RNA–Protein interactions for RNA: YBR054W

YRO2, Transcript of Protein of unknown function with similarity to archaeal rhodopsins, yeast

Gene YRO2, Length 1,035 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YRO2	YBR054W	FMP40	Q08968	688 aa	Predicted RBP	3.16	□□□□□ -1.9
YRO2	YBR054W	YMR230W-A	Q3E7B5	62 aa		3.16	□□□□□ -1.9
YRO2	YBR054W	AFG3	P39925	761 aa		3.15	□□□□□ -1.91
YRO2	YBR054W	UPF3	P48412	387 aa	Known RBP	3.15	□□□□□ -1.91
YRO2	YBR054W	YGL082W	P53155	381 aa		3.15	□□□□□ -1.91
YRO2	YBR054W	DUG3	P53871	357 aa		3.15	□□□□□ -1.91
YRO2	YBR054W	SAM50	P53969	484 aa		3.15	□□□□□ -1.91
YRO2	YBR054W	RBA50	Q04418	439 aa		3.15	□□□□□ -1.91
YRO2	YBR054W	COG4	Q06096	861 aa		3.15	□□□□□ -1.91
YRO2	YBR054W	YEH1	Q07804	573 aa		3.15	□□□□□ -1.91
YRO2	YBR054W	SDH5	Q08230	162 aa		3.15	□□□□□ -1.91
YRO2	YBR054W	TIP41	Q12199	356 aa		3.15	□□□□□ -1.91
YRO2	YBR054W	ENT1	Q12518	454 aa		3.15	□□□□□ -1.91
YRO2	YBR054W	SEC53	P07283	254 aa	Known RBP	3.14	□□□□□ -1.91
YRO2	YBR054W	MRS3	P10566	314 aa		3.14	□□□□□ -1.91
YRO2	YBR054W	PEP5	P12868	1029 aa		3.14	□□□□□ -1.91
YRO2	YBR054W	AAC3	P18238	307 aa		3.14	□□□□□ -1.91
YRO2	YBR054W	SAN1	P22470	610 aa		3.14	□□□□□ -1.91
YRO2	YBR054W	RPN12	P32496	274 aa		3.14	□□□□□ -1.91
YRO2	YBR054W	RGT1	P32862	1170 aa		3.14	□□□□□ -1.91
YRO2	YBR054W	VPS17	P32913	551 aa		3.14	□□□□□ -1.91
YRO2	YBR054W	TIF3	P34167	436 aa	Known RBP	3.14	□□□□□ -1.91
YRO2	YBR054W	ECM15	P35195	104 aa		3.14	□□□□□ -1.91
YRO2	YBR054W	UBP11	P36026	717 aa		3.14	□□□□□ -1.91
YRO2	YBR054W	YKL023W	P36103	277 aa	Known RBP	3.14	□□□□□ -1.91
YRO2	YBR054W	NOP4	P37838	685 aa	Known RBP	3.14	□□□□□ -1.91
YRO2	YBR054W	CIN4	P39110	191 aa		3.14	□□□□□ -1.91
YRO2	YBR054W	NOC2	P39744	710 aa	Known RBP	3.14	□□□□□ -1.91
YRO2	YBR054W	SNG1	P46950	547 aa		3.14	□□□□□ -1.91
YRO2	YBR054W	YGR126W	P53274	230 aa		3.14	□□□□□ -1.91
YRO2	YBR054W	RPM2	Q02773	1202 aa		3.14	□□□□□ -1.91
YRO2	YBR054W	SHR3	Q02774	210 aa		3.14	□□□□□ -1.91
YRO2	YBR054W	RTT103	Q05543	409 aa		3.14	□□□□□ -1.91
YRO2	YBR054W	YTH1	Q06102	208 aa	Predicted RBP	3.14	□□□□□ -1.91
YRO2	YBR054W	CDC45	Q08032	650 aa		3.14	□□□□□ -1.91
YRO2	YBR054W	NCE102	Q12207	173 aa	RIP-Chip data	3.14	□□□□□ -1.91	not detected
YRO2	YBR054W	MRP13	P12686	339 aa		3.13	□□□□□ -1.91
YRO2	YBR054W	PDA1	P16387	420 aa	Known RBP	3.13	□□□□□ -1.91
YRO2	YBR054W	ART10	P18634	518 aa	Known RBP	3.13	□□□□□ -1.91
YRO2	YBR054W	SUI2	P20459	304 aa	Known RBP	3.13	□□□□□ -1.91
YRO2	YBR054W	SEC62	P21825	274 aa		3.13	□□□□□ -1.91
YRO2	YBR054W	SGV1	P23293	657 aa	Known RBP	3.13	□□□□□ -1.91
YRO2	YBR054W	GFD2	P25370	566 aa	Known RBP	3.13	□□□□□ -1.91
YRO2	YBR054W	SGF29	P25554	259 aa		3.13	□□□□□ -1.91
YRO2	YBR054W	MPE1	P35728	441 aa	Known RBP	3.13	□□□□□ -1.91
YRO2	YBR054W	YNK1	P36010	153 aa	Known RBP	3.13	□□□□□ -1.91
YRO2	YBR054W	TMA108	P40462	946 aa		3.13	□□□□□ -1.91
YRO2	YBR054W	CSM2	P40465	213 aa		3.13	□□□□□ -1.91
YRO2	YBR054W	IKS1	P47042	667 aa		3.13	□□□□□ -1.91
YRO2	YBR054W	ALT2	P52892	507 aa		3.13	□□□□□ -1.91
YRO2	YBR054W	DSD1	P53095	428 aa		3.13	□□□□□ -1.91
YRO2	YBR054W	YMR087W	Q04299	284 aa		3.13	□□□□□ -1.91
YRO2	YBR054W	GLO2	Q05584	274 aa		3.13	□□□□□ -1.91
YRO2	YBR054W	HCR1	Q05775	265 aa	Known RBP	3.13	□□□□□ -1.91
YRO2	YBR054W	YPT6	Q99260	215 aa		3.13	□□□□□ -1.91
YRO2	YBR054W	EST1	P17214	699 aa	Predicted RBP	3.12	□□□□□ -1.91
YRO2	YBR054W	SEF1	P34228	1148 aa		3.12	□□□□□ -1.91
YRO2	YBR054W	YHR210C	P38893	341 aa		3.12	□□□□□ -1.91
YRO2	YBR054W	DHH1	P39517	506 aa	Known RBP	3.12	□□□□□ -1.91
YRO2	YBR054W	VID30	P53076	958 aa		3.12	□□□□□ -1.91
YRO2	YBR054W	DRN1	P53255	507 aa	Known RBP	3.12	□□□□□ -1.91
YRO2	YBR054W	BUD32	P53323	261 aa		3.12	□□□□□ -1.91
YRO2	YBR054W	YOR365C	Q08844	703 aa		3.12	□□□□□ -1.91
YRO2	YBR054W	CTI6	Q08923	506 aa		3.12	□□□□□ -1.91
YRO2	YBR054W	RCN2	Q12044	265 aa		3.12	□□□□□ -1.91
YRO2	YBR054W	SGS1	P35187	1447 aa		3.11	□□□□□ -1.91
YRO2	YBR054W	APE1	P14904	514 aa		3.11	□□□□□ -1.91
YRO2	YBR054W	OLE1	P21147	510 aa	Known RBP	3.11	□□□□□ -1.91
YRO2	YBR054W	PRO3	P32263	286 aa	Known RBP	3.11	□□□□□ -1.91
YRO2	YBR054W	SIP2	P34164	415 aa	Known RBP	3.11	□□□□□ -1.91
YRO2	YBR054W	OSH3	P38713	996 aa	Known RBP	3.11	□□□□□ -1.91
YRO2	YBR054W	ALG5	P40350	334 aa		3.11	□□□□□ -1.91
YRO2	YBR054W	YJR154W	P47181	346 aa		3.11	□□□□□ -1.91
YRO2	YBR054W	MRX6	P48564	524 aa		3.11	□□□□□ -1.91
YRO2	YBR054W	IPI3	P53877	555 aa		3.11	□□□□□ -1.91
YRO2	YBR054W	MDG1	P53885	366 aa		3.11	□□□□□ -1.91
YRO2	YBR054W	YDL057W	Q07379	328 aa		3.11	□□□□□ -1.91
YRO2	YBR054W	YJR112W-A	Q3E743	109 aa		3.11	□□□□□ -1.91
YRO2	YBR054W	YBR298C-A	Q8TGK4	73 aa		3.11	□□□□□ -1.91
YRO2	YBR054W	PEP4	P07267	405 aa	Known RBP	3.1	□□□□□ -1.91
YRO2	YBR054W	IMP2'	P32351	346 aa		3.1	□□□□□ -1.91
YRO2	YBR054W	LOS1	P33418	1100 aa	Predicted RBP	3.1	□□□□□ -1.91
YRO2	YBR054W	TCD2	P36101	447 aa	Known RBP	3.1	□□□□□ -1.91
YRO2	YBR054W	IMD4	P50094	524 aa	Known RBP	3.1	□□□□□ -1.91
YRO2	YBR054W	YGR066C	P53242	292 aa		3.1	□□□□□ -1.91
YRO2	YBR054W	COQ9	Q05779	260 aa		3.1	□□□□□ -1.91
YRO2	YBR054W	BNA5	Q05979	453 aa		3.1	□□□□□ -1.91
YRO2	YBR054W	HSH49	Q99181	213 aa	Predicted RBP	3.1	□□□□□ -1.91
YRO2	YBR054W	INH1	P01097	85 aa		3.09	□□□□□ -1.91
YRO2	YBR054W	RPL15A	P05748	204 aa	Known RBP	3.09	□□□□□ -1.91
YRO2	YBR054W	RAD52	P06778	471 aa	Known RBP	3.09	□□□□□ -1.91
YRO2	YBR054W	CBS1	P14066	229 aa		3.09	□□□□□ -1.91
YRO2	YBR054W	SHP1	P34223	423 aa		3.09	□□□□□ -1.91
YRO2	YBR054W	MSR1	P38714	643 aa		3.09	□□□□□ -1.91
YRO2	YBR054W	MDM31	P38880	579 aa		3.09	□□□□□ -1.91
YRO2	YBR054W	VPS52	P39904	641 aa		3.09	□□□□□ -1.91
YRO2	YBR054W	SGN1	P40561	250 aa	Known RBP RIP-Chip data	3.09	□□□□□ -1.91	not detected
YRO2	YBR054W	ALK1	P43633	760 aa	Known RBP	3.09	□□□□□ -1.91
YRO2	YBR054W	RTT101	P47050	842 aa		3.09	□□□□□ -1.91
YRO2	YBR054W	TOF2	Q02208	771 aa		3.09	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 33.5 ms