RNA–Protein interactions for RNA: ENST00000640525.1

RTTN-219, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 2,136 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-219ENST00000640525 GREB1LQ9C091 1923 aaPredicted RBP6.02□□□□□ -1.44
RTTN-219ENST00000640525 PTPDC1A2A3K4 754 aa6.02□□□□□ -1.45
RTTN-219ENST00000640525 TRIM75PA6NK02 468 aa6.02□□□□□ -1.45
RTTN-219ENST00000640525 F5H6K3 240 aa6.02□□□□□ -1.45
RTTN-219ENST00000640525 CPLX1O14810 134 aa6.02□□□□□ -1.45
RTTN-219ENST00000640525 PTPRAP18433 802 aa6.02□□□□□ -1.45
RTTN-219ENST00000640525 GJB2P29033 226 aa6.02□□□□□ -1.45
RTTN-219ENST00000640525 SLC16A2P36021 539 aa6.02□□□□□ -1.45
RTTN-219ENST00000640525 IREB2P48200 963 aaKnown RBP6.02□□□□□ -1.45
RTTN-219ENST00000640525 NOVP48745 357 aa6.02□□□□□ -1.45
RTTN-219ENST00000640525 KLRC3Q07444 240 aa6.02□□□□□ -1.45
RTTN-219ENST00000640525 SPP2Q13103 211 aa6.02□□□□□ -1.45
RTTN-219ENST00000640525 GRM4Q14833 912 aa6.02□□□□□ -1.45
RTTN-219ENST00000640525 SLFN13Q68D06 897 aa6.02□□□□□ -1.45
RTTN-219ENST00000640525 DESI1Q6ICB0 168 aa6.02□□□□□ -1.45
RTTN-219ENST00000640525 SRBD1Q8N5C6 995 aaKnown RBP6.02□□□□□ -1.45
RTTN-219ENST00000640525 NSUN7Q8NE18 718 aaKnown RBP6.02□□□□□ -1.45
RTTN-219ENST00000640525 CTCFLQ8NI51 663 aaPredicted RBP6.02□□□□□ -1.45
RTTN-219ENST00000640525 AIFM3Q96NN9 605 aa6.02□□□□□ -1.45
RTTN-219ENST00000640525 FEZ1Q99689 392 aa6.02□□□□□ -1.45
RTTN-219ENST00000640525 ARHGEF10LQ9HCE6 1279 aa6.02□□□□□ -1.45
RTTN-219ENST00000640525 SMC3Q9UQE7 1217 aa6.02□□□□□ -1.45
RTTN-219ENST00000640525 ATAD5Q96QE3 1844 aa6.02□□□□□ -1.45
RTTN-219ENST00000640525 RGS20O76081 388 aa6.02□□□□□ -1.45
RTTN-219ENST00000640525 DDAH1O94760 285 aa6.02□□□□□ -1.45
RTTN-219ENST00000640525 NDUFB10O96000 172 aa6.02□□□□□ -1.45
RTTN-219ENST00000640525 PDHBP11177 359 aa6.02□□□□□ -1.45
RTTN-219ENST00000640525 CTHP32929 405 aa6.02□□□□□ -1.45
RTTN-219ENST00000640525 SNAP25P60880 206 aa6.02□□□□□ -1.45
RTTN-219ENST00000640525 SLC35G1Q2M3R5 365 aa6.02□□□□□ -1.45
RTTN-219ENST00000640525 CST9Q5W186 159 aa6.02□□□□□ -1.45
RTTN-219ENST00000640525 ARMC9Q7Z3E5 817 aa6.02□□□□□ -1.45
RTTN-219ENST00000640525 MKL1Q969V6 931 aa6.02□□□□□ -1.45
RTTN-219ENST00000640525 SLC26A6Q9BXS9 759 aa6.02□□□□□ -1.45
RTTN-219ENST00000640525 GJB4Q9NTQ9 266 aa6.02□□□□□ -1.45
RTTN-219ENST00000640525 EVA1BQ9NVM1 165 aa6.02□□□□□ -1.45
RTTN-219ENST00000640525 MAD2L2Q9UI95 211 aa6.02□□□□□ -1.45
RTTN-219ENST00000640525 CSADQ9Y600 493 aa6.02□□□□□ -1.45
RTTN-219ENST00000640525 MYH4Q9Y623 1939 aa6.01□□□□□ -1.45
RTTN-219ENST00000640525 KLRF2D3W0D1 207 aa6.01□□□□□ -1.45
RTTN-219ENST00000640525 DHX16O60231 1041 aaKnown RBP6.01□□□□□ -1.45
RTTN-219ENST00000640525 PARP1P09874 1014 aaKnown RBP6.01□□□□□ -1.45
RTTN-219ENST00000640525 CALM1P0DP23 149 aa6.01□□□□□ -1.45
RTTN-219ENST00000640525 CALM2P0DP24 149 aa6.01□□□□□ -1.45
RTTN-219ENST00000640525 CALM3P0DP25 149 aa6.01□□□□□ -1.45
RTTN-219ENST00000640525 FDPSP14324 419 aaKnown RBP6.01□□□□□ -1.45
RTTN-219ENST00000640525 NT5C2P49902 561 aa6.01□□□□□ -1.45
RTTN-219ENST00000640525 GUCY1B3Q02153 619 aa6.01□□□□□ -1.45
RTTN-219ENST00000640525 PKP1Q13835 747 aa6.01□□□□□ -1.45
RTTN-219ENST00000640525 NTRK3Q16288 839 aa6.01□□□□□ -1.45
RTTN-219ENST00000640525 FAM83BQ5T0W9 1011 aa6.01□□□□□ -1.45
RTTN-219ENST00000640525 OTUD7BQ6GQQ9 843 aa6.01□□□□□ -1.45
RTTN-219ENST00000640525 ANKRD13AQ8IZ07 590 aa6.01□□□□□ -1.45
RTTN-219ENST00000640525 GBA2Q9HCG7 927 aaPredicted RBP6.01□□□□□ -1.45
RTTN-219ENST00000640525 TMX2Q9Y320 296 aa6.01□□□□□ -1.45
RTTN-219ENST00000640525 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.01□□□□□ -1.45
RTTN-219ENST00000640525 V9GY48 417 aaPredicted RBP6.01□□□□□ -1.45
RTTN-219ENST00000640525 DOCK1Q14185 1865 aa6.01□□□□□ -1.45
RTTN-219ENST00000640525 OTOFQ9HC10 1997 aa6.01□□□□□ -1.45
RTTN-219ENST00000640525 PALM3A6NDB9 673 aaPredicted RBP6.01□□□□□ -1.45
RTTN-219ENST00000640525 USP17L10C9JJH3 530 aa6.01□□□□□ -1.45
RTTN-219ENST00000640525 TMEM232C9JQI7 657 aa6.01□□□□□ -1.45
RTTN-219ENST00000640525 CYTH3O43739 400 aa6.01□□□□□ -1.45
RTTN-219ENST00000640525 TAL1P17542 331 aaPredicted RBP6.01□□□□□ -1.45
RTTN-219ENST00000640525 SLC1A4P43007 532 aa6.01□□□□□ -1.45
RTTN-219ENST00000640525 HMGCS2P54868 508 aa6.01□□□□□ -1.45
RTTN-219ENST00000640525 SSRP1Q08945 709 aaKnown RBP6.01□□□□□ -1.45
RTTN-219ENST00000640525 ZNF543Q08ER8 600 aa6.01□□□□□ -1.45
RTTN-219ENST00000640525 IKQ13123 557 aaPredicted RBP6.01□□□□□ -1.45
RTTN-219ENST00000640525 NOL9Q5SY16 702 aaKnown RBP6.01□□□□□ -1.45
RTTN-219ENST00000640525 TMTC3Q6ZXV5 915 aa6.01□□□□□ -1.45
RTTN-219ENST00000640525 HOMER1Q86YM7 354 aa6.01□□□□□ -1.45
RTTN-219ENST00000640525 C2orf69Q8N8R5 385 aa6.01□□□□□ -1.45
RTTN-219ENST00000640525 FAM184AQ8NB25 1140 aa6.01□□□□□ -1.45
RTTN-219ENST00000640525 ZNF784Q8NCA9 323 aaPredicted RBP6.01□□□□□ -1.45
RTTN-219ENST00000640525 ZNF280CQ8ND82 737 aa6.01□□□□□ -1.45
RTTN-219ENST00000640525 BANK1Q8NDB2 785 aa6.01□□□□□ -1.45
RTTN-219ENST00000640525 SMARCC2Q8TAQ2 1214 aa6.01□□□□□ -1.45
RTTN-219ENST00000640525 VCPKMTQ9H867 229 aa6.01□□□□□ -1.45
RTTN-219ENST00000640525 FBXO28Q9NVF7 368 aa6.01□□□□□ -1.45
RTTN-219ENST00000640525 ORC3Q9UBD5 711 aaPredicted RBP6.01□□□□□ -1.45
RTTN-219ENST00000640525 CCNYL3P0C7X3 344 aa6□□□□□ -1.45
RTTN-219ENST00000640525 SNHG28P0DPA3 235 aa6□□□□□ -1.45
RTTN-219ENST00000640525 BMP3P12645 472 aa6□□□□□ -1.45
RTTN-219ENST00000640525 IFNAR1P17181 557 aa6□□□□□ -1.45
RTTN-219ENST00000640525 KIF5BP33176 963 aa6□□□□□ -1.45
RTTN-219ENST00000640525 PTPRNQ16849 979 aa6□□□□□ -1.45
RTTN-219ENST00000640525 LDLRAD1Q5T700 205 aa6□□□□□ -1.45
RTTN-219ENST00000640525 CPLX2Q6PUV4 134 aaKnown RBP6□□□□□ -1.45
RTTN-219ENST00000640525 GMCL1P1Q8NEA9 526 aa6□□□□□ -1.45
RTTN-219ENST00000640525 GPKOWQ92917 476 aaPredicted RBP eCLIP6□□□□□ -1.45
RTTN-219ENST00000640525 OPTNQ96CV9 577 aa6□□□□□ -1.45
RTTN-219ENST00000640525 SLC10A4Q96EP9 437 aa6□□□□□ -1.45
RTTN-219ENST00000640525 INTS4Q96HW7 963 aaKnown RBP6□□□□□ -1.45
RTTN-219ENST00000640525 PIGSQ96S52 555 aa6□□□□□ -1.45
RTTN-219ENST00000640525 OCSTAMPQ9BR26 566 aa6□□□□□ -1.45
RTTN-219ENST00000640525 AS3MTQ9HBK9 375 aa6□□□□□ -1.45
RTTN-219ENST00000640525 RBM28Q9NW13 759 aaKnown RBP6□□□□□ -1.45
RTTN-219ENST00000640525 AFG3L2Q9Y4W6 797 aa6□□□□□ -1.45
RTTN-219ENST00000640525 CNTNAP5Q8WYK1 1306 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms