RNA–Protein interactions for RNA: ENST00000640748.1

ERGIC3-220, Transcript of ERGIC and golgi 3, humanhuman

TSL 5 BASIC

Gene ERGIC3, Length 832 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-220ENST00000640748 ZNFX1Q9P2E3 1918 aaKnown RBP13.84□□□□□ -0.19
ERGIC3-220ENST00000640748 ADAMTS4O75173 837 aa13.83□□□□□ -0.2
ERGIC3-220ENST00000640748 BRD1O95696 1058 aa13.83□□□□□ -0.2
ERGIC3-220ENST00000640748 RARBP10826 455 aa13.83□□□□□ -0.2
ERGIC3-220ENST00000640748 GJB2P29033 226 aa13.83□□□□□ -0.2
ERGIC3-220ENST00000640748 ST3GAL1Q11201 340 aa13.83□□□□□ -0.2
ERGIC3-220ENST00000640748 KCTD2Q14681 263 aa13.83□□□□□ -0.2
ERGIC3-220ENST00000640748 SBK1Q52WX2 424 aa13.83□□□□□ -0.2
ERGIC3-220ENST00000640748 AKNAD1Q5T1N1 836 aa13.83□□□□□ -0.2
ERGIC3-220ENST00000640748 CLEC17AQ6ZS10 378 aa13.83□□□□□ -0.2
ERGIC3-220ENST00000640748 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.83□□□□□ -0.2
ERGIC3-220ENST00000640748 CDX2Q99626 313 aaPredicted RBP13.83□□□□□ -0.2
ERGIC3-220ENST00000640748 COL25A1Q9BXS0 654 aaPredicted RBP13.83□□□□□ -0.2
ERGIC3-220ENST00000640748 KRT23Q9C075 422 aa13.83□□□□□ -0.2
ERGIC3-220ENST00000640748 TTYH1Q9H313 450 aaPredicted RBP13.83□□□□□ -0.2
ERGIC3-220ENST00000640748 RNF41Q9H4P4 317 aaPredicted RBP13.83□□□□□ -0.2
ERGIC3-220ENST00000640748 ARPP21Q9UBL0 812 aaPredicted RBP13.83□□□□□ -0.2
ERGIC3-220ENST00000640748 RIPK3Q9Y572 518 aa13.83□□□□□ -0.2
ERGIC3-220ENST00000640748 DNAJC25-GNG10A0A024R161 153 aa13.82□□□□□ -0.2
ERGIC3-220ENST00000640748 IGKV6D-41A0A0C4DH26 115 aa13.82□□□□□ -0.2
ERGIC3-220ENST00000640748 A0A1W2PQ45 241 aaPredicted RBP13.82□□□□□ -0.2
ERGIC3-220ENST00000640748 A0A1W2PQY0 241 aa13.82□□□□□ -0.2
ERGIC3-220ENST00000640748 GOLGA6L22H0YM25 854 aa13.82□□□□□ -0.2
ERGIC3-220ENST00000640748 PFKFB2O60825 505 aa13.82□□□□□ -0.2
ERGIC3-220ENST00000640748 SNAI1O95863 264 aaPredicted RBP13.82□□□□□ -0.2
ERGIC3-220ENST00000640748 PDIA4P13667 645 aaKnown RBP13.82□□□□□ -0.2
ERGIC3-220ENST00000640748 CTDSPL2Q05D32 466 aa13.82□□□□□ -0.2
ERGIC3-220ENST00000640748 APOBRQ0VD83 1088 aa13.82□□□□□ -0.2
ERGIC3-220ENST00000640748 STK3Q13188 491 aa13.82□□□□□ -0.2
ERGIC3-220ENST00000640748 PKP1Q13835 747 aa13.82□□□□□ -0.2
ERGIC3-220ENST00000640748 ZNF697Q5TEC3 545 aa13.82□□□□□ -0.2
ERGIC3-220ENST00000640748 MFSD6Q6ZSS7 791 aa13.82□□□□□ -0.2
ERGIC3-220ENST00000640748 CHST3Q7LGC8 479 aa13.82□□□□□ -0.2
ERGIC3-220ENST00000640748 AMOTL1Q8IY63 956 aa13.82□□□□□ -0.2
ERGIC3-220ENST00000640748 STAG1Q8WVM7 1258 aa13.82□□□□□ -0.2
ERGIC3-220ENST00000640748 GTF3C6Q969F1 213 aa13.82□□□□□ -0.2
ERGIC3-220ENST00000640748 ZNF274Q96GC6 653 aaPredicted RBP13.82□□□□□ -0.2
ERGIC3-220ENST00000640748 SEMA6BQ9H3T3 888 aa13.82□□□□□ -0.2
ERGIC3-220ENST00000640748 ANAPC4Q9UJX5 808 aa13.82□□□□□ -0.2
ERGIC3-220ENST00000640748 ZDHHC9Q9Y397 364 aa13.82□□□□□ -0.2
ERGIC3-220ENST00000640748 F5H6K3 240 aa13.81□□□□□ -0.2
ERGIC3-220ENST00000640748 KIAA0355O15063 1070 aa13.81□□□□□ -0.2
ERGIC3-220ENST00000640748 RAD21O60216 631 aa13.81□□□□□ -0.2
ERGIC3-220ENST00000640748 BAG4O95429 457 aaKnown RBP13.81□□□□□ -0.2
ERGIC3-220ENST00000640748 NDUFB10O96000 172 aa13.81□□□□□ -0.2
ERGIC3-220ENST00000640748 CLTBP09497 229 aa13.81□□□□□ -0.2
ERGIC3-220ENST00000640748 ANTXR2P58335 489 aa13.81□□□□□ -0.2
ERGIC3-220ENST00000640748 SMAD3P84022 425 aaKnown RBP13.81□□□□□ -0.2
ERGIC3-220ENST00000640748 KLRC3Q07444 240 aa13.81□□□□□ -0.2
ERGIC3-220ENST00000640748 PPARAQ07869 468 aa13.81□□□□□ -0.2
ERGIC3-220ENST00000640748 CCSAPQ6IQ19 270 aaPredicted RBP13.81□□□□□ -0.2
ERGIC3-220ENST00000640748 RNF180Q86T96 592 aa13.81□□□□□ -0.2
ERGIC3-220ENST00000640748 TMEM87BQ96K49 555 aa13.81□□□□□ -0.2
ERGIC3-220ENST00000640748 FGD4Q96M96 766 aa13.81□□□□□ -0.2
ERGIC3-220ENST00000640748 SLF1Q9BQI6 1058 aa13.81□□□□□ -0.2
ERGIC3-220ENST00000640748 TEX13BQ9BXU2 312 aa13.81□□□□□ -0.2
ERGIC3-220ENST00000640748 NYAP2Q9P242 653 aa13.81□□□□□ -0.2
ERGIC3-220ENST00000640748 TACC3Q9Y6A5 838 aa13.81□□□□□ -0.2
ERGIC3-220ENST00000640748 PLXNA1Q9UIW2 1896 aa13.8□□□□□ -0.2
ERGIC3-220ENST00000640748 MYADML2A6NDP7 307 aa13.8□□□□□ -0.2
ERGIC3-220ENST00000640748 MINDY4BA8MYZ0 360 aa13.8□□□□□ -0.2
ERGIC3-220ENST00000640748 B4E1Z4 1266 aa13.8□□□□□ -0.2
ERGIC3-220ENST00000640748 ATP2A1O14983 1001 aa13.8□□□□□ -0.2
ERGIC3-220ENST00000640748 AKR1A1P14550 325 aa13.8□□□□□ -0.2
ERGIC3-220ENST00000640748 COPB2P35606 906 aa13.8□□□□□ -0.2
ERGIC3-220ENST00000640748 EVCP57679 992 aa13.8□□□□□ -0.2
ERGIC3-220ENST00000640748 IRX5P78411 483 aaPredicted RBP13.8□□□□□ -0.2
ERGIC3-220ENST00000640748 SNRNP48Q6IEG0 339 aaKnown RBP13.8□□□□□ -0.2
ERGIC3-220ENST00000640748 MAMDC4Q6UXC1 1216 aa13.8□□□□□ -0.2
ERGIC3-220ENST00000640748 ANKRD33Q7Z3H0 272 aa13.8□□□□□ -0.2
ERGIC3-220ENST00000640748 STK11IPQ8N1F8 1099 aa13.8□□□□□ -0.2
ERGIC3-220ENST00000640748 MSL3Q8N5Y2 521 aaKnown RBP13.8□□□□□ -0.2
ERGIC3-220ENST00000640748 KLHDC9Q8NEP7 349 aa13.8□□□□□ -0.2
ERGIC3-220ENST00000640748 LLPHQ9BRT6 129 aaKnown RBP13.8□□□□□ -0.2
ERGIC3-220ENST00000640748 NAP1L2Q9ULW6 460 aaPredicted RBP13.8□□□□□ -0.2
ERGIC3-220ENST00000640748 NEDD4P46934 1319 aa13.8□□□□□ -0.2
ERGIC3-220ENST00000640748 SYNRGQ9UMZ2 1314 aa13.8□□□□□ -0.2
ERGIC3-220ENST00000640748 ADCY6O43306 1168 aa13.79□□□□□ -0.2
ERGIC3-220ENST00000640748 STX6O43752 255 aa13.79□□□□□ -0.2
ERGIC3-220ENST00000640748 PQBP1O60828 265 aaKnown RBP13.79□□□□□ -0.2
ERGIC3-220ENST00000640748 PCP11498 1178 aaKnown RBP13.79□□□□□ -0.2
ERGIC3-220ENST00000640748 PDCP20941 246 aa13.79□□□□□ -0.2
ERGIC3-220ENST00000640748 ACLYP53396 1101 aa13.79□□□□□ -0.2
ERGIC3-220ENST00000640748 FAAP100Q0VG06 881 aa13.79□□□□□ -0.2
ERGIC3-220ENST00000640748 SCRN1Q12765 414 aa13.79□□□□□ -0.2
ERGIC3-220ENST00000640748 CYB5R4Q7L1T6 521 aa13.79□□□□□ -0.2
ERGIC3-220ENST00000640748 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.79□□□□□ -0.2
ERGIC3-220ENST00000640748 TSEN34Q9BSV6 310 aaKnown RBP13.79□□□□□ -0.2
ERGIC3-220ENST00000640748 MTA3Q9BTC8 594 aa13.79□□□□□ -0.2
ERGIC3-220ENST00000640748 CNPY2Q9Y2B0 182 aa13.79□□□□□ -0.2
ERGIC3-220ENST00000640748 SYNGAP1Q96PV0 1343 aa13.79□□□□□ -0.2
ERGIC3-220ENST00000640748 SPTBN5Q9NRC6 3674 aaKnown RBP13.79□□□□□ -0.2
ERGIC3-220ENST00000640748 KLF18A0A0U1RQI7 1052 aa13.78□□□□□ -0.2
ERGIC3-220ENST00000640748 SH2B2O14492 632 aaPredicted RBP13.78□□□□□ -0.2
ERGIC3-220ENST00000640748 SLC3A2P08195 630 aaKnown RBP13.78□□□□□ -0.2
ERGIC3-220ENST00000640748 SYT1P21579 422 aa13.78□□□□□ -0.2
ERGIC3-220ENST00000640748 PDIA3P30101 505 aaKnown RBP13.78□□□□□ -0.2
ERGIC3-220ENST00000640748 RRP12Q5JTH9 1297 aaKnown RBP13.78□□□□□ -0.2
ERGIC3-220ENST00000640748 ZNF467Q7Z7K2 595 aaPredicted RBP13.78□□□□□ -0.2
ERGIC3-220ENST00000640748 PRPF38AQ8NAV1 312 aaKnown RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms