RNA–Protein interactions for RNA: ENST00000637709.2

SCN8A-214, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 2,489 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-214ENST00000637709 KRT25Q7Z3Z0 450 aa17.34■□□□□ 0.37
SCN8A-214ENST00000637709 TXLNAP40222 546 aa17.33■□□□□ 0.37
SCN8A-214ENST00000637709 CCT6AP40227 531 aaKnown RBP17.33■□□□□ 0.37
SCN8A-214ENST00000637709 SF3B2Q13435 895 aaKnown RBP17.33■□□□□ 0.37
SCN8A-214ENST00000637709 ABCB5Q2M3G0 1257 aa17.33■□□□□ 0.37
SCN8A-214ENST00000637709 IDI2Q9BXS1 227 aa17.33■□□□□ 0.37
SCN8A-214ENST00000637709 GREB1LQ9C091 1923 aaPredicted RBP17.33■□□□□ 0.37
SCN8A-214ENST00000637709 A0A1W2PRG0 241 aa17.33■□□□□ 0.36
SCN8A-214ENST00000637709 SFPQP23246 707 aaKnown RBP eCLIP17.33■□□□□ 0.36
SCN8A-214ENST00000637709 ADKP55263 362 aaKnown RBP17.33■□□□□ 0.36
SCN8A-214ENST00000637709 QRICH1Q2TAL8 776 aa17.33■□□□□ 0.36
SCN8A-214ENST00000637709 TMEM39BQ9GZU3 492 aa17.33■□□□□ 0.36
SCN8A-214ENST00000637709 PNMA6FA0A0J9YX94 578 aa17.32■□□□□ 0.36
SCN8A-214ENST00000637709 RPN1P04843 607 aaKnown RBP17.32■□□□□ 0.36
SCN8A-214ENST00000637709 CABP7Q86V35 215 aa17.32■□□□□ 0.36
SCN8A-214ENST00000637709 NUDT12Q9BQG2 462 aa17.32■□□□□ 0.36
SCN8A-214ENST00000637709 F5H6K3 240 aa17.32■□□□□ 0.36
SCN8A-214ENST00000637709 ZNF18P17022 549 aa17.32■□□□□ 0.36
SCN8A-214ENST00000637709 KLRC3Q07444 240 aa17.32■□□□□ 0.36
SCN8A-214ENST00000637709 GALNT17Q6IS24 598 aa17.32■□□□□ 0.36
SCN8A-214ENST00000637709 ENOX1Q8TC92 643 aaKnown RBP17.32■□□□□ 0.36
SCN8A-214ENST00000637709 CPLX3Q8WVH0 158 aa17.32■□□□□ 0.36
SCN8A-214ENST00000637709 ARID3AQ99856 593 aa17.32■□□□□ 0.36
SCN8A-214ENST00000637709 DHX36Q9H2U1 1008 aaKnown RBP17.32■□□□□ 0.36
SCN8A-214ENST00000637709 ZBTB5O15062 677 aa17.31■□□□□ 0.36
SCN8A-214ENST00000637709 CDC37Q16543 378 aaPredicted RBP17.31■□□□□ 0.36
SCN8A-214ENST00000637709 KIAA1755Q5JYT7 1200 aa17.31■□□□□ 0.36
SCN8A-214ENST00000637709 RBM26Q5T8P6 1007 aaKnown RBP17.31■□□□□ 0.36
SCN8A-214ENST00000637709 ELOA2Q8IYF1 753 aaPredicted RBP17.31■□□□□ 0.36
SCN8A-214ENST00000637709 GSDMAQ96QA5 445 aa17.31■□□□□ 0.36
SCN8A-214ENST00000637709 EHD4Q9H223 541 aa17.31■□□□□ 0.36
SCN8A-214ENST00000637709 PCDHA1Q9Y5I3 950 aa17.31■□□□□ 0.36
SCN8A-214ENST00000637709 TNNT1P13805 278 aa17.31■□□□□ 0.36
SCN8A-214ENST00000637709 PRCPP42785 496 aa17.31■□□□□ 0.36
SCN8A-214ENST00000637709 NT5C2P49902 561 aa17.31■□□□□ 0.36
SCN8A-214ENST00000637709 PMS1P54277 932 aaKnown RBP17.31■□□□□ 0.36
SCN8A-214ENST00000637709 CALCRLQ16602 461 aa17.31■□□□□ 0.36
SCN8A-214ENST00000637709 CCDC93Q567U6 631 aa17.31■□□□□ 0.36
SCN8A-214ENST00000637709 VSTM4Q8IW00 320 aa17.31■□□□□ 0.36
SCN8A-214ENST00000637709 TRIML1Q8N9V2 468 aa17.31■□□□□ 0.36
SCN8A-214ENST00000637709 ACER1Q8TDN7 264 aa17.31■□□□□ 0.36
SCN8A-214ENST00000637709 PSTPIP2Q9H939 334 aa17.31■□□□□ 0.36
SCN8A-214ENST00000637709 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.31■□□□□ 0.36
SCN8A-214ENST00000637709 NDUFB10O96000 172 aa17.3■□□□□ 0.36
SCN8A-214ENST00000637709 RSBN1LQ6PCB5 846 aaPredicted RBP17.3■□□□□ 0.36
SCN8A-214ENST00000637709 CCDC34Q96HJ3 373 aa17.3■□□□□ 0.36
SCN8A-214ENST00000637709 P2RX7Q99572 595 aaKnown RBP17.3■□□□□ 0.36
SCN8A-214ENST00000637709 MMTAG2Q9BU76 263 aaKnown RBP17.3■□□□□ 0.36
SCN8A-214ENST00000637709 KANSL2Q9H9L4 492 aa17.3■□□□□ 0.36
SCN8A-214ENST00000637709 DACH1Q9UI36 760 aa17.3■□□□□ 0.36
SCN8A-214ENST00000637709 SPDYE2BA6NHP3 402 aa17.3■□□□□ 0.36
SCN8A-214ENST00000637709 GTPBP6O43824 516 aaPredicted RBP17.3■□□□□ 0.36
SCN8A-214ENST00000637709 EGFRP00533 1210 aa17.3■□□□□ 0.36
SCN8A-214ENST00000637709 SPDYE6P0CI01 402 aa17.3■□□□□ 0.36
SCN8A-214ENST00000637709 BAG6P46379 1132 aa17.3■□□□□ 0.36
SCN8A-214ENST00000637709 NBPF9Q3BBW0 867 aa17.3■□□□□ 0.36
SCN8A-214ENST00000637709 TATDN1Q6P1N9 297 aa17.3■□□□□ 0.36
SCN8A-214ENST00000637709 ZFP91Q96JP5 570 aaPredicted RBP17.3■□□□□ 0.36
SCN8A-214ENST00000637709 DLGAP5Q15398 846 aa17.29■□□□□ 0.36
SCN8A-214ENST00000637709 KMT5BQ4FZB7 885 aa17.29■□□□□ 0.36
SCN8A-214ENST00000637709 CEP135Q66GS9 1140 aa17.29■□□□□ 0.36
SCN8A-214ENST00000637709 E4F1Q66K89 784 aaPredicted RBP17.29■□□□□ 0.36
SCN8A-214ENST00000637709 CC2D2BQ6DHV5 1058 aa17.29■□□□□ 0.36
SCN8A-214ENST00000637709 SLC30A10Q6XR72 485 aa17.29■□□□□ 0.36
SCN8A-214ENST00000637709 NELFBQ8WX92 580 aa17.29■□□□□ 0.36
SCN8A-214ENST00000637709 MORC2Q9Y6X9 1032 aaPredicted RBP17.29■□□□□ 0.36
SCN8A-214ENST00000637709 RGPD3A6NKT7 1758 aaPredicted RBP17.29■□□□□ 0.36
SCN8A-214ENST00000637709 RGPD4Q7Z3J3 1758 aa17.29■□□□□ 0.36
SCN8A-214ENST00000637709 RIOK3O14730 519 aaKnown RBP17.29■□□□□ 0.36
SCN8A-214ENST00000637709 ERCC3P19447 782 aa17.29■□□□□ 0.36
SCN8A-214ENST00000637709 HOXA13P31271 388 aaPredicted RBP17.29■□□□□ 0.36
SCN8A-214ENST00000637709 CCDC17Q96LX7 622 aa17.29■□□□□ 0.36
SCN8A-214ENST00000637709 GLIS2Q9BZE0 524 aaPredicted RBP17.29■□□□□ 0.36
SCN8A-214ENST00000637709 VPS16Q9H269 839 aa17.29■□□□□ 0.36
SCN8A-214ENST00000637709 ARFGEF1Q9Y6D6 1849 aa17.29■□□□□ 0.36
SCN8A-214ENST00000637709 C10orf71Q711Q0 1435 aa17.28■□□□□ 0.36
SCN8A-214ENST00000637709 FCER1AP12319 257 aa17.28■□□□□ 0.36
SCN8A-214ENST00000637709 GPATCH4Q5T3I0 446 aaKnown RBP17.28■□□□□ 0.36
SCN8A-214ENST00000637709 DYMQ7RTS9 669 aa17.28■□□□□ 0.36
SCN8A-214ENST00000637709 CUL5Q93034 780 aa17.28■□□□□ 0.36
SCN8A-214ENST00000637709 TMX1Q9H3N1 280 aa17.28■□□□□ 0.36
SCN8A-214ENST00000637709 RIC8AQ9NPQ8 531 aa17.28■□□□□ 0.36
SCN8A-214ENST00000637709 ZNF70Q9UC06 446 aaPredicted RBP17.28■□□□□ 0.36
SCN8A-214ENST00000637709 GSDMDP57764 484 aa17.28■□□□□ 0.36
SCN8A-214ENST00000637709 HDLBPQ00341 1268 aaKnown RBP17.28■□□□□ 0.36
SCN8A-214ENST00000637709 DGKZQ13574 1117 aa17.28■□□□□ 0.36
SCN8A-214ENST00000637709 ECM1Q16610 540 aa17.28■□□□□ 0.36
SCN8A-214ENST00000637709 SPATA1Q5VX52 437 aa17.28■□□□□ 0.36
SCN8A-214ENST00000637709 TMEM179Q6ZVK1 233 aa17.28■□□□□ 0.36
SCN8A-214ENST00000637709 OGFOD1Q8N543 542 aa17.28■□□□□ 0.36
SCN8A-214ENST00000637709 IMPACTQ9P2X3 320 aa17.28■□□□□ 0.36
SCN8A-214ENST00000637709 CBFA2T2O43439 604 aa17.27■□□□□ 0.36
SCN8A-214ENST00000637709 SMARCA1P28370 1054 aa17.27■□□□□ 0.36
SCN8A-214ENST00000637709 APTXQ7Z2E3 356 aaKnown RBP17.27■□□□□ 0.36
SCN8A-214ENST00000637709 KCNK18Q7Z418 384 aa17.27■□□□□ 0.36
SCN8A-214ENST00000637709 CCAR2Q8N163 923 aaKnown RBP17.27■□□□□ 0.36
SCN8A-214ENST00000637709 LRWD1Q9UFC0 647 aa17.27■□□□□ 0.36
SCN8A-214ENST00000637709 DDX25Q9UHL0 483 aaKnown RBP17.27■□□□□ 0.36
SCN8A-214ENST00000637709 MYO3BQ8WXR4 1341 aa17.27■□□□□ 0.36
SCN8A-214ENST00000637709 NKRFO15226 690 aaKnown RBP eCLIP17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms