RNA–Protein interactions for RNA: YDR179C

CSN9, Transcript of Subunit of the Cop9 signalosome, yeast

Gene CSN9, Length 489 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CSN9	YDR179C	YKL023W	P36103	277 aa	Known RBP	1.84	□□□□□ -2.11
CSN9	YDR179C	VPS52	P39904	641 aa		1.84	□□□□□ -2.11
CSN9	YDR179C	YGR127W	P53275	312 aa		1.84	□□□□□ -2.11
CSN9	YDR179C	ARC35	P53731	342 aa	Known RBP	1.84	□□□□□ -2.11
CSN9	YDR179C	SHR3	Q02774	210 aa		1.84	□□□□□ -2.11
CSN9	YDR179C	BNA5	Q05979	453 aa		1.84	□□□□□ -2.11
CSN9	YDR179C	MRPL51	Q06090	140 aa	Predicted RBP	1.84	□□□□□ -2.11
CSN9	YDR179C	YOR387C	Q08910	206 aa		1.84	□□□□□ -2.11
CSN9	YDR179C	NYV1	Q12255	253 aa		1.84	□□□□□ -2.11
CSN9	YDR179C	PCD1	Q12524	340 aa		1.84	□□□□□ -2.11
CSN9	YDR179C	RPB2	P08518	1224 aa	Known RBP	1.83	□□□□□ -2.12
CSN9	YDR179C	VMA16	P23968	213 aa		1.83	□□□□□ -2.12
CSN9	YDR179C	SLZ1	P40167	298 aa		1.83	□□□□□ -2.12
CSN9	YDR179C	RPS10B	P46784	105 aa	Known RBP	1.83	□□□□□ -2.12
CSN9	YDR179C	YNR061C	P53747	219 aa		1.83	□□□□□ -2.12
CSN9	YDR179C	DUG3	P53871	357 aa		1.83	□□□□□ -2.12
CSN9	YDR179C	INN1	P53901	409 aa		1.83	□□□□□ -2.12
CSN9	YDR179C	RSM23	Q01163	450 aa		1.83	□□□□□ -2.12
CSN9	YDR179C	MHR1	Q06630	226 aa		1.83	□□□□□ -2.12
CSN9	YDR179C	RPS10A	Q08745	105 aa	Predicted RBP	1.83	□□□□□ -2.12
CSN9	YDR179C	YER078W-A	Q3E7A2	54 aa		1.83	□□□□□ -2.12
CSN9	YDR179C	YEF3	P16521	1044 aa	Known RBP	1.82	□□□□□ -2.12
CSN9	YDR179C	YCR007C	P25354	239 aa		1.82	□□□□□ -2.12
CSN9	YDR179C	IFA38	P38286	347 aa		1.82	□□□□□ -2.12
CSN9	YDR179C	NDT80	P38830	627 aa		1.82	□□□□□ -2.12
CSN9	YDR179C	ELP2	P42935	788 aa		1.82	□□□□□ -2.12
CSN9	YDR179C	PTR3	P43606	678 aa		1.82	□□□□□ -2.12
CSN9	YDR179C	FAR3	P46671	204 aa		1.82	□□□□□ -2.12
CSN9	YDR179C	YJR154W	P47181	346 aa		1.82	□□□□□ -2.12
CSN9	YDR179C	IRC15	Q02733	499 aa		1.82	□□□□□ -2.12
CSN9	YDR179C	RLI1	Q03195	608 aa	Known RBP	1.82	□□□□□ -2.12
CSN9	YDR179C	TFC6	Q06339	672 aa		1.82	□□□□□ -2.12
CSN9	YDR179C	TEN1	Q07921	160 aa		1.82	□□□□□ -2.12
CSN9	YDR179C	TMC1	Q08422	150 aa	Predicted RBP	1.82	□□□□□ -2.12
CSN9	YDR179C	LSP1	Q12230	341 aa	Known RBP	1.82	□□□□□ -2.12
CSN9	YDR179C	SOD1	P00445	154 aa	Known RBP	1.81	□□□□□ -2.12
CSN9	YDR179C	CPR1	P14832	162 aa	Known RBP	1.81	□□□□□ -2.12
CSN9	YDR179C	ISY1	P21374	235 aa	Predicted RBP	1.81	□□□□□ -2.12
CSN9	YDR179C	BOS1	P25385	244 aa		1.81	□□□□□ -2.12
CSN9	YDR179C	SGF29	P25554	259 aa		1.81	□□□□□ -2.12
CSN9	YDR179C	NAM9	P27929	486 aa		1.81	□□□□□ -2.12
CSN9	YDR179C	MTR2	P34232	184 aa	Known RBP	1.81	□□□□□ -2.12
CSN9	YDR179C	YFL067W	P43537	175 aa		1.81	□□□□□ -2.12
CSN9	YDR179C	SNG1	P46950	547 aa		1.81	□□□□□ -2.12
CSN9	YDR179C	WSC2	P53832	503 aa		1.81	□□□□□ -2.12
CSN9	YDR179C	ARK1	P53974	638 aa		1.81	□□□□□ -2.12
CSN9	YDR179C	YLR152C	P54072	576 aa		1.81	□□□□□ -2.12
CSN9	YDR179C	CIA1	Q05583	330 aa		1.81	□□□□□ -2.12
CSN9	YDR179C	PBA1	Q05778	276 aa		1.81	□□□□□ -2.12
CSN9	YDR179C	RRG7	Q08774	242 aa	Predicted RBP	1.81	□□□□□ -2.12
CSN9	YDR179C	CTF3	Q12748	733 aa		1.81	□□□□□ -2.12
CSN9	YDR179C	PWP1	P21304	576 aa	Known RBP	1.8	□□□□□ -2.12
CSN9	YDR179C	MRP4	P32902	394 aa		1.8	□□□□□ -2.12
CSN9	YDR179C	TOM20	P35180	183 aa		1.8	□□□□□ -2.12
CSN9	YDR179C	KTR3	P38130	404 aa	Predicted RBP	1.8	□□□□□ -2.12
CSN9	YDR179C	ICS2	P38284	255 aa		1.8	□□□□□ -2.12
CSN9	YDR179C	PSD1	P39006	500 aa		1.8	□□□□□ -2.12
CSN9	YDR179C	HAT2	P39984	401 aa		1.8	□□□□□ -2.12
CSN9	YDR179C	SCD6	P45978	349 aa	Known RBP RIP-Chip data	1.8	□□□□□ -2.12	not detected
CSN9	YDR179C	AAD10	P47182	288 aa		1.8	□□□□□ -2.12
CSN9	YDR179C	RPS7B	P48164	190 aa	Known RBP	1.8	□□□□□ -2.12
CSN9	YDR179C	PIL1	P53252	339 aa	Known RBP	1.8	□□□□□ -2.12
CSN9	YDR179C	CAF40	P53829	373 aa		1.8	□□□□□ -2.12
CSN9	YDR179C	ELP3	Q02908	557 aa	Known RBP	1.8	□□□□□ -2.12
CSN9	YDR179C	IVY1	Q04934	453 aa		1.8	□□□□□ -2.12
CSN9	YDR179C	ERV2	Q12284	196 aa		1.8	□□□□□ -2.12
CSN9	YDR179C	HEM15	P16622	393 aa		1.79	□□□□□ -2.12
CSN9	YDR179C	YIM1	P28625	365 aa		1.79	□□□□□ -2.12
CSN9	YDR179C	MRP20	P32387	263 aa		1.79	□□□□□ -2.12
CSN9	YDR179C	FRE1	P32791	686 aa		1.79	□□□□□ -2.12
CSN9	YDR179C	SDH3	P33421	198 aa		1.79	□□□□□ -2.12
CSN9	YDR179C	ALY1	P36117	915 aa		1.79	□□□□□ -2.12
CSN9	YDR179C	REE1	P40893	198 aa		1.79	□□□□□ -2.12
CSN9	YDR179C	YGR126W	P53274	230 aa		1.79	□□□□□ -2.12
CSN9	YDR179C	MDG1	P53885	366 aa		1.79	□□□□□ -2.12
CSN9	YDR179C	APJ1	P53940	528 aa		1.79	□□□□□ -2.12
CSN9	YDR179C	EFM6	P53970	246 aa		1.79	□□□□□ -2.12
CSN9	YDR179C	SLD5	Q03406	294 aa		1.79	□□□□□ -2.12
CSN9	YDR179C	DPB4	Q04603	196 aa	Known RBP	1.79	□□□□□ -2.12
CSN9	YDR179C	ESA1	Q08649	445 aa		1.79	□□□□□ -2.12
CSN9	YDR179C	TCO89	Q08921	799 aa		1.79	□□□□□ -2.12
CSN9	YDR179C	PRE8	P23639	250 aa		1.78	□□□□□ -2.12
CSN9	YDR179C	RNA14	P25298	677 aa	Known RBP	1.78	□□□□□ -2.12
CSN9	YDR179C	PUP3	P25451	205 aa	Known RBP	1.78	□□□□□ -2.12
CSN9	YDR179C	YCR022C	P25620	114 aa		1.78	□□□□□ -2.12
CSN9	YDR179C	CRM1	P30822	1084 aa	Known RBP	1.78	□□□□□ -2.12
CSN9	YDR179C	UTR4	P32626	227 aa		1.78	□□□□□ -2.12
CSN9	YDR179C	YBL055C	P34220	418 aa	Predicted RBP	1.78	□□□□□ -2.12
CSN9	YDR179C	PTH2	P34222	208 aa		1.78	□□□□□ -2.12
CSN9	YDR179C	NUP133	P36161	1157 aa		1.78	□□□□□ -2.12
CSN9	YDR179C	RPL32	P38061	130 aa	Known RBP	1.78	□□□□□ -2.12
CSN9	YDR179C	YHR210C	P38893	341 aa		1.78	□□□□□ -2.12
CSN9	YDR179C	CIN4	P39110	191 aa		1.78	□□□□□ -2.12
CSN9	YDR179C	UBX4	P54730	416 aa		1.78	□□□□□ -2.12
CSN9	YDR179C	YMR027W	Q04371	470 aa		1.78	□□□□□ -2.12
CSN9	YDR179C	RTT109	Q07794	436 aa		1.78	□□□□□ -2.12
CSN9	YDR179C	HRT3	Q12347	344 aa		1.78	□□□□□ -2.12
CSN9	YDR179C	SSM4	P40318	1319 aa		1.77	□□□□□ -2.13
CSN9	YDR179C	HIP1	P06775	603 aa		1.77	□□□□□ -2.13
CSN9	YDR179C	RFS1	P38234	210 aa	Known RBP	1.77	□□□□□ -2.13

Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms