RNA–Protein interactions for RNA: ENST00000639876.1

TRIO-225, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 5 BASIC

Gene TRIO, Length 769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-225ENST00000639876 ICAM1P05362 532 aa11.07□□□□□ -0.64
TRIO-225ENST00000639876 RAG1P15918 1043 aa11.07□□□□□ -0.64
TRIO-225ENST00000639876 SMAD3P84022 425 aaKnown RBP11.07□□□□□ -0.64
TRIO-225ENST00000639876 MDM2Q00987 491 aaPredicted RBP11.07□□□□□ -0.64
TRIO-225ENST00000639876 CCDC96Q2M329 555 aa11.07□□□□□ -0.64
TRIO-225ENST00000639876 TRIM60Q495X7 471 aa11.07□□□□□ -0.64
TRIO-225ENST00000639876 ZNF697Q5TEC3 545 aa11.07□□□□□ -0.64
TRIO-225ENST00000639876 MFSD6Q6ZSS7 791 aa11.07□□□□□ -0.64
TRIO-225ENST00000639876 ARMCX2Q7L311 632 aa11.07□□□□□ -0.64
TRIO-225ENST00000639876 SMC5Q8IY18 1101 aa11.07□□□□□ -0.64
TRIO-225ENST00000639876 NUP88Q99567 741 aaPredicted RBP11.07□□□□□ -0.64
TRIO-225ENST00000639876 UPF3AQ9H1J1 476 aaKnown RBP11.07□□□□□ -0.64
TRIO-225ENST00000639876 OSBPL3Q9H4L5 887 aa11.07□□□□□ -0.64
TRIO-225ENST00000639876 RAVER2Q9HCJ3 691 aaKnown RBP11.07□□□□□ -0.64
TRIO-225ENST00000639876 VTA1Q9NP79 307 aa11.07□□□□□ -0.64
TRIO-225ENST00000639876 PDLIM7Q9NR12 457 aa11.07□□□□□ -0.64
TRIO-225ENST00000639876 RNF146Q9NTX7 359 aa11.07□□□□□ -0.64
TRIO-225ENST00000639876 CTNNA3Q9UI47 895 aa11.07□□□□□ -0.64
TRIO-225ENST00000639876 WDR19Q8NEZ3 1342 aa11.07□□□□□ -0.64
TRIO-225ENST00000639876 NKRFO15226 690 aaKnown RBP eCLIP11.06□□□□□ -0.64
TRIO-225ENST00000639876 CHGBP05060 677 aa11.06□□□□□ -0.64
TRIO-225ENST00000639876 C6orf222P0C671 652 aaPredicted RBP11.06□□□□□ -0.64
TRIO-225ENST00000639876 ACLYP53396 1101 aa11.06□□□□□ -0.64
TRIO-225ENST00000639876 GJA9P57773 515 aa11.06□□□□□ -0.64
TRIO-225ENST00000639876 PPIGQ13427 754 aaKnown RBP eCLIP11.06□□□□□ -0.642e-7■■□□□ 14.5
TRIO-225ENST00000639876 PDAP1Q13442 181 aaKnown RBP11.06□□□□□ -0.64
TRIO-225ENST00000639876 BTNL9Q6UXG8 535 aa11.06□□□□□ -0.64
TRIO-225ENST00000639876 STK11IPQ8N1F8 1099 aa11.06□□□□□ -0.64
TRIO-225ENST00000639876 FAM133AQ8N9E0 248 aa11.06□□□□□ -0.64
TRIO-225ENST00000639876 KLHDC9Q8NEP7 349 aa11.06□□□□□ -0.64
TRIO-225ENST00000639876 TRERF1Q96PN7 1200 aa11.06□□□□□ -0.64
TRIO-225ENST00000639876 AP5M1Q9H0R1 490 aa11.06□□□□□ -0.64
TRIO-225ENST00000639876 CNNM2Q9H8M5 875 aa11.06□□□□□ -0.64
TRIO-225ENST00000639876 DIAPH3Q9NSV4 1193 aa11.06□□□□□ -0.64
TRIO-225ENST00000639876 CCPG1Q9ULG6 757 aa11.06□□□□□ -0.64
TRIO-225ENST00000639876 ZNF213O14771 459 aa11.05□□□□□ -0.64
TRIO-225ENST00000639876 PGK1P00558 417 aa11.05□□□□□ -0.64
TRIO-225ENST00000639876 HSPD1P10809 573 aaKnown RBP11.05□□□□□ -0.64
TRIO-225ENST00000639876 MCCP23508 829 aa11.05□□□□□ -0.64
TRIO-225ENST00000639876 FPGSQ05932 587 aa11.05□□□□□ -0.64
TRIO-225ENST00000639876 AKNAD1Q5T1N1 836 aa11.05□□□□□ -0.64
TRIO-225ENST00000639876 IQSEC1Q6DN90 963 aa11.05□□□□□ -0.64
TRIO-225ENST00000639876 CHD1LQ86WJ1 897 aa11.05□□□□□ -0.64
TRIO-225ENST00000639876 DGKHQ86XP1 1220 aa11.05□□□□□ -0.64
TRIO-225ENST00000639876 DNERQ8NFT8 737 aa11.05□□□□□ -0.64
TRIO-225ENST00000639876 CRBNQ96SW2 442 aa11.05□□□□□ -0.64
TRIO-225ENST00000639876 SEC62Q99442 399 aaKnown RBP11.05□□□□□ -0.64
TRIO-225ENST00000639876 RANBP17Q9H2T7 1088 aaKnown RBP11.05□□□□□ -0.64
TRIO-225ENST00000639876 A1CFQ9NQ94 594 aaKnown RBP11.05□□□□□ -0.64
TRIO-225ENST00000639876 TMEM39AQ9NV64 488 aa11.05□□□□□ -0.64
TRIO-225ENST00000639876 PRR12Q9ULL5 1215 aa11.05□□□□□ -0.64
TRIO-225ENST00000639876 KPNA6O60684 536 aa11.04□□□□□ -0.64
TRIO-225ENST00000639876 SNAI1O95863 264 aaPredicted RBP11.04□□□□□ -0.64
TRIO-225ENST00000639876 FGAP02671 866 aa11.04□□□□□ -0.64
TRIO-225ENST00000639876 ALAS1P13196 640 aa11.04□□□□□ -0.64
TRIO-225ENST00000639876 SLC4A3P48751 1232 aa11.04□□□□□ -0.64
TRIO-225ENST00000639876 CPT1AP50416 773 aa11.04□□□□□ -0.64
TRIO-225ENST00000639876 TNFAIP2Q03169 654 aa11.04□□□□□ -0.64
TRIO-225ENST00000639876 TLE2Q04725 743 aa11.04□□□□□ -0.64
TRIO-225ENST00000639876 IMMTQ16891 758 aaKnown RBP11.04□□□□□ -0.64
TRIO-225ENST00000639876 CCDC144BQ3MJ40 725 aa11.04□□□□□ -0.64
TRIO-225ENST00000639876 GNASQ5JWF2 1037 aa11.04□□□□□ -0.64
TRIO-225ENST00000639876 PRAMEF19Q5SWL8 479 aa11.04□□□□□ -0.64
TRIO-225ENST00000639876 SYDE2Q5VT97 1194 aa11.04□□□□□ -0.64
TRIO-225ENST00000639876 ANO1Q5XXA6 986 aa11.04□□□□□ -0.64
TRIO-225ENST00000639876 PSRC1Q6PGN9 363 aaPredicted RBP11.04□□□□□ -0.64
TRIO-225ENST00000639876 CCDC144CPQ8IYA2 1237 aa11.04□□□□□ -0.64
TRIO-225ENST00000639876 TMEM199Q8N511 208 aa11.04□□□□□ -0.64
TRIO-225ENST00000639876 PDCD7Q8N8D1 485 aaKnown RBP11.04□□□□□ -0.64
TRIO-225ENST00000639876 SLC17A8Q8NDX2 589 aa11.04□□□□□ -0.64
TRIO-225ENST00000639876 RUFY2Q8WXA3 655 aa11.04□□□□□ -0.64
TRIO-225ENST00000639876 LRCH3Q96II8 777 aa11.04□□□□□ -0.64
TRIO-225ENST00000639876 DSCC1Q9BVC3 393 aa11.04□□□□□ -0.64
TRIO-225ENST00000639876 KRT23Q9C075 422 aa11.04□□□□□ -0.64
TRIO-225ENST00000639876 HOMER2Q9NSB8 354 aa11.04□□□□□ -0.64
TRIO-225ENST00000639876 POLR3EQ9NVU0 708 aa11.04□□□□□ -0.64
TRIO-225ENST00000639876 RIPK3Q9Y572 518 aa11.04□□□□□ -0.64
TRIO-225ENST00000639876 LAMA4Q16363 1823 aa11.03□□□□□ -0.64
TRIO-225ENST00000639876 SMIM22K7EJ46 135 aa11.03□□□□□ -0.64
TRIO-225ENST00000639876 SOX1O00570 391 aaPredicted RBP11.03□□□□□ -0.64
TRIO-225ENST00000639876 PQBP1O60828 265 aaKnown RBP11.03□□□□□ -0.64
TRIO-225ENST00000639876 ASGR1P07306 291 aa11.03□□□□□ -0.64
TRIO-225ENST00000639876 SUPT20HL2P0C7V6 817 aa11.03□□□□□ -0.64
TRIO-225ENST00000639876 KCNA10Q16322 511 aa11.03□□□□□ -0.64
TRIO-225ENST00000639876 ASPRV1Q53RT3 343 aa11.03□□□□□ -0.64
TRIO-225ENST00000639876 RRP12Q5JTH9 1297 aaKnown RBP11.03□□□□□ -0.64
TRIO-225ENST00000639876 NOL8Q76FK4 1167 aaKnown RBP11.03□□□□□ -0.64
TRIO-225ENST00000639876 TLK2Q86UE8 772 aa11.03□□□□□ -0.64
TRIO-225ENST00000639876 SAMD3Q8N6K7 520 aa11.03□□□□□ -0.64
TRIO-225ENST00000639876 RGS22Q8NE09 1264 aa11.03□□□□□ -0.64
TRIO-225ENST00000639876 MORC4Q8TE76 937 aa11.03□□□□□ -0.64
TRIO-225ENST00000639876 RILPL2Q969X0 211 aa11.03□□□□□ -0.64
TRIO-225ENST00000639876 FERMT2Q96AC1 680 aa11.03□□□□□ -0.64
TRIO-225ENST00000639876 VTI1AQ96AJ9 217 aa11.03□□□□□ -0.64
TRIO-225ENST00000639876 RNPC3Q96LT9 517 aaKnown RBP11.03□□□□□ -0.64
TRIO-225ENST00000639876 LNPKQ9C0E8 428 aa11.03□□□□□ -0.64
TRIO-225ENST00000639876 MTMR10Q9NXD2 777 aa11.03□□□□□ -0.64
TRIO-225ENST00000639876 CYP39A1Q9NYL5 469 aa11.03□□□□□ -0.64
TRIO-225ENST00000639876 ARVCFO00192 962 aa11.02□□□□□ -0.65
TRIO-225ENST00000639876 TIMP1P01033 207 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms