RNA–Protein interactions for RNA: YDR313C

PIB1, Transcript of RING-type ubiquitin ligase of the endosomal and vacuolar membranes, yeast

Gene PIB1, Length 861 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PIB1	YDR313C	ICS2	P38284	255 aa		4.09	□□□□□ -1.75
PIB1	YDR313C	SHR3	Q02774	210 aa		4.09	□□□□□ -1.75
PIB1	YDR313C	RAD30	Q04049	632 aa		4.09	□□□□□ -1.75
PIB1	YDR313C	SSP2	Q08646	371 aa		4.09	□□□□□ -1.75
PIB1	YDR313C	CAR1	P00812	333 aa	Known RBP	4.08	□□□□□ -1.76
PIB1	YDR313C	SSE2	P32590	693 aa	Known RBP	4.08	□□□□□ -1.76
PIB1	YDR313C	SAC6	P32599	642 aa	Known RBP	4.08	□□□□□ -1.76
PIB1	YDR313C	AUR1	P36107	401 aa	Predicted RBP	4.08	□□□□□ -1.76
PIB1	YDR313C	MAL33	P38157	468 aa		4.08	□□□□□ -1.76
PIB1	YDR313C	RPR2	P40571	144 aa		4.08	□□□□□ -1.76
PIB1	YDR313C	YFR016C	P43597	1233 aa	Known RBP	4.08	□□□□□ -1.76
PIB1	YDR313C	SNG1	P46950	547 aa		4.08	□□□□□ -1.76
PIB1	YDR313C	YJR154W	P47181	346 aa		4.08	□□□□□ -1.76
PIB1	YDR313C	DUG3	P53871	357 aa		4.08	□□□□□ -1.76
PIB1	YDR313C	YMR087W	Q04299	284 aa		4.08	□□□□□ -1.76
PIB1	YDR313C	RPL19A	P0CX82	189 aa	Known RBP	4.07	□□□□□ -1.76
PIB1	YDR313C	RPL19B	P0CX83	189 aa	Predicted RBP	4.07	□□□□□ -1.76
PIB1	YDR313C	APE1	P14904	514 aa		4.07	□□□□□ -1.76
PIB1	YDR313C	AMD1	P15274	810 aa	Known RBP	4.07	□□□□□ -1.76
PIB1	YDR313C	MCK1	P21965	375 aa	Known RBP	4.07	□□□□□ -1.76
PIB1	YDR313C	IMG1	P25626	169 aa		4.07	□□□□□ -1.76
PIB1	YDR313C	YIH1	P25637	258 aa		4.07	□□□□□ -1.76
PIB1	YDR313C	YBR144C	P34215	104 aa		4.07	□□□□□ -1.76
PIB1	YDR313C	RPL32	P38061	130 aa	Known RBP	4.07	□□□□□ -1.76
PIB1	YDR313C	AVT5	P38176	459 aa		4.07	□□□□□ -1.76
PIB1	YDR313C	OSH3	P38713	996 aa	Known RBP	4.07	□□□□□ -1.76
PIB1	YDR313C	CIN4	P39110	191 aa		4.07	□□□□□ -1.76
PIB1	YDR313C	LYS4	P49367	693 aa	Predicted RBP	4.07	□□□□□ -1.76
PIB1	YDR313C	YGL242C	P53066	181 aa		4.07	□□□□□ -1.76
PIB1	YDR313C	YSA1	Q01976	231 aa		4.07	□□□□□ -1.76
PIB1	YDR313C	BUD22	Q04347	519 aa	Known RBP	4.07	□□□□□ -1.76
PIB1	YDR313C	SMA2	Q04658	369 aa		4.07	□□□□□ -1.76
PIB1	YDR313C	BNA5	Q05979	453 aa		4.07	□□□□□ -1.76
PIB1	YDR313C	ARD1	P07347	238 aa	Predicted RBP	4.06	□□□□□ -1.76
PIB1	YDR313C	ATR1	P13090	542 aa		4.06	□□□□□ -1.76
PIB1	YDR313C	SGF29	P25554	259 aa		4.06	□□□□□ -1.76
PIB1	YDR313C	DPH1	P40487	425 aa	Known RBP	4.06	□□□□□ -1.76
PIB1	YDR313C	IDP2	P41939	412 aa		4.06	□□□□□ -1.76
PIB1	YDR313C	YGR126W	P53274	230 aa		4.06	□□□□□ -1.76
PIB1	YDR313C	MSC1	Q03104	513 aa		4.06	□□□□□ -1.76
PIB1	YDR313C	SYO1	Q07395	620 aa		4.06	□□□□□ -1.76
PIB1	YDR313C	YLL056C	Q12177	298 aa		4.06	□□□□□ -1.76
PIB1	YDR313C	YDL009C	Q12210	107 aa		4.06	□□□□□ -1.76
PIB1	YDR313C	RPL20A	P0CX23	172 aa	Known RBP	4.05	□□□□□ -1.76
PIB1	YDR313C	RPL20B	P0CX24	172 aa	Predicted RBP	4.05	□□□□□ -1.76
PIB1	YDR313C	YCR007C	P25354	239 aa		4.05	□□□□□ -1.76
PIB1	YDR313C	YBL029W	P38201	376 aa		4.05	□□□□□ -1.76
PIB1	YDR313C	YHR210C	P38893	341 aa		4.05	□□□□□ -1.76
PIB1	YDR313C	YPI1	P43587	155 aa		4.05	□□□□□ -1.76
PIB1	YDR313C	YMR018W	Q04364	514 aa		4.05	□□□□□ -1.76
PIB1	YDR313C	VIP1	Q06685	1146 aa	Known RBP	4.05	□□□□□ -1.76
PIB1	YDR313C	LUC7	Q07508	261 aa	Predicted RBP	4.05	□□□□□ -1.76
PIB1	YDR313C	FMP40	Q08968	688 aa	Predicted RBP	4.05	□□□□□ -1.76
PIB1	YDR313C	AYT1	Q12226	474 aa		4.05	□□□□□ -1.76
PIB1	YDR313C	KGD1	P20967	1014 aa	Known RBP	4.04	□□□□□ -1.76
PIB1	YDR313C	MTC4	P38335	694 aa	Known RBP	4.04	□□□□□ -1.76
PIB1	YDR313C	TIF5	P38431	405 aa	Known RBP	4.04	□□□□□ -1.76
PIB1	YDR313C	NPR2	P39923	615 aa		4.04	□□□□□ -1.76
PIB1	YDR313C	RTS3	P53289	263 aa		4.04	□□□□□ -1.76
PIB1	YDR313C	VPS74	Q06385	345 aa		4.04	□□□□□ -1.76
PIB1	YDR313C	YOR365C	Q08844	703 aa		4.04	□□□□□ -1.76
PIB1	YDR313C	NCE102	Q12207	173 aa	RIP-Chip data	4.04	□□□□□ -1.76	not detected
PIB1	YDR313C	NOP58	Q12499	511 aa	Known RBP	4.04	□□□□□ -1.76
PIB1	YDR313C	NOP1	P15646	327 aa	Known RBP	4.03	□□□□□ -1.76
PIB1	YDR313C	CHS3	P29465	1165 aa		4.03	□□□□□ -1.76
PIB1	YDR313C	ATS1	P31386	333 aa		4.03	□□□□□ -1.76
PIB1	YDR313C	AGA1	P32323	725 aa		4.03	□□□□□ -1.76
PIB1	YDR313C	VPS52	P39904	641 aa		4.03	□□□□□ -1.76
PIB1	YDR313C	MKT1	P40850	830 aa	Known RBP	4.03	□□□□□ -1.76
PIB1	YDR313C	DSD1	P53095	428 aa		4.03	□□□□□ -1.76
PIB1	YDR313C	YML037C	Q03703	340 aa		4.03	□□□□□ -1.76
PIB1	YDR313C	YKU80	Q04437	629 aa		4.03	□□□□□ -1.76
PIB1	YDR313C	MRPL51	Q06090	140 aa	Predicted RBP	4.03	□□□□□ -1.76
PIB1	YDR313C	KAR3	P17119	729 aa		4.02	□□□□□ -1.77
PIB1	YDR313C	EXO70	P19658	623 aa		4.02	□□□□□ -1.77
PIB1	YDR313C	PMU1	P36069	295 aa		4.02	□□□□□ -1.77
PIB1	YDR313C	ALK1	P43633	760 aa	Known RBP	4.02	□□□□□ -1.77
PIB1	YDR313C	LSP1	Q12230	341 aa	Known RBP	4.02	□□□□□ -1.77
PIB1	YDR313C	PMR1	P13586	950 aa		4.01	□□□□□ -1.77
PIB1	YDR313C	TRX2	P22803	104 aa	Known RBP	4.01	□□□□□ -1.77
PIB1	YDR313C	SGV1	P23293	657 aa	Known RBP	4.01	□□□□□ -1.77
PIB1	YDR313C	SSH4	P32343	579 aa		4.01	□□□□□ -1.77
PIB1	YDR313C	UTR4	P32626	227 aa		4.01	□□□□□ -1.77
PIB1	YDR313C	TUL1	P36096	758 aa		4.01	□□□□□ -1.77
PIB1	YDR313C	ALG8	P40351	577 aa		4.01	□□□□□ -1.77
PIB1	YDR313C	SPG5	P42933	373 aa		4.01	□□□□□ -1.77
PIB1	YDR313C	SCD6	P45978	349 aa	Known RBP RIP-Chip data	4.01	□□□□□ -1.77	RIP-Chip
PIB1	YDR313C	BUD32	P53323	261 aa		4.01	□□□□□ -1.77
PIB1	YDR313C	SLD5	Q03406	294 aa		4.01	□□□□□ -1.77
PIB1	YDR313C	SPE4	Q12455	300 aa		4.01	□□□□□ -1.77
PIB1	YDR313C	SUC2	P00724	532 aa		4	□□□□□ -1.77
PIB1	YDR313C	LPD1	P09624	499 aa	Known RBP	4	□□□□□ -1.77
PIB1	YDR313C	ART10	P18634	518 aa	Known RBP	4	□□□□□ -1.77
PIB1	YDR313C	YCK1	P23291	538 aa		4	□□□□□ -1.77
PIB1	YDR313C	AFG3	P39925	761 aa		4	□□□□□ -1.77
PIB1	YDR313C	SHO1	P40073	367 aa		4	□□□□□ -1.77
PIB1	YDR313C	IRC15	Q02733	499 aa		4	□□□□□ -1.77
PIB1	YDR313C	RLI1	Q03195	608 aa	Known RBP	4	□□□□□ -1.77
PIB1	YDR313C	IOC4	Q04213	475 aa		4	□□□□□ -1.77
PIB1	YDR313C	IVY1	Q04934	453 aa		4	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 11.5 ms