RNA–Protein interactions for RNA: ENST00000640440.1

HNRNPU-229, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 3

Gene HNRNPU, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-229ENST00000640440 KRT23Q9C075 422 aa16.9■□□□□ 0.3
HNRNPU-229ENST00000640440 RNF216Q9NWF9 866 aaPredicted RBP16.9■□□□□ 0.3
HNRNPU-229ENST00000640440 CYP39A1Q9NYL5 469 aa16.9■□□□□ 0.3
HNRNPU-229ENST00000640440 PRKAG2Q9UGJ0 569 aa16.9■□□□□ 0.3
HNRNPU-229ENST00000640440 DDX49Q9Y6V7 483 aaKnown RBP16.9■□□□□ 0.3
HNRNPU-229ENST00000640440 ASTN1O14525 1302 aa16.9■□□□□ 0.3
HNRNPU-229ENST00000640440 A0A1W2PQ45 241 aaPredicted RBP16.89■□□□□ 0.29
HNRNPU-229ENST00000640440 A0A1W2PQY0 241 aa16.89■□□□□ 0.29
HNRNPU-229ENST00000640440 MYADML2A6NDP7 307 aa16.89■□□□□ 0.29
HNRNPU-229ENST00000640440 ASB14A6NK59 587 aa16.89■□□□□ 0.29
HNRNPU-229ENST00000640440 SOX1O00570 391 aaPredicted RBP16.89■□□□□ 0.29
HNRNPU-229ENST00000640440 GOLGA8HP0CJ92 632 aa16.89■□□□□ 0.29
HNRNPU-229ENST00000640440 CHMLP26374 656 aa16.89■□□□□ 0.29
HNRNPU-229ENST00000640440 ENAHQ8N8S7 591 aaPredicted RBP16.89■□□□□ 0.29
HNRNPU-229ENST00000640440 PNMA1Q8ND90 353 aa16.89■□□□□ 0.29
HNRNPU-229ENST00000640440 PURBQ96QR8 312 aaKnown RBP16.89■□□□□ 0.29
HNRNPU-229ENST00000640440 LBHD1Q9BQE6 289 aaPredicted RBP16.89■□□□□ 0.29
HNRNPU-229ENST00000640440 KATNBL1Q9H079 304 aa16.89■□□□□ 0.29
HNRNPU-229ENST00000640440 CPVLQ9H3G5 476 aa16.89■□□□□ 0.29
HNRNPU-229ENST00000640440 KAT14Q9H8E8 782 aa16.89■□□□□ 0.29
HNRNPU-229ENST00000640440 CNNM2Q9H8M5 875 aa16.89■□□□□ 0.29
HNRNPU-229ENST00000640440 PRDM5Q9NQX1 630 aaPredicted RBP16.89■□□□□ 0.29
HNRNPU-229ENST00000640440 ZSWIM5Q9P217 1185 aa16.89■□□□□ 0.29
HNRNPU-229ENST00000640440 TNKSO95271 1327 aa16.89■□□□□ 0.29
HNRNPU-229ENST00000640440 NFIBO00712 420 aa16.88■□□□□ 0.29
HNRNPU-229ENST00000640440 C6orf222P0C671 652 aaPredicted RBP16.88■□□□□ 0.29
HNRNPU-229ENST00000640440 HOXD11P31277 338 aaPredicted RBP16.88■□□□□ 0.29
HNRNPU-229ENST00000640440 BAATQ14032 418 aaPredicted RBP16.88■□□□□ 0.29
HNRNPU-229ENST00000640440 GPATCH4Q5T3I0 446 aaKnown RBP16.88■□□□□ 0.29
HNRNPU-229ENST00000640440 TDHQ8IZJ6 230 aa16.88■□□□□ 0.29
HNRNPU-229ENST00000640440 KLHDC9Q8NEP7 349 aa16.88■□□□□ 0.29
HNRNPU-229ENST00000640440 ANKS1AQ92625 1134 aa16.88■□□□□ 0.29
HNRNPU-229ENST00000640440 UBAC1Q9BSL1 405 aa16.88■□□□□ 0.29
HNRNPU-229ENST00000640440 TSEN34Q9BSV6 310 aaKnown RBP16.88■□□□□ 0.29
HNRNPU-229ENST00000640440 LAMA2P24043 3122 aaKnown RBP16.87■□□□□ 0.29
HNRNPU-229ENST00000640440 PTPDC1A2A3K4 754 aa16.87■□□□□ 0.29
HNRNPU-229ENST00000640440 ACLYP53396 1101 aa16.87■□□□□ 0.29
HNRNPU-229ENST00000640440 IRX5P78411 483 aaPredicted RBP16.87■□□□□ 0.29
HNRNPU-229ENST00000640440 PTH1RQ03431 593 aa16.87■□□□□ 0.29
HNRNPU-229ENST00000640440 KCNA10Q16322 511 aa16.87■□□□□ 0.29
HNRNPU-229ENST00000640440 C1orf53Q5VUE5 145 aa16.87■□□□□ 0.29
HNRNPU-229ENST00000640440 NOL8Q76FK4 1167 aaKnown RBP16.87■□□□□ 0.29
HNRNPU-229ENST00000640440 EEPD1Q7L9B9 569 aa16.87■□□□□ 0.29
HNRNPU-229ENST00000640440 FBXO16Q8IX29 292 aaPredicted RBP16.87■□□□□ 0.29
HNRNPU-229ENST00000640440 LRCH3Q96II8 777 aa16.87■□□□□ 0.29
HNRNPU-229ENST00000640440 UBA5Q9GZZ9 404 aa16.87■□□□□ 0.29
HNRNPU-229ENST00000640440 SPC25Q9HBM1 224 aa16.87■□□□□ 0.29
HNRNPU-229ENST00000640440 PDLIM7Q9NR12 457 aa16.87■□□□□ 0.29
HNRNPU-229ENST00000640440 WDR19Q8NEZ3 1342 aa16.87■□□□□ 0.29
HNRNPU-229ENST00000640440 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.86■□□□□ 0.29
HNRNPU-229ENST00000640440 MOXD2PA6NHM9 499 aa16.86■□□□□ 0.29
HNRNPU-229ENST00000640440 PQBP1O60828 265 aaKnown RBP16.86■□□□□ 0.29
HNRNPU-229ENST00000640440 CST5P28325 142 aaPredicted RBP16.86■□□□□ 0.29
HNRNPU-229ENST00000640440 TLE2Q04725 743 aa16.86■□□□□ 0.29
HNRNPU-229ENST00000640440 CCSAPQ6IQ19 270 aaPredicted RBP16.86■□□□□ 0.29
HNRNPU-229ENST00000640440 SLC30A10Q6XR72 485 aa16.86■□□□□ 0.29
HNRNPU-229ENST00000640440 CLEC4DQ8WXI8 215 aa16.86■□□□□ 0.29
HNRNPU-229ENST00000640440 UPF3AQ9H1J1 476 aaKnown RBP16.86■□□□□ 0.29
HNRNPU-229ENST00000640440 STARD7Q9NQZ5 370 aa16.86■□□□□ 0.29
HNRNPU-229ENST00000640440 PNMA2Q9UL42 364 aa16.86■□□□□ 0.29
HNRNPU-229ENST00000640440 MYO9BQ13459 2157 aa16.86■□□□□ 0.29
HNRNPU-229ENST00000640440 KIAA1217Q5T5P2 1943 aa16.86■□□□□ 0.29
HNRNPU-229ENST00000640440 SGSM2O43147 1006 aa16.85■□□□□ 0.29
HNRNPU-229ENST00000640440 PARP1P09874 1014 aaKnown RBP16.85■□□□□ 0.29
HNRNPU-229ENST00000640440 CALML3P27482 149 aa16.85■□□□□ 0.29
HNRNPU-229ENST00000640440 GJA9P57773 515 aa16.85■□□□□ 0.29
HNRNPU-229ENST00000640440 TNFAIP2Q03169 654 aa16.85■□□□□ 0.29
HNRNPU-229ENST00000640440 CDC37Q16543 378 aaPredicted RBP16.85■□□□□ 0.29
HNRNPU-229ENST00000640440 USH1GQ495M9 461 aa16.85■□□□□ 0.29
HNRNPU-229ENST00000640440 ASPRV1Q53RT3 343 aa16.85■□□□□ 0.29
HNRNPU-229ENST00000640440 IFIT1BQ5T764 474 aaKnown RBP16.85■□□□□ 0.29
HNRNPU-229ENST00000640440 SH3RF1Q7Z6J0 888 aa16.85■□□□□ 0.29
HNRNPU-229ENST00000640440 NUP133Q8WUM0 1156 aa16.85■□□□□ 0.29
HNRNPU-229ENST00000640440 U3KPZ7 1027 aaPredicted RBP16.85■□□□□ 0.29
HNRNPU-229ENST00000640440 TRIM43BA6NCK2 446 aa16.84■□□□□ 0.29
HNRNPU-229ENST00000640440 CYP21A2P08686 494 aa16.84■□□□□ 0.29
HNRNPU-229ENST00000640440 CLTBP09497 229 aa16.84■□□□□ 0.29
HNRNPU-229ENST00000640440 PTGS1P23219 599 aa16.84■□□□□ 0.29
HNRNPU-229ENST00000640440 ALDH5A1P51649 535 aaPredicted RBP16.84■□□□□ 0.29
HNRNPU-229ENST00000640440 TRDNQ13061 729 aa16.84■□□□□ 0.29
HNRNPU-229ENST00000640440 GNASQ5JWF2 1037 aa16.84■□□□□ 0.29
HNRNPU-229ENST00000640440 RNF207Q6ZRF8 634 aa16.84■□□□□ 0.29
HNRNPU-229ENST00000640440 CYB5R4Q7L1T6 521 aa16.84■□□□□ 0.29
HNRNPU-229ENST00000640440 PCSK9Q8NBP7 692 aaKnown RBP16.84■□□□□ 0.29
HNRNPU-229ENST00000640440 TRIM43Q96BQ3 446 aaPredicted RBP16.84■□□□□ 0.29
HNRNPU-229ENST00000640440 VTA1Q9NP79 307 aa16.84■□□□□ 0.29
HNRNPU-229ENST00000640440 PDGFCQ9NRA1 345 aa16.84■□□□□ 0.29
HNRNPU-229ENST00000640440 ADD3Q9UEY8 706 aaKnown RBP16.84■□□□□ 0.29
HNRNPU-229ENST00000640440 CTAGE5O15320 804 aa16.83■□□□□ 0.28
HNRNPU-229ENST00000640440 DHX16O60231 1041 aaKnown RBP16.83■□□□□ 0.28
HNRNPU-229ENST00000640440 ASGR1P07306 291 aa16.83■□□□□ 0.28
HNRNPU-229ENST00000640440 SMPD1P17405 629 aa16.83■□□□□ 0.28
HNRNPU-229ENST00000640440 RPS6P62753 249 aaKnown RBP16.83■□□□□ 0.28
HNRNPU-229ENST00000640440 BEX3Q00994 111 aa16.83■□□□□ 0.28
HNRNPU-229ENST00000640440 SEC23AQ15436 765 aa16.83■□□□□ 0.28
HNRNPU-229ENST00000640440 LRIT3Q3SXY7 679 aa16.83■□□□□ 0.28
HNRNPU-229ENST00000640440 TAPT1Q6NXT6 567 aa16.83■□□□□ 0.28
HNRNPU-229ENST00000640440 TLK2Q86UE8 772 aa16.83■□□□□ 0.28
HNRNPU-229ENST00000640440 ADGRF4Q8IZF3 695 aa16.83■□□□□ 0.28
HNRNPU-229ENST00000640440 MORC4Q8TE76 937 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms