RNA–Protein interactions for RNA: ENST00000636999.1

CACNA1D-220, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 5

Gene CACNA1D, Length 4,212 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-220ENST00000636999 ETF1P62495 437 aaKnown RBP8.58□□□□□ -1.04
CACNA1D-220ENST00000636999 ZFYVE27Q5T4F4 411 aa8.58□□□□□ -1.04
CACNA1D-220ENST00000636999 ARHGEF16Q5VV41 709 aa8.58□□□□□ -1.04
CACNA1D-220ENST00000636999 NCAPH2Q6IBW4 605 aa8.58□□□□□ -1.04
CACNA1D-220ENST00000636999 CNKSR2Q8WXI2 1034 aa8.58□□□□□ -1.04
CACNA1D-220ENST00000636999 TAF4BQ92750 862 aa8.58□□□□□ -1.04
CACNA1D-220ENST00000636999 MXD3Q9BW11 206 aa8.58□□□□□ -1.04
CACNA1D-220ENST00000636999 DNAI2Q9GZS0 605 aa8.58□□□□□ -1.04
CACNA1D-220ENST00000636999 NT5C3AQ9H0P0 336 aa8.58□□□□□ -1.04
CACNA1D-220ENST00000636999 BLZF1Q9H2G9 400 aa8.58□□□□□ -1.04
CACNA1D-220ENST00000636999 SYNRGQ9UMZ2 1314 aa8.58□□□□□ -1.04
CACNA1D-220ENST00000636999 BICDL2A1A5D9 508 aa8.57□□□□□ -1.04
CACNA1D-220ENST00000636999 GMPSP49915 693 aaPredicted RBP8.57□□□□□ -1.04
CACNA1D-220ENST00000636999 CCDC144BQ3MJ40 725 aa8.57□□□□□ -1.04
CACNA1D-220ENST00000636999 SPECC1LQ69YQ0 1117 aa8.57□□□□□ -1.04
CACNA1D-220ENST00000636999 CNGA4Q8IV77 575 aa8.57□□□□□ -1.04
CACNA1D-220ENST00000636999 FAM151AQ8WW52 585 aa8.57□□□□□ -1.04
CACNA1D-220ENST00000636999 VTI1AQ96AJ9 217 aa8.57□□□□□ -1.04
CACNA1D-220ENST00000636999 VPS33BQ9H267 617 aa8.57□□□□□ -1.04
CACNA1D-220ENST00000636999 PCDHA12Q9UN75 941 aa8.57□□□□□ -1.04
CACNA1D-220ENST00000636999 DNM3Q9UQ16 869 aa8.57□□□□□ -1.04
CACNA1D-220ENST00000636999 LUC7L2Q9Y383 392 aaKnown RBP8.57□□□□□ -1.04
CACNA1D-220ENST00000636999 PNMA6FA0A0J9YX94 578 aa8.57□□□□□ -1.04
CACNA1D-220ENST00000636999 MMP1P03956 469 aa8.57□□□□□ -1.04
CACNA1D-220ENST00000636999 ATP1A3P13637 1013 aa8.57□□□□□ -1.04
CACNA1D-220ENST00000636999 CYLC1P35663 651 aaPredicted RBP8.57□□□□□ -1.04
CACNA1D-220ENST00000636999 NAA30Q147X3 362 aaPredicted RBP8.57□□□□□ -1.04
CACNA1D-220ENST00000636999 CEP112Q8N8E3 955 aa8.57□□□□□ -1.04
CACNA1D-220ENST00000636999 MMRN2Q9H8L6 949 aa8.57□□□□□ -1.04
CACNA1D-220ENST00000636999 TAB2Q9NYJ8 693 aa8.57□□□□□ -1.04
CACNA1D-220ENST00000636999 ZNF70Q9UC06 446 aaPredicted RBP8.57□□□□□ -1.04
CACNA1D-220ENST00000636999 CACNA1FO60840 1977 aa8.57□□□□□ -1.04
CACNA1D-220ENST00000636999 GOLGA6L10A6NI86 522 aa8.57□□□□□ -1.04
CACNA1D-220ENST00000636999 OR52Z1P0C646 297 aa8.57□□□□□ -1.04
CACNA1D-220ENST00000636999 EEF2P13639 858 aaKnown RBP8.57□□□□□ -1.04
CACNA1D-220ENST00000636999 CDR1P51861 262 aa8.57□□□□□ -1.04
CACNA1D-220ENST00000636999 CABP7Q86V35 215 aa8.57□□□□□ -1.04
CACNA1D-220ENST00000636999 NCAPG2Q86XI2 1143 aa8.57□□□□□ -1.04
CACNA1D-220ENST00000636999 SLFN12Q8IYM2 578 aa8.57□□□□□ -1.04
CACNA1D-220ENST00000636999 C2orf69Q8N8R5 385 aa8.57□□□□□ -1.04
CACNA1D-220ENST00000636999 DLG5Q8TDM6 1919 aa8.56□□□□□ -1.04
CACNA1D-220ENST00000636999 ARHGEF35A5YM69 484 aa8.56□□□□□ -1.04
CACNA1D-220ENST00000636999 USP17L10C9JJH3 530 aa8.56□□□□□ -1.04
CACNA1D-220ENST00000636999 IBSPP21815 317 aaPredicted RBP8.56□□□□□ -1.04
CACNA1D-220ENST00000636999 EXOSC10Q01780 885 aaKnown RBP8.56□□□□□ -1.04
CACNA1D-220ENST00000636999 PRR16Q569H4 304 aa8.56□□□□□ -1.04
CACNA1D-220ENST00000636999 VPS36Q86VN1 386 aa8.56□□□□□ -1.04
CACNA1D-220ENST00000636999 GPIHBP1Q8IV16 184 aa8.56□□□□□ -1.04
CACNA1D-220ENST00000636999 VGLL2Q8N8G2 317 aa8.56□□□□□ -1.04
CACNA1D-220ENST00000636999 ZHX2Q9Y6X8 837 aa8.56□□□□□ -1.04
CACNA1D-220ENST00000636999 FAM205AQ6ZU69 1335 aa8.56□□□□□ -1.04
CACNA1D-220ENST00000636999 TESPA1A2RU30 521 aaPredicted RBP8.56□□□□□ -1.04
CACNA1D-220ENST00000636999 F5H6K3 240 aa8.56□□□□□ -1.04
CACNA1D-220ENST00000636999 NMT2O60551 498 aa8.56□□□□□ -1.04
CACNA1D-220ENST00000636999 PLEKHA8P1O95397 391 aa8.56□□□□□ -1.04
CACNA1D-220ENST00000636999 AKR1B1P15121 316 aa8.56□□□□□ -1.04
CACNA1D-220ENST00000636999 GCFC2P16383 781 aaKnown RBP8.56□□□□□ -1.04
CACNA1D-220ENST00000636999 KLRC3Q07444 240 aa8.56□□□□□ -1.04
CACNA1D-220ENST00000636999 NR5A1Q13285 461 aa8.56□□□□□ -1.04
CACNA1D-220ENST00000636999 KCTD2Q14681 263 aa8.56□□□□□ -1.04
CACNA1D-220ENST00000636999 CDC37Q16543 378 aaPredicted RBP8.56□□□□□ -1.04
CACNA1D-220ENST00000636999 GRAMD1CQ8IYS0 662 aa8.56□□□□□ -1.04
CACNA1D-220ENST00000636999 TIGD1Q96MW7 591 aa8.56□□□□□ -1.04
CACNA1D-220ENST00000636999 TCHPQ9BT92 498 aa8.56□□□□□ -1.04
CACNA1D-220ENST00000636999 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.56□□□□□ -1.04
CACNA1D-220ENST00000636999 MYOZ2Q9NPC6 264 aa8.56□□□□□ -1.04
CACNA1D-220ENST00000636999 STK36Q9NRP7 1315 aa8.56□□□□□ -1.04
CACNA1D-220ENST00000636999 LAD1O00515 517 aa8.56□□□□□ -1.04
CACNA1D-220ENST00000636999 COBLO75128 1261 aa8.56□□□□□ -1.04
CACNA1D-220ENST00000636999 POTEJP0CG39 1038 aa8.56□□□□□ -1.04
CACNA1D-220ENST00000636999 KRT13P13646 458 aa8.56□□□□□ -1.04
CACNA1D-220ENST00000636999 CDC25BP30305 580 aa8.56□□□□□ -1.04
CACNA1D-220ENST00000636999 KRT9P35527 623 aa8.56□□□□□ -1.04
CACNA1D-220ENST00000636999 PTGDRQ13258 359 aa8.56□□□□□ -1.04
CACNA1D-220ENST00000636999 RCSD1Q6JBY9 416 aa8.56□□□□□ -1.04
CACNA1D-220ENST00000636999 COA7Q96BR5 231 aa8.56□□□□□ -1.04
CACNA1D-220ENST00000636999 KCNF1Q9H3M0 494 aa8.56□□□□□ -1.04
CACNA1D-220ENST00000636999 AZI2Q9H6S1 392 aa8.56□□□□□ -1.04
CACNA1D-220ENST00000636999 EPB41L4AQ9HCS5 686 aaPredicted RBP8.56□□□□□ -1.04
CACNA1D-220ENST00000636999 NCBP1Q09161 790 aaKnown RBP8.56□□□□□ -1.04
CACNA1D-220ENST00000636999 SPP2Q13103 211 aa8.56□□□□□ -1.04
CACNA1D-220ENST00000636999 PPP1R13BQ96KQ4 1090 aa8.56□□□□□ -1.04
CACNA1D-220ENST00000636999 ZDHHC15Q96MV8 337 aa8.56□□□□□ -1.04
CACNA1D-220ENST00000636999 SH3GLB2Q9NR46 395 aa8.56□□□□□ -1.04
CACNA1D-220ENST00000636999 DDX25Q9UHL0 483 aaKnown RBP8.56□□□□□ -1.04
CACNA1D-220ENST00000636999 SALL1Q9NSC2 1324 aa8.55□□□□□ -1.04
CACNA1D-220ENST00000636999 KDM3AQ9Y4C1 1321 aa8.55□□□□□ -1.04
CACNA1D-220ENST00000636999 DDX39AO00148 427 aaKnown RBP8.55□□□□□ -1.04
CACNA1D-220ENST00000636999 ERCC3P19447 782 aa8.55□□□□□ -1.04
CACNA1D-220ENST00000636999 MCM3P25205 808 aa8.55□□□□□ -1.04
CACNA1D-220ENST00000636999 CRY2Q49AN0 593 aa8.55□□□□□ -1.04
CACNA1D-220ENST00000636999 CNNM4Q6P4Q7 775 aa8.55□□□□□ -1.04
CACNA1D-220ENST00000636999 C16orf86Q6ZW13 317 aa8.55□□□□□ -1.04
CACNA1D-220ENST00000636999 PLA2G4DQ86XP0 818 aa8.55□□□□□ -1.04
CACNA1D-220ENST00000636999 CCDC42Q96M95 316 aa8.55□□□□□ -1.04
CACNA1D-220ENST00000636999 VPS18Q9P253 973 aa8.55□□□□□ -1.04
CACNA1D-220ENST00000636999 ADD3Q9UEY8 706 aaKnown RBP8.55□□□□□ -1.04
CACNA1D-220ENST00000636999 HACL1Q9UJ83 578 aa8.55□□□□□ -1.04
CACNA1D-220ENST00000636999 PNMA3Q9UL41 463 aa8.55□□□□□ -1.04
CACNA1D-220ENST00000636999 PPP2R2CQ9Y2T4 447 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms