RNA–Protein interactions for RNA: YDL088C

ASM4, Transcript of FG-nucleoporin component of central core of nuclear pore complex (NPC), yeastyeast

Gene ASM4, Length 1,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ASM4YDL088C YDL009CQ12210 107 aa2.72□□□□□ -1.97
ASM4YDL088C YCL021W-AQ96VH3 125 aa2.72□□□□□ -1.97
ASM4YDL088C ATR1P13090 542 aa2.71□□□□□ -1.98
ASM4YDL088C BUD5P25300 642 aaPredicted RBP2.71□□□□□ -1.98
ASM4YDL088C RER1P25560 188 aa2.71□□□□□ -1.98
ASM4YDL088C RRT2P38332 387 aa2.71□□□□□ -1.98
ASM4YDL088C ALG8P40351 577 aa2.71□□□□□ -1.98
ASM4YDL088C AAD10P47182 288 aa2.71□□□□□ -1.98
ASM4YDL088C ALT2P52892 507 aa2.71□□□□□ -1.98
ASM4YDL088C RBG2P53295 368 aaKnown RBP2.71□□□□□ -1.98
ASM4YDL088C GTR1Q00582 310 aa2.71□□□□□ -1.98
ASM4YDL088C PAL1Q05518 499 aaKnown RBP2.71□□□□□ -1.98
ASM4YDL088C HEL2Q05580 639 aaKnown RBP2.71□□□□□ -1.98
ASM4YDL088C SYO1Q07395 620 aa2.71□□□□□ -1.98
ASM4YDL088C ENT4Q07872 247 aa2.71□□□□□ -1.98
ASM4YDL088C ETT1Q08421 412 aaKnown RBP2.71□□□□□ -1.98
ASM4YDL088C BOS1P25385 244 aa2.7□□□□□ -1.98
ASM4YDL088C SGF29P25554 259 aa2.7□□□□□ -1.98
ASM4YDL088C YER010CP40011 234 aa2.7□□□□□ -1.98
ASM4YDL088C MRPL51Q06090 140 aaPredicted RBP2.7□□□□□ -1.98
ASM4YDL088C RIX7Q07844 837 aaKnown RBP2.7□□□□□ -1.98
ASM4YDL088C HNT3Q08702 217 aa2.7□□□□□ -1.98
ASM4YDL088C SUI2P20459 304 aaKnown RBP2.7□□□□□ -1.98
ASM4YDL088C PRE8P23639 250 aa2.7□□□□□ -1.98
ASM4YDL088C YCR022CP25620 114 aa2.7□□□□□ -1.98
ASM4YDL088C YEL045CP32616 141 aa2.7□□□□□ -1.98
ASM4YDL088C FRE1P32791 686 aa2.7□□□□□ -1.98
ASM4YDL088C MRS6P32864 603 aaKnown RBP2.7□□□□□ -1.98
ASM4YDL088C KAP123P40069 1113 aaKnown RBP2.7□□□□□ -1.98
ASM4YDL088C SCD6P45978 349 aaKnown RBP RIP-Chip data2.7□□□□□ -1.98 RIP-Chip
ASM4YDL088C BUD32P53323 261 aa2.7□□□□□ -1.98
ASM4YDL088C RTT109Q07794 436 aa2.7□□□□□ -1.98
ASM4YDL088C PMR1P13586 950 aa2.69□□□□□ -1.98
ASM4YDL088C SGV1P23293 657 aaKnown RBP2.69□□□□□ -1.98
ASM4YDL088C IMG1P25626 169 aa2.69□□□□□ -1.98
ASM4YDL088C FUN19P28003 413 aaPredicted RBP2.69□□□□□ -1.98
ASM4YDL088C DEG1P31115 442 aaKnown RBP2.69□□□□□ -1.98
ASM4YDL088C RPL32P38061 130 aaKnown RBP2.69□□□□□ -1.98
ASM4YDL088C FMP10P40098 244 aa2.69□□□□□ -1.98
ASM4YDL088C PRE5P40302 234 aaKnown RBP2.69□□□□□ -1.98
ASM4YDL088C FAR3P46671 204 aa2.69□□□□□ -1.98
ASM4YDL088C DSD1P53095 428 aa2.69□□□□□ -1.98
ASM4YDL088C YGR126WP53274 230 aa2.69□□□□□ -1.98
ASM4YDL088C YDL057WQ07379 328 aa2.69□□□□□ -1.98
ASM4YDL088C YOL087CQ99247 1116 aa2.69□□□□□ -1.98
ASM4YDL088C AMD1P15274 810 aaKnown RBP2.68□□□□□ -1.98
ASM4YDL088C YBL055CP34220 418 aaPredicted RBP2.68□□□□□ -1.98
ASM4YDL088C MAL33P38157 468 aa2.68□□□□□ -1.98
ASM4YDL088C AXL2P38928 823 aa2.68□□□□□ -1.98
ASM4YDL088C AFG3P39925 761 aa2.68□□□□□ -1.98
ASM4YDL088C MSO1P53604 210 aaKnown RBP2.68□□□□□ -1.98
ASM4YDL088C IRC15Q02733 499 aa2.68□□□□□ -1.98
ASM4YDL088C VPS74Q06385 345 aa2.68□□□□□ -1.98
ASM4YDL088C BSC6Q08280 497 aa2.68□□□□□ -1.98
ASM4YDL088C CPR1P14832 162 aaKnown RBP2.67□□□□□ -1.98
ASM4YDL088C PUT3P25502 979 aaPredicted RBP2.67□□□□□ -1.98
ASM4YDL088C CBF2P32504 956 aa2.67□□□□□ -1.98
ASM4YDL088C YGR021WP53212 290 aa2.67□□□□□ -1.98
ASM4YDL088C EFM6P53970 246 aa2.67□□□□□ -1.98
ASM4YDL088C SLD5Q03406 294 aa2.67□□□□□ -1.98
ASM4YDL088C IVY1Q04934 453 aa2.67□□□□□ -1.98
ASM4YDL088C YOR387CQ08910 206 aa2.67□□□□□ -1.98
ASM4YDL088C EXO70P19658 623 aa2.66□□□□□ -1.98
ASM4YDL088C KGD1P20967 1014 aaKnown RBP2.66□□□□□ -1.98
ASM4YDL088C PUP3P25451 205 aaKnown RBP2.66□□□□□ -1.98
ASM4YDL088C SYN8P31377 255 aa2.66□□□□□ -1.98
ASM4YDL088C NUP133P36161 1157 aa2.66□□□□□ -1.98
ASM4YDL088C NDT80P38830 627 aa2.66□□□□□ -1.98
ASM4YDL088C LYS4P49367 693 aaPredicted RBP2.66□□□□□ -1.98
ASM4YDL088C CBK1P53894 756 aa2.66□□□□□ -1.98
ASM4YDL088C RAD30Q04049 632 aa2.66□□□□□ -1.98
ASM4YDL088C BUD22Q04347 519 aaKnown RBP2.66□□□□□ -1.98
ASM4YDL088C LSP1Q12230 341 aaKnown RBP2.66□□□□□ -1.98
ASM4YDL088C CTF3Q12748 733 aa2.66□□□□□ -1.98
ASM4YDL088C PAD1P33751 242 aaKnown RBP RIP-Chip data2.66□□□□□ -1.98not detected
ASM4YDL088C UBP11P36026 717 aa2.66□□□□□ -1.98
ASM4YDL088C ELP2P42935 788 aa2.66□□□□□ -1.98
ASM4YDL088C BNA5Q05979 453 aa2.66□□□□□ -1.98
ASM4YDL088C SKM1Q12469 655 aa2.66□□□□□ -1.98
ASM4YDL088C YER078W-AQ3E7A2 54 aa2.66□□□□□ -1.98
ASM4YDL088C MF(ALPHA)1P01149 165 aa2.65□□□□□ -1.99
ASM4YDL088C LPD1P09624 499 aaKnown RBP2.65□□□□□ -1.99
ASM4YDL088C CDC24P11433 854 aaPredicted RBP2.65□□□□□ -1.99
ASM4YDL088C YCR007CP25354 239 aa2.65□□□□□ -1.99
ASM4YDL088C YBL059WP34224 193 aa2.65□□□□□ -1.99
ASM4YDL088C HAT2P39984 401 aa2.65□□□□□ -1.99
ASM4YDL088C YJR154WP47181 346 aa2.65□□□□□ -1.99
ASM4YDL088C VIP1Q06685 1146 aaKnown RBP2.65□□□□□ -1.99
ASM4YDL088C RRP12Q12754 1228 aaKnown RBP2.65□□□□□ -1.99
ASM4YDL088C ARD1P07347 238 aaPredicted RBP2.64□□□□□ -1.99
ASM4YDL088C SPT15P13393 240 aaKnown RBP2.64□□□□□ -1.99
ASM4YDL088C NAM9P27929 486 aa2.64□□□□□ -1.99
ASM4YDL088C YME1P32795 747 aa2.64□□□□□ -1.99
ASM4YDL088C MRP4P32902 394 aa2.64□□□□□ -1.99
ASM4YDL088C MSN2P33748 704 aa2.64□□□□□ -1.99
ASM4YDL088C YBR144CP34215 104 aa2.64□□□□□ -1.99
ASM4YDL088C AUR1P36107 401 aaPredicted RBP2.64□□□□□ -1.99
ASM4YDL088C CIN4P39110 191 aa2.64□□□□□ -1.99
ASM4YDL088C YFL067WP43537 175 aa2.64□□□□□ -1.99
ASM4YDL088C ARC1P46672 376 aaKnown RBP2.64□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 20 ms