925 aa2.45□□□□□ -2.02
SWR1YDR334W YET1P35723 206 aa2.45□□□□□ -2.02
SWR1YDR334W HEL1P36113 551 aa2.45□□□□□ -2.02
SWR1YDR334W APE3P37302 537 aaKnown RBP2.45□□□□□ -2.02
SWR1YDR334W RIM4P38741 713 aa2.45□□□□□ -2.02
SWR1YDR334W YHR131CP38835 850 aa2.45□□□□□ -2.02
SWR1YDR334W FLC2P39719 783 aa2.45□□□□□ -2.02
SWR1YDR334W THI6P41835 540 aa2.45□□□□□ -2.02
SWR1YDR334W PRP31P49704 494 aaPredicted RBP2.45□□□□□ -2.02
SWR1YDR334W MNN10P50108 393 aaKnown RBP2.45□□□□□ -2.02
SWR1YDR334W MKC7P53379 596 aa2.45□□□□□ -2.02
SWR1YDR334W MAP1Q01662 387 aaKnown RBP RIP-Chip data2.45□□□□□ -2.02not detected
SWR1YDR334W SYF1Q04048 859 aaPredicted RBP2.45□□□□□ -2.02
SWR1YDR334W YMR114CQ04471 368 aaKnown RBP2.45□□□□□ -2.02
SWR1YDR334W GAL4P04386 881 aa2.45□□□□□ -2.02
SWR1YDR334W KIN28P06242 306 aa2.45□□□□□ -2.02
SWR1YDR334W KGD1P20967 1014 aaKnown RBP2.45□□□□□ -2.02
SWR1YDR334W PEX1P24004 1043 aa2.45□□□□□ -2.02
SWR1YDR334W OCA4P25366 362 aa2.45□□□□□ -2.02
SWR1YDR334W EGD2P38879 174 aaKnown RBP2.45□□□□□ -2.02
SWR1YDR334W BUL1P48524 976 aa2.45□□□□□ -2.02
SWR1YDR334W PUS2P53167 370 aa2.45□□□□□ -2.02
SWR1YDR334W DYN3Q04949 312 aa2.45□□□□□ -2.02
SWR1YDR334W ADY4Q05955 493 aa2.45□□□□□ -2.02
SWR1YDR334W YOR283WQ12040 230 aaKnown RBP2.45□□□□□ -2.02
SWR1YDR334W NOT5Q12514 560 aaPredicted RBP2.45□□□□□ -2.02
SWR1YDR334W PRC1P00729 532 aa2.44□□□□□ -2.02
SWR1YDR334W PGI1P12709 554 aaKnown RBP2.44□□□□□ -2.02
SWR1YDR334W EST1P17214 699 aaPredicted RBP2.44□□□□□ -2.02
SWR1YDR334W YCL002CP25565 263 aa2.44□□□□□ -2.02
SWR1YDR334W RDS1P25611 832 aa2.44□□□□□ -2.02
SWR1YDR334W NTH1P32356 751 aa2.44□□□□□ -2.02
SWR1YDR334W PDB1P32473 366 aaKnown RBP2.44□□□□□ -2.02
SWR1YDR334W KRE6P32486 720 aa2.44□□□□□ -2.02
SWR1YDR334W CST26P38226 397 aa2.44□□□□□ -2.02
SWR1YDR334W DOG2P38773 246 aa2.44□□□□□ -2.02
SWR1YDR334W SMF2P38778 549 aa2.44□□□□□ -2.02
SWR1YDR334W FRT2P39734 528 aa2.44□□□□□ -2.02
SWR1YDR334W DOT6P40059 670 aaKnown RBP2.44□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms