RNA–Protein interactions for RNA: YDR086C

SSS1, Transcript of Subunit of the Sec61p translocation complex (Sec61p-Sss1p-Sbh1p), yeastyeast

Gene SSS1, Length 243 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSS1YDR086C ERV2Q12284 196 aa1.54□□□□□ -2.16
SSS1YDR086C PFK2P16862 959 aaKnown RBP RIP-Chip data1.53□□□□□ -2.16not detected
SSS1YDR086C EXO70P19658 623 aa1.53□□□□□ -2.16
SSS1YDR086C RNA14P25298 677 aaKnown RBP1.53□□□□□ -2.16
SSS1YDR086C YIM1P28625 365 aa1.53□□□□□ -2.16
SSS1YDR086C XRS2P33301 854 aa1.53□□□□□ -2.16
SSS1YDR086C MTR2P34232 184 aaKnown RBP1.53□□□□□ -2.16
SSS1YDR086C TEF4P36008 412 aaKnown RBP1.53□□□□□ -2.16
SSS1YDR086C YKL023WP36103 277 aaKnown RBP1.53□□□□□ -2.16
SSS1YDR086C NDT80P38830 627 aa1.53□□□□□ -2.16
SSS1YDR086C PSD1P39006 500 aa1.53□□□□□ -2.16
SSS1YDR086C BUR6P40096 142 aa1.53□□□□□ -2.16
SSS1YDR086C RIC1P40395 1056 aa1.53□□□□□ -2.16
SSS1YDR086C REE1P40893 198 aa1.53□□□□□ -2.16
SSS1YDR086C RPS10BP46784 105 aaKnown RBP1.53□□□□□ -2.16
SSS1YDR086C DIA3P52290 468 aa1.53□□□□□ -2.16
SSS1YDR086C WSC2P53832 503 aa1.53□□□□□ -2.16
SSS1YDR086C ARK1P53974 638 aa1.53□□□□□ -2.16
SSS1YDR086C RSM23Q01163 450 aa1.53□□□□□ -2.16
SSS1YDR086C SHR3Q02774 210 aa1.53□□□□□ -2.16
SSS1YDR086C RLI1Q03195 608 aaKnown RBP1.53□□□□□ -2.16
SSS1YDR086C SKG3Q06315 1026 aa1.53□□□□□ -2.16
SSS1YDR086C PSR1Q07800 427 aa1.53□□□□□ -2.16
SSS1YDR086C RPS10AQ08745 105 aaPredicted RBP1.53□□□□□ -2.16
SSS1YDR086C RRG7Q08774 242 aaPredicted RBP1.53□□□□□ -2.16
SSS1YDR086C CTF3Q12748 733 aa1.53□□□□□ -2.16
SSS1YDR086C YLR302CO13544 120 aa1.52□□□□□ -2.17
SSS1YDR086C YEF3P16521 1044 aaKnown RBP1.52□□□□□ -2.17
SSS1YDR086C SUI2P20459 304 aaKnown RBP1.52□□□□□ -2.17
SSS1YDR086C YKL100CP34248 587 aa1.52□□□□□ -2.17
SSS1YDR086C GRX7P38068 203 aa1.52□□□□□ -2.17
SSS1YDR086C RFS1P38234 210 aaKnown RBP1.52□□□□□ -2.17
SSS1YDR086C ACA1P39970 489 aa1.52□□□□□ -2.17
SSS1YDR086C HAT2P39984 401 aa1.52□□□□□ -2.17
SSS1YDR086C SLZ1P40167 298 aa1.52□□□□□ -2.17
SSS1YDR086C ELP2P42935 788 aa1.52□□□□□ -2.17
SSS1YDR086C YJR154WP47181 346 aa1.52□□□□□ -2.17
SSS1YDR086C YGR127WP53275 312 aa1.52□□□□□ -2.17
SSS1YDR086C IRC15Q02733 499 aa1.52□□□□□ -2.17
SSS1YDR086C ELP3Q02908 557 aaKnown RBP1.52□□□□□ -2.17
SSS1YDR086C YMR027WQ04371 470 aa1.52□□□□□ -2.17
SSS1YDR086C CIA1Q05583 330 aa1.52□□□□□ -2.17
SSS1YDR086C PBA1Q05778 276 aa1.52□□□□□ -2.17
SSS1YDR086C BLS1Q06071 122 aa1.52□□□□□ -2.17
SSS1YDR086C TFC6Q06339 672 aa1.52□□□□□ -2.17
SSS1YDR086C LSP1Q12230 341 aaKnown RBP1.52□□□□□ -2.17
SSS1YDR086C RPB2P08518 1224 aaKnown RBP1.51□□□□□ -2.17
SSS1YDR086C CPR1P14832 162 aaKnown RBP1.51□□□□□ -2.17
SSS1YDR086C HEM15P16622 393 aa1.51□□□□□ -2.17
SSS1YDR086C VMA16P23968 213 aa1.51□□□□□ -2.17
SSS1YDR086C YCR022CP25620 114 aa1.51□□□□□ -2.17
SSS1YDR086C MRP4P32902 394 aa1.51□□□□□ -2.17
SSS1YDR086C UME6P39001 836 aa1.51□□□□□ -2.17
SSS1YDR086C SCD6P45978 349 aaKnown RBP RIP-Chip data1.51□□□□□ -2.17 RIP-Chip
SSS1YDR086C SNG1P46950 547 aa1.51□□□□□ -2.17
SSS1YDR086C TIS11P47977 285 aa1.51□□□□□ -2.17
SSS1YDR086C RPS7BP48164 190 aaKnown RBP1.51□□□□□ -2.17
SSS1YDR086C PIL1P53252 339 aaKnown RBP1.51□□□□□ -2.17
SSS1YDR086C DUG3P53871 357 aa1.51□□□□□ -2.17
SSS1YDR086C SLD5Q03406 294 aa1.51□□□□□ -2.17
SSS1YDR086C TEN1Q07921 160 aa1.51□□□□□ -2.17
SSS1YDR086C TMS1Q12116 473 aa1.51□□□□□ -2.17
SSS1YDR086C NBP2Q12163 236 aa1.51□□□□□ -2.17
SSS1YDR086C HRT3Q12347 344 aa1.51□□□□□ -2.17
SSS1YDR086C APA1P16550 321 aaKnown RBP1.5□□□□□ -2.17
SSS1YDR086C PWP1P21304 576 aaKnown RBP1.5□□□□□ -2.17
SSS1YDR086C SGV1P23293 657 aaKnown RBP1.5□□□□□ -2.17
SSS1YDR086C BOS1P25385 244 aa1.5□□□□□ -2.17
SSS1YDR086C SGF29P25554 259 aa1.5□□□□□ -2.17
SSS1YDR086C CNS1P33313 385 aa1.5□□□□□ -2.17
SSS1YDR086C SDH3P33421 198 aa1.5□□□□□ -2.17
SSS1YDR086C YFL067WP43537 175 aa1.5□□□□□ -2.17
SSS1YDR086C FAR3P46671 204 aa1.5□□□□□ -2.17
SSS1YDR086C RRT6P53117 311 aaPredicted RBP1.5□□□□□ -2.17
SSS1YDR086C SHY1P53266 389 aa1.5□□□□□ -2.17
SSS1YDR086C CAF40P53829 373 aa1.5□□□□□ -2.17
SSS1YDR086C RTT109Q07794 436 aa1.5□□□□□ -2.17
SSS1YDR086C ESA1Q08649 445 aa1.5□□□□□ -2.17
SSS1YDR086C NYV1Q12255 253 aa1.5□□□□□ -2.17
SSS1YDR086C FAB1P34756 2278 aa1.49□□□□□ -2.17
SSS1YDR086C HIP1P06775 603 aa1.49□□□□□ -2.17
SSS1YDR086C UTR4P32626 227 aa1.49□□□□□ -2.17
SSS1YDR086C FRE1P32791 686 aa1.49□□□□□ -2.17
SSS1YDR086C HCS1P34243 683 aa1.49□□□□□ -2.17
SSS1YDR086C KTR3P38130 404 aaPredicted RBP1.49□□□□□ -2.17
SSS1YDR086C YHR210CP38893 341 aa1.49□□□□□ -2.17
SSS1YDR086C PTR3P43606 678 aa1.49□□□□□ -2.17
SSS1YDR086C AAD10P47182 288 aa1.49□□□□□ -2.17
SSS1YDR086C EFM6P53970 246 aa1.49□□□□□ -2.17
SSS1YDR086C IVY1Q04934 453 aa1.49□□□□□ -2.17
SSS1YDR086C RVS161P25343 265 aaKnown RBP1.48□□□□□ -2.17
SSS1YDR086C PUP3P25451 205 aaKnown RBP1.48□□□□□ -2.17
SSS1YDR086C CRM1P30822 1084 aaKnown RBP1.48□□□□□ -2.17
SSS1YDR086C MRP20P32387 263 aa1.48□□□□□ -2.17
SSS1YDR086C YBL055CP34220 418 aaPredicted RBP1.48□□□□□ -2.17
SSS1YDR086C ALY1P36117 915 aa1.48□□□□□ -2.17
SSS1YDR086C NUP133P36161 1157 aa1.48□□□□□ -2.17
SSS1YDR086C SWD3P38123 315 aa1.48□□□□□ -2.17
SSS1YDR086C TMA108P40462 946 aa1.48□□□□□ -2.17
SSS1YDR086C YIL067CP40514 678 aa1.48□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 19.9 ms