RNA–Protein interactions for RNA: ENST00000636681.1

CLN5-213, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 5

Gene CLN5, Length 1,791 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-213ENST00000636681 SNRNP48Q6IEG0 339 aaKnown RBP12.27□□□□□ -0.45
CLN5-213ENST00000636681 USP17L6PQ6QN14 398 aa12.27□□□□□ -0.45
CLN5-213ENST00000636681 LBX2Q6XYB7 198 aa12.27□□□□□ -0.45
CLN5-213ENST00000636681 ANKRD23Q86SG2 305 aa12.27□□□□□ -0.45
CLN5-213ENST00000636681 IFNL1Q8IU54 200 aa12.27□□□□□ -0.45
CLN5-213ENST00000636681 DIS3L2Q8IYB7 885 aaKnown RBP12.27□□□□□ -0.45
CLN5-213ENST00000636681 CCDC102AQ96A19 550 aa12.27□□□□□ -0.45
CLN5-213ENST00000636681 AMNQ9BXJ7 453 aa12.27□□□□□ -0.45
CLN5-213ENST00000636681 RTN4Q9NQC3 1192 aaKnown RBP12.27□□□□□ -0.45
CLN5-213ENST00000636681 DDX49Q9Y6V7 483 aaKnown RBP12.27□□□□□ -0.45
CLN5-213ENST00000636681 MCM3APO60318 1980 aa12.27□□□□□ -0.45
CLN5-213ENST00000636681 PLXNB2O15031 1838 aa12.26□□□□□ -0.45
CLN5-213ENST00000636681 MANSC4A6NHS7 340 aaPredicted RBP12.26□□□□□ -0.45
CLN5-213ENST00000636681 ZBED4O75132 1171 aa12.26□□□□□ -0.45
CLN5-213ENST00000636681 ICAM1P05362 532 aa12.26□□□□□ -0.45
CLN5-213ENST00000636681 HOXA13P31271 388 aaPredicted RBP12.26□□□□□ -0.45
CLN5-213ENST00000636681 ANKRD13CQ8N6S4 541 aa12.26□□□□□ -0.45
CLN5-213ENST00000636681 CLEC4DQ8WXI8 215 aa12.26□□□□□ -0.45
CLN5-213ENST00000636681 WASF1Q92558 559 aa12.26□□□□□ -0.45
CLN5-213ENST00000636681 HHIPL1Q96JK4 782 aa12.26□□□□□ -0.45
CLN5-213ENST00000636681 FTOQ9C0B1 505 aaKnown RBP eCLIP12.26□□□□□ -0.45
CLN5-213ENST00000636681 HOXC10Q9NYD6 342 aa12.26□□□□□ -0.45
CLN5-213ENST00000636681 CHMP5Q9NZZ3 219 aa12.26□□□□□ -0.45
CLN5-213ENST00000636681 BIN2Q9UBW5 565 aaPredicted RBP12.26□□□□□ -0.45
CLN5-213ENST00000636681 WDR33Q9C0J8 1336 aaKnown RBP12.26□□□□□ -0.45
CLN5-213ENST00000636681 F13A1P00488 732 aa12.25□□□□□ -0.45
CLN5-213ENST00000636681 OSBPP22059 807 aa12.25□□□□□ -0.45
CLN5-213ENST00000636681 NBR1Q14596 966 aa12.25□□□□□ -0.45
CLN5-213ENST00000636681 JAKMIP3Q5VZ66 844 aa12.25□□□□□ -0.45
CLN5-213ENST00000636681 ZMYND12Q9H0C1 365 aa12.25□□□□□ -0.45
CLN5-213ENST00000636681 PORCNQ9H237 461 aa12.25□□□□□ -0.45
CLN5-213ENST00000636681 CPA4Q9UI42 421 aa12.25□□□□□ -0.45
CLN5-213ENST00000636681 CTDP1Q9Y5B0 961 aaPredicted RBP12.25□□□□□ -0.45
CLN5-213ENST00000636681 MGAMO43451 1857 aa12.25□□□□□ -0.45
CLN5-213ENST00000636681 M0R2N6 131 aa12.25□□□□□ -0.45
CLN5-213ENST00000636681 MEIS2O14770 477 aa12.25□□□□□ -0.45
CLN5-213ENST00000636681 PDCP20941 246 aa12.25□□□□□ -0.45
CLN5-213ENST00000636681 TRIM29Q14134 588 aa12.25□□□□□ -0.45
CLN5-213ENST00000636681 BLIDQ8IZY5 108 aa12.25□□□□□ -0.45
CLN5-213ENST00000636681 TNPO1Q92973 898 aaKnown RBP12.25□□□□□ -0.45
CLN5-213ENST00000636681 TNFRSF25Q93038 417 aa12.25□□□□□ -0.45
CLN5-213ENST00000636681 TRERF1Q96PN7 1200 aa12.25□□□□□ -0.45
CLN5-213ENST00000636681 MOV10L1Q9BXT6 1211 aaKnown RBP12.25□□□□□ -0.45
CLN5-213ENST00000636681 RNF146Q9NTX7 359 aa12.25□□□□□ -0.45
CLN5-213ENST00000636681 COL20A1Q9P218 1284 aa12.25□□□□□ -0.45
CLN5-213ENST00000636681 RBM27Q9P2N5 1060 aaKnown RBP12.25□□□□□ -0.45
CLN5-213ENST00000636681 PCDHA6Q9UN73 950 aa12.25□□□□□ -0.45
CLN5-213ENST00000636681 PCDHA8Q9Y5H6 950 aa12.25□□□□□ -0.45
CLN5-213ENST00000636681 PLXNA1Q9UIW2 1896 aa12.25□□□□□ -0.45
CLN5-213ENST00000636681 MYPNQ86TC9 1320 aa12.24□□□□□ -0.45
CLN5-213ENST00000636681 EDIL3O43854 480 aa12.24□□□□□ -0.45
CLN5-213ENST00000636681 CFBP00751 764 aa12.24□□□□□ -0.45
CLN5-213ENST00000636681 STAT3P40763 770 aa12.24□□□□□ -0.45
CLN5-213ENST00000636681 TAF1CQ15572 869 aaPredicted RBP12.24□□□□□ -0.45
CLN5-213ENST00000636681 SMCR8Q8TEV9 937 aaPredicted RBP12.24□□□□□ -0.45
CLN5-213ENST00000636681 ZFP91Q96JP5 570 aaPredicted RBP12.24□□□□□ -0.45
CLN5-213ENST00000636681 SPATC1LQ9H0A9 340 aa12.24□□□□□ -0.45
CLN5-213ENST00000636681 SH3GLB2Q9NR46 395 aa12.24□□□□□ -0.45
CLN5-213ENST00000636681 PCDHA4Q9UN74 947 aa12.24□□□□□ -0.45
CLN5-213ENST00000636681 KIF3AQ9Y496 699 aa12.24□□□□□ -0.45
CLN5-213ENST00000636681 ADGRA2Q96PE1 1338 aa12.23□□□□□ -0.45
CLN5-213ENST00000636681 KRT2P35908 639 aa12.23□□□□□ -0.45
CLN5-213ENST00000636681 TM4SF4P48230 202 aa12.23□□□□□ -0.45
CLN5-213ENST00000636681 ADCY7P51828 1080 aa12.23□□□□□ -0.45
CLN5-213ENST00000636681 C1QTNF8P60827 252 aa12.23□□□□□ -0.45
CLN5-213ENST00000636681 ERVK-9P63128 1117 aa12.23□□□□□ -0.45
CLN5-213ENST00000636681 ERVK-24P63145 666 aa12.23□□□□□ -0.45
CLN5-213ENST00000636681 UBXN2AP68543 259 aa12.23□□□□□ -0.45
CLN5-213ENST00000636681 PABPC4Q13310 644 aaKnown RBP eCLIP12.23□□□□□ -0.45
CLN5-213ENST00000636681 CRHR2Q13324 411 aa12.23□□□□□ -0.45
CLN5-213ENST00000636681 SLC30A10Q6XR72 485 aa12.23□□□□□ -0.45
CLN5-213ENST00000636681 PSTPIP2Q9H939 334 aa12.23□□□□□ -0.45
CLN5-213ENST00000636681 EFCC1Q9HA90 598 aa12.23□□□□□ -0.45
CLN5-213ENST00000636681 RIC8AQ9NPQ8 531 aa12.23□□□□□ -0.45
CLN5-213ENST00000636681 TFIP11Q9UBB9 837 aaKnown RBP12.23□□□□□ -0.45
CLN5-213ENST00000636681 CIZ1Q9ULV3 898 aaPredicted RBP12.23□□□□□ -0.45
CLN5-213ENST00000636681 HTTP42858 3142 aa12.23□□□□□ -0.45
CLN5-213ENST00000636681 KIAA1217Q5T5P2 1943 aa12.23□□□□□ -0.45
CLN5-213ENST00000636681 DOCK5Q9H7D0 1870 aa12.23□□□□□ -0.45
CLN5-213ENST00000636681 ATP2B1P20020 1258 aa12.23□□□□□ -0.45
CLN5-213ENST00000636681 U2AF2P26368 475 aaKnown RBP eCLIP12.23□□□□□ -0.45
CLN5-213ENST00000636681 TOB1P50616 345 aaPredicted RBP12.23□□□□□ -0.45
CLN5-213ENST00000636681 CAP1Q01518 475 aa12.23□□□□□ -0.45
CLN5-213ENST00000636681 NOGQ13253 232 aa12.23□□□□□ -0.45
CLN5-213ENST00000636681 NSMFQ6X4W1 530 aa12.23□□□□□ -0.45
CLN5-213ENST00000636681 PIK3AP1Q6ZUJ8 805 aa12.23□□□□□ -0.45
CLN5-213ENST00000636681 FCHSD1Q86WN1 690 aa12.23□□□□□ -0.45
CLN5-213ENST00000636681 NCAPG2Q86XI2 1143 aa12.23□□□□□ -0.45
CLN5-213ENST00000636681 CCDC148Q8NFR7 591 aa12.23□□□□□ -0.45
CLN5-213ENST00000636681 TEX13BQ9BXU2 312 aa12.23□□□□□ -0.45
CLN5-213ENST00000636681 GDPD2Q9HCC8 539 aa12.23□□□□□ -0.45
CLN5-213ENST00000636681 C6orf50Q9HD87 102 aa12.23□□□□□ -0.45
CLN5-213ENST00000636681 ABCB11O95342 1321 aa12.22□□□□□ -0.45
CLN5-213ENST00000636681 THSD7BQ9C0I4 1608 aa12.22□□□□□ -0.45
CLN5-213ENST00000636681 TBC1D8O95759 1140 aa12.22□□□□□ -0.45
CLN5-213ENST00000636681 XBP1P17861 261 aa12.22□□□□□ -0.45
CLN5-213ENST00000636681 ERCC3P19447 782 aa12.22□□□□□ -0.45
CLN5-213ENST00000636681 CLK2P49760 499 aaKnown RBP12.22□□□□□ -0.45
CLN5-213ENST00000636681 NUCB2P80303 420 aa12.22□□□□□ -0.45
CLN5-213ENST00000636681 CEBPZQ03701 1054 aaKnown RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms