RNA–Protein interactions for RNA: ENST00000636840.1

PNKP-226, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 117 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-226ENST00000636840 MAML3Q96JK9 1138 aa9.53□□□□□ -0.88
PNKP-226ENST00000636840 TCEANC2Q96MN5 208 aa9.53□□□□□ -0.88
PNKP-226ENST00000636840 SPZ1Q9BXG8 430 aa9.53□□□□□ -0.88
PNKP-226ENST00000636840 RIOX1Q9H6W3 641 aa9.53□□□□□ -0.88
PNKP-226ENST00000636840 SENP2Q9HC62 589 aa9.53□□□□□ -0.88
PNKP-226ENST00000636840 GPHNQ9NQX3 736 aaPredicted RBP9.53□□□□□ -0.88
PNKP-226ENST00000636840 PDRG1Q9NUG6 133 aa9.53□□□□□ -0.88
PNKP-226ENST00000636840 MAP3K20Q9NYL2 800 aaKnown RBP9.53□□□□□ -0.88
PNKP-226ENST00000636840 ADD3Q9UEY8 706 aaKnown RBP9.53□□□□□ -0.88
PNKP-226ENST00000636840 NRBP1Q9UHY1 535 aa9.53□□□□□ -0.88
PNKP-226ENST00000636840 CNPY2Q9Y2B0 182 aa9.53□□□□□ -0.88
PNKP-226ENST00000636840 PCDHA1Q9Y5I3 950 aa9.53□□□□□ -0.88
PNKP-226ENST00000636840 ZNF536O15090 1300 aa9.53□□□□□ -0.88
PNKP-226ENST00000636840 PTPDC1A2A3K4 754 aa9.52□□□□□ -0.89
PNKP-226ENST00000636840 GOLGA8AA7E2F4 631 aa9.52□□□□□ -0.89
PNKP-226ENST00000636840 GOLGA8BA8MQT2 603 aa9.52□□□□□ -0.89
PNKP-226ENST00000636840 MSCO60682 206 aa9.52□□□□□ -0.89
PNKP-226ENST00000636840 COBLO75128 1261 aa9.52□□□□□ -0.89
PNKP-226ENST00000636840 PGK2P07205 417 aa9.52□□□□□ -0.89
PNKP-226ENST00000636840 GJB1P08034 283 aa9.52□□□□□ -0.89
PNKP-226ENST00000636840 PRKAR2AP13861 404 aaKnown RBP9.52□□□□□ -0.89
PNKP-226ENST00000636840 METAP2P50579 478 aaKnown RBP eCLIP9.52□□□□□ -0.89
PNKP-226ENST00000636840 AKAP17AQ02040 695 aaKnown RBP9.52□□□□□ -0.89
PNKP-226ENST00000636840 ZNF792Q3KQV3 632 aa9.52□□□□□ -0.89
PNKP-226ENST00000636840 RNF207Q6ZRF8 634 aa9.52□□□□□ -0.89
PNKP-226ENST00000636840 ZNF467Q7Z7K2 595 aaPredicted RBP9.52□□□□□ -0.89
PNKP-226ENST00000636840 MICU3Q86XE3 530 aa9.52□□□□□ -0.89
PNKP-226ENST00000636840 CCDC144CPQ8IYA2 1237 aa9.52□□□□□ -0.89
PNKP-226ENST00000636840 IL27Q8NEV9 243 aa9.52□□□□□ -0.89
PNKP-226ENST00000636840 TRIB2Q92519 343 aa9.52□□□□□ -0.89
PNKP-226ENST00000636840 TINF2Q9BSI4 451 aa9.52□□□□□ -0.89
PNKP-226ENST00000636840 MYL10Q9BUA6 226 aa9.52□□□□□ -0.89
PNKP-226ENST00000636840 CPVLQ9H3G5 476 aa9.52□□□□□ -0.89
PNKP-226ENST00000636840 CYP39A1Q9NYL5 469 aa9.52□□□□□ -0.89
PNKP-226ENST00000636840 RLFQ13129 1914 aa9.52□□□□□ -0.89
PNKP-226ENST00000636840 KIAA0100Q14667 2235 aaKnown RBP9.51□□□□□ -0.89
PNKP-226ENST00000636840 DNAJC25-GNG10A0A024R161 153 aa9.51□□□□□ -0.89
PNKP-226ENST00000636840 LOC102724159A0A0B4J2E5 919 aa9.51□□□□□ -0.89
PNKP-226ENST00000636840 CPA1P15085 419 aa9.51□□□□□ -0.89
PNKP-226ENST00000636840 CACNB2Q08289 660 aaPredicted RBP9.51□□□□□ -0.89
PNKP-226ENST00000636840 APOBRQ0VD83 1088 aa9.51□□□□□ -0.89
PNKP-226ENST00000636840 BAATQ14032 418 aaPredicted RBP9.51□□□□□ -0.89
PNKP-226ENST00000636840 PWP2Q15269 919 aaKnown RBP9.51□□□□□ -0.89
PNKP-226ENST00000636840 MTFR1Q15390 333 aa9.51□□□□□ -0.89
PNKP-226ENST00000636840 CCL14Q16627 93 aa9.51□□□□□ -0.89
PNKP-226ENST00000636840 MUM1L1Q5H9M0 696 aa9.51□□□□□ -0.89
PNKP-226ENST00000636840 CCDC82Q8N4S0 544 aa9.51□□□□□ -0.89
PNKP-226ENST00000636840 PIBF1Q8WXW3 757 aa9.51□□□□□ -0.89
PNKP-226ENST00000636840 CUL5Q93034 780 aa9.51□□□□□ -0.89
PNKP-226ENST00000636840 MTMR8Q96EF0 704 aa9.51□□□□□ -0.89
PNKP-226ENST00000636840 ZNF274Q96GC6 653 aaPredicted RBP9.51□□□□□ -0.89
PNKP-226ENST00000636840 PIGSQ96S52 555 aa9.51□□□□□ -0.89
PNKP-226ENST00000636840 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.51□□□□□ -0.89
PNKP-226ENST00000636840 UNC93B1Q9H1C4 597 aa9.51□□□□□ -0.89
PNKP-226ENST00000636840 A1CFQ9NQ94 594 aaKnown RBP9.51□□□□□ -0.89
PNKP-226ENST00000636840 RBM27Q9P2N5 1060 aaKnown RBP9.51□□□□□ -0.89
PNKP-226ENST00000636840 ZNFX1Q9P2E3 1918 aaKnown RBP9.5□□□□□ -0.89
PNKP-226ENST00000636840 CPLX1O14810 134 aa9.5□□□□□ -0.89
PNKP-226ENST00000636840 SGPL1O95470 568 aa9.5□□□□□ -0.89
PNKP-226ENST00000636840 CFBP00751 764 aa9.5□□□□□ -0.89
PNKP-226ENST00000636840 RXRAP19793 462 aa9.5□□□□□ -0.89
PNKP-226ENST00000636840 CALML3P27482 149 aa9.5□□□□□ -0.89
PNKP-226ENST00000636840 CYP2C19P33261 490 aa9.5□□□□□ -0.89
PNKP-226ENST00000636840 NEK4P51957 841 aa9.5□□□□□ -0.89
PNKP-226ENST00000636840 SOX10P56693 466 aa9.5□□□□□ -0.89
PNKP-226ENST00000636840 C8orf34Q49A92 452 aa9.5□□□□□ -0.89
PNKP-226ENST00000636840 TMTC3Q6ZXV5 915 aa9.5□□□□□ -0.89
PNKP-226ENST00000636840 SRBD1Q8N5C6 995 aaKnown RBP9.5□□□□□ -0.89
PNKP-226ENST00000636840 FAM133AQ8N9E0 248 aa9.5□□□□□ -0.89
PNKP-226ENST00000636840 DNERQ8NFT8 737 aa9.5□□□□□ -0.89
PNKP-226ENST00000636840 DEFB118Q96PH6 123 aa9.5□□□□□ -0.89
PNKP-226ENST00000636840 AGXT2Q9BYV1 514 aa9.5□□□□□ -0.89
PNKP-226ENST00000636840 C22orf23Q9BZE7 217 aa9.5□□□□□ -0.89
PNKP-226ENST00000636840 UPF3BQ9BZI7 483 aaKnown RBP9.5□□□□□ -0.89
PNKP-226ENST00000636840 ALDH8A1Q9H2A2 487 aaPredicted RBP9.5□□□□□ -0.89
PNKP-226ENST00000636840 ABHD16BQ9H3Z7 469 aa9.5□□□□□ -0.89
PNKP-226ENST00000636840 BRPF3Q9ULD4 1205 aa9.5□□□□□ -0.89
PNKP-226ENST00000636840 FAM184BQ9ULE4 1060 aa9.5□□□□□ -0.89
PNKP-226ENST00000636840 SYNGAP1Q96PV0 1343 aa9.5□□□□□ -0.89
PNKP-226ENST00000636840 COL11A1P12107 1806 aaPredicted RBP9.49□□□□□ -0.89
PNKP-226ENST00000636840 BAZ2BQ9UIF8 2168 aaKnown RBP9.49□□□□□ -0.89
PNKP-226ENST00000636840 GCOM1H8Y6P7 765 aaPredicted RBP9.49□□□□□ -0.89
PNKP-226ENST00000636840 hCG_1984214I3L0E3 225 aa9.49□□□□□ -0.89
PNKP-226ENST00000636840 NFIBO00712 420 aa9.49□□□□□ -0.89
PNKP-226ENST00000636840 CYTH3O43739 400 aa9.49□□□□□ -0.89
PNKP-226ENST00000636840 SEC24BO95487 1268 aa9.49□□□□□ -0.89
PNKP-226ENST00000636840 POLR2MP0CAP2 368 aa9.49□□□□□ -0.89
PNKP-226ENST00000636840 PDIA3P30101 505 aaKnown RBP9.49□□□□□ -0.89
PNKP-226ENST00000636840 ADD1P35611 737 aaKnown RBP9.49□□□□□ -0.89
PNKP-226ENST00000636840 GJA8P48165 433 aa9.49□□□□□ -0.89
PNKP-226ENST00000636840 EVCP57679 992 aa9.49□□□□□ -0.89
PNKP-226ENST00000636840 RPS6P62753 249 aaKnown RBP9.49□□□□□ -0.89
PNKP-226ENST00000636840 CNTN2Q02246 1040 aa9.49□□□□□ -0.89
PNKP-226ENST00000636840 MAP3K21Q5TCX8 1036 aa9.49□□□□□ -0.89
PNKP-226ENST00000636840 MAMDC4Q6UXC1 1216 aa9.49□□□□□ -0.89
PNKP-226ENST00000636840 RAB11FIP4Q86YS3 637 aa9.49□□□□□ -0.89
PNKP-226ENST00000636840 TRIM22Q8IYM9 498 aa9.49□□□□□ -0.89
PNKP-226ENST00000636840 ZNF713Q8N859 430 aaPredicted RBP9.49□□□□□ -0.89
PNKP-226ENST00000636840 ARRDC4Q8NCT1 418 aa9.49□□□□□ -0.89
PNKP-226ENST00000636840 NSUN6Q8TEA1 469 aaKnown RBP9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms