RNA–Protein interactions for RNA: ENST00000640859.1

GFAP-238, Transcript of glial fibrillary acidic protein, human

TSL 5

Gene GFAP, Length 1,162 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GFAP-238	ENST00000640859	TDRD3	Q9H7E2	651 aa	Known RBP	12.78	□□□□□ -0.36
GFAP-238	ENST00000640859	GPCPD1	Q9NPB8	672 aa		12.78	□□□□□ -0.36
GFAP-238	ENST00000640859	TMOD2	Q9NZR1	351 aa		12.78	□□□□□ -0.36
GFAP-238	ENST00000640859	NYAP2	Q9P242	653 aa		12.78	□□□□□ -0.36
GFAP-238	ENST00000640859	ATRNL1	Q5VV63	1379 aa		12.78	□□□□□ -0.36
GFAP-238	ENST00000640859	LAD1	O00515	517 aa		12.77	□□□□□ -0.37
GFAP-238	ENST00000640859	MPHOSPH10	O00566	681 aa	Known RBP	12.77	□□□□□ -0.37
GFAP-238	ENST00000640859	SMC2	O95347	1197 aa		12.77	□□□□□ -0.37
GFAP-238	ENST00000640859	PRPH	P41219	470 aa		12.77	□□□□□ -0.37
GFAP-238	ENST00000640859	ZNF280A	P59817	542 aa	Predicted RBP	12.77	□□□□□ -0.37
GFAP-238	ENST00000640859	MYL5	Q02045	173 aa		12.77	□□□□□ -0.37
GFAP-238	ENST00000640859	DPYD	Q12882	1025 aa		12.77	□□□□□ -0.37
GFAP-238	ENST00000640859	NONO	Q15233	471 aa	Known RBP eCLIP	12.77	□□□□□ -0.37
GFAP-238	ENST00000640859	CCDC144B	Q3MJ40	725 aa		12.77	□□□□□ -0.37
GFAP-238	ENST00000640859	CERKL	Q49MI3	558 aa	Predicted RBP	12.77	□□□□□ -0.37
GFAP-238	ENST00000640859	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	12.77	□□□□□ -0.37
GFAP-238	ENST00000640859	GPATCH4	Q5T3I0	446 aa	Known RBP	12.77	□□□□□ -0.37
GFAP-238	ENST00000640859	TTBK2	Q6IQ55	1244 aa		12.77	□□□□□ -0.37
GFAP-238	ENST00000640859	PDXDC2P	Q6P474	469 aa		12.77	□□□□□ -0.37
GFAP-238	ENST00000640859	KIAA1524	Q8TCG1	905 aa		12.77	□□□□□ -0.37
GFAP-238	ENST00000640859	PRMT6	Q96LA8	375 aa	Predicted RBP	12.77	□□□□□ -0.37
GFAP-238	ENST00000640859	JMJD4	Q9H9V9	463 aa		12.77	□□□□□ -0.37
GFAP-238	ENST00000640859	SPTLC3	Q9NUV7	552 aa		12.77	□□□□□ -0.37
GFAP-238	ENST00000640859	PYCARD	Q9ULZ3	195 aa		12.77	□□□□□ -0.37
GFAP-238	ENST00000640859	PNMA6F	A0A0J9YX94	578 aa		12.76	□□□□□ -0.37
GFAP-238	ENST00000640859	ORC2	Q13416	577 aa	Predicted RBP	12.76	□□□□□ -0.37
GFAP-238	ENST00000640859	TNFAIP1	Q13829	316 aa		12.76	□□□□□ -0.37
GFAP-238	ENST00000640859	NOLC1	Q14978	699 aa	Known RBP eCLIP	12.76	□□□□□ -0.37
GFAP-238	ENST00000640859	CT47A1	Q5JQC4	288 aa	Predicted RBP	12.76	□□□□□ -0.37
GFAP-238	ENST00000640859	PPP1R18	Q6NYC8	613 aa		12.76	□□□□□ -0.37
GFAP-238	ENST00000640859	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	12.76	□□□□□ -0.37
GFAP-238	ENST00000640859	SIAH1	Q8IUQ4	282 aa		12.76	□□□□□ -0.37
GFAP-238	ENST00000640859	SULF1	Q8IWU6	871 aa		12.76	□□□□□ -0.37
GFAP-238	ENST00000640859	ADGRF4	Q8IZF3	695 aa		12.76	□□□□□ -0.37
GFAP-238	ENST00000640859	IQUB	Q8NA54	791 aa		12.76	□□□□□ -0.37
GFAP-238	ENST00000640859	RBM46	Q8TBY0	533 aa	Known RBP	12.76	□□□□□ -0.37
GFAP-238	ENST00000640859	ENOX1	Q8TC92	643 aa	Known RBP	12.76	□□□□□ -0.37
GFAP-238	ENST00000640859	DCAF4	Q8WV16	495 aa		12.76	□□□□□ -0.37
GFAP-238	ENST00000640859	KANSL2	Q9H9L4	492 aa		12.76	□□□□□ -0.37
GFAP-238	ENST00000640859	DACH1	Q9UI36	760 aa		12.76	□□□□□ -0.37
GFAP-238	ENST00000640859	FARP1	Q9Y4F1	1045 aa	Predicted RBP	12.76	□□□□□ -0.37
GFAP-238	ENST00000640859	FAM196B	A6NMK8	535 aa		12.75	□□□□□ -0.37
GFAP-238	ENST00000640859	GTPBP6	O43824	516 aa	Predicted RBP	12.75	□□□□□ -0.37
GFAP-238	ENST00000640859	EEF2	P13639	858 aa	Known RBP	12.75	□□□□□ -0.37
GFAP-238	ENST00000640859	AFM	P43652	599 aa		12.75	□□□□□ -0.37
GFAP-238	ENST00000640859	TNNI2	P48788	182 aa		12.75	□□□□□ -0.37
GFAP-238	ENST00000640859	FANCC	Q00597	558 aa		12.75	□□□□□ -0.37
GFAP-238	ENST00000640859	FSTL1	Q12841	308 aa		12.75	□□□□□ -0.37
GFAP-238	ENST00000640859	SHROOM1	Q2M3G4	852 aa	Predicted RBP	12.75	□□□□□ -0.37
GFAP-238	ENST00000640859	DTHD1	Q6ZMT9	781 aa		12.75	□□□□□ -0.37
GFAP-238	ENST00000640859	TMEM179	Q6ZVK1	233 aa		12.75	□□□□□ -0.37
GFAP-238	ENST00000640859	SAMD7	Q7Z3H4	446 aa		12.75	□□□□□ -0.37
GFAP-238	ENST00000640859	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	12.75	□□□□□ -0.37
GFAP-238	ENST00000640859	CACTIN	Q8WUQ7	758 aa	Known RBP	12.75	□□□□□ -0.37
GFAP-238	ENST00000640859	COA7	Q96BR5	231 aa		12.75	□□□□□ -0.37
GFAP-238	ENST00000640859	WDR90	Q96KV7	1748 aa		12.75	□□□□□ -0.37
GFAP-238	ENST00000640859	GSDMA	Q96QA5	445 aa		12.75	□□□□□ -0.37
GFAP-238	ENST00000640859	XPO4	Q9C0E2	1151 aa	Known RBP	12.75	□□□□□ -0.37
GFAP-238	ENST00000640859	CCSER1	Q9C0I3	900 aa		12.75	□□□□□ -0.37
GFAP-238	ENST00000640859	IFNK	Q9P0W0	207 aa		12.75	□□□□□ -0.37
GFAP-238	ENST00000640859	SCN4A	P35499	1836 aa		12.74	□□□□□ -0.37
GFAP-238	ENST00000640859	USP17L10	C9JJH3	530 aa		12.74	□□□□□ -0.37
GFAP-238	ENST00000640859	KIF3C	O14782	793 aa		12.74	□□□□□ -0.37
GFAP-238	ENST00000640859	EDIL3	O43854	480 aa		12.74	□□□□□ -0.37
GFAP-238	ENST00000640859	NEMF	O60524	1076 aa		12.74	□□□□□ -0.37
GFAP-238	ENST00000640859	PPP1R11	O60927	126 aa	Predicted RBP	12.74	□□□□□ -0.37
GFAP-238	ENST00000640859	ERCC5	P28715	1186 aa	Predicted RBP	12.74	□□□□□ -0.37
GFAP-238	ENST00000640859	ADCY7	P51828	1080 aa		12.74	□□□□□ -0.37
GFAP-238	ENST00000640859	ATP2B2	Q01814	1243 aa		12.74	□□□□□ -0.37
GFAP-238	ENST00000640859	FMR1	Q06787	632 aa	Known RBP eCLIP	12.74	□□□□□ -0.37
GFAP-238	ENST00000640859	LRMP	Q12912	555 aa		12.74	□□□□□ -0.37
GFAP-238	ENST00000640859	SEPT2	Q15019	361 aa		12.74	□□□□□ -0.37
GFAP-238	ENST00000640859	CCDC96	Q2M329	555 aa		12.74	□□□□□ -0.37
GFAP-238	ENST00000640859	JAKMIP3	Q5VZ66	844 aa		12.74	□□□□□ -0.37
GFAP-238	ENST00000640859	SLFN13	Q68D06	897 aa		12.74	□□□□□ -0.37
GFAP-238	ENST00000640859	NEK8	Q86SG6	692 aa		12.74	□□□□□ -0.37
GFAP-238	ENST00000640859	REXO1	Q8N1G1	1221 aa	Known RBP	12.74	□□□□□ -0.37
GFAP-238	ENST00000640859	MED15	Q96RN5	788 aa		12.74	□□□□□ -0.37
GFAP-238	ENST00000640859	MTR	Q99707	1265 aa		12.74	□□□□□ -0.37
GFAP-238	ENST00000640859	TRIM34	Q9BYJ4	488 aa		12.74	□□□□□ -0.37
GFAP-238	ENST00000640859	RIC8A	Q9NPQ8	531 aa		12.74	□□□□□ -0.37
GFAP-238	ENST00000640859	TMEM260	Q9NX78	707 aa		12.74	□□□□□ -0.37
GFAP-238	ENST00000640859	IMPACT	Q9P2X3	320 aa		12.74	□□□□□ -0.37
GFAP-238	ENST00000640859	BIN2	Q9UBW5	565 aa	Predicted RBP	12.74	□□□□□ -0.37
GFAP-238	ENST00000640859	ZNF70	Q9UC06	446 aa	Predicted RBP	12.74	□□□□□ -0.37
GFAP-238	ENST00000640859	ZBTB5	O15062	677 aa		12.73	□□□□□ -0.37
GFAP-238	ENST00000640859	OR52Z1	P0C646	297 aa		12.73	□□□□□ -0.37
GFAP-238	ENST00000640859	ATP1A3	P13637	1013 aa		12.73	□□□□□ -0.37
GFAP-238	ENST00000640859	CASP1	P29466	404 aa		12.73	□□□□□ -0.37
GFAP-238	ENST00000640859	NF2	P35240	595 aa		12.73	□□□□□ -0.37
GFAP-238	ENST00000640859	SLC16A2	P36021	539 aa		12.73	□□□□□ -0.37
GFAP-238	ENST00000640859	TXLNA	P40222	546 aa		12.73	□□□□□ -0.37
GFAP-238	ENST00000640859	CLK2	P49760	499 aa	Known RBP	12.73	□□□□□ -0.37
GFAP-238	ENST00000640859	JAG1	P78504	1218 aa		12.73	□□□□□ -0.37
GFAP-238	ENST00000640859	RRP1B	Q14684	758 aa	Known RBP	12.73	□□□□□ -0.37
GFAP-238	ENST00000640859	ABCB5	Q2M3G0	1257 aa		12.73	□□□□□ -0.37
GFAP-238	ENST00000640859	LETM2	Q2VYF4	491 aa		12.73	□□□□□ -0.37
GFAP-238	ENST00000640859	KCTD1	Q719H9	257 aa		12.73	□□□□□ -0.37
GFAP-238	ENST00000640859	APOBEC3F	Q8IUX4	373 aa	Known RBP	12.73	□□□□□ -0.37
GFAP-238	ENST00000640859	C17orf53	Q8N3J3	647 aa	Predicted RBP	12.73	□□□□□ -0.37

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