RNA–Protein interactions for RNA: ENST00000636238.1

CIITA-214, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-214ENST00000636238 KIF28PB7ZC32 967 aa8.76□□□□□ -1.01
CIITA-214ENST00000636238 USP17L12C9JPN9 530 aa8.76□□□□□ -1.01
CIITA-214ENST00000636238 USP17L21D6R901 530 aa8.76□□□□□ -1.01
CIITA-214ENST00000636238 TLL1O43897 1013 aa8.76□□□□□ -1.01
CIITA-214ENST00000636238 BAIAP3O94812 1187 aa8.76□□□□□ -1.01
CIITA-214ENST00000636238 MFAP1P55081 439 aaKnown RBP8.76□□□□□ -1.01
CIITA-214ENST00000636238 FSCN1Q16658 493 aaKnown RBP8.76□□□□□ -1.01
CIITA-214ENST00000636238 SBK1Q52WX2 424 aa8.76□□□□□ -1.01
CIITA-214ENST00000636238 IQSEC1Q6DN90 963 aa8.76□□□□□ -1.01
CIITA-214ENST00000636238 ZSCAN25Q6NSZ9 544 aa8.76□□□□□ -1.01
CIITA-214ENST00000636238 FAM133AQ8N9E0 248 aa8.76□□□□□ -1.01
CIITA-214ENST00000636238 MKL1Q969V6 931 aa8.76□□□□□ -1.01
CIITA-214ENST00000636238 DYNLL2Q96FJ2 89 aa8.76□□□□□ -1.01
CIITA-214ENST00000636238 BOLA2Q9H3K6 86 aa8.76□□□□□ -1.01
CIITA-214ENST00000636238 GNEQ9Y223 722 aaKnown RBP8.76□□□□□ -1.01
CIITA-214ENST00000636238 TNKSO95271 1327 aa8.76□□□□□ -1.01
CIITA-214ENST00000636238 PRR33A8MZF0 331 aa8.75□□□□□ -1.01
CIITA-214ENST00000636238 F5H6K3 240 aa8.75□□□□□ -1.01
CIITA-214ENST00000636238 PI4K2BG5E9Z4 385 aa8.75□□□□□ -1.01
CIITA-214ENST00000636238 PITPNM1O00562 1244 aa8.75□□□□□ -1.01
CIITA-214ENST00000636238 KPNA6O60684 536 aa8.75□□□□□ -1.01
CIITA-214ENST00000636238 PLA2G6O60733 806 aa8.75□□□□□ -1.01
CIITA-214ENST00000636238 MBD4O95243 580 aa8.75□□□□□ -1.01
CIITA-214ENST00000636238 PARNO95453 639 aaKnown RBP8.75□□□□□ -1.01
CIITA-214ENST00000636238 CYP2D6P10635 497 aa8.75□□□□□ -1.01
CIITA-214ENST00000636238 ADD2P35612 726 aa8.75□□□□□ -1.01
CIITA-214ENST00000636238 PTPN11Q06124 597 aaPredicted RBP8.75□□□□□ -1.01
CIITA-214ENST00000636238 KLRC3Q07444 240 aa8.75□□□□□ -1.01
CIITA-214ENST00000636238 SKIV2LQ15477 1246 aaKnown RBP8.75□□□□□ -1.01
CIITA-214ENST00000636238 OTOP2Q7RTS6 562 aa8.75□□□□□ -1.01
CIITA-214ENST00000636238 TLK2Q86UE8 772 aa8.75□□□□□ -1.01
CIITA-214ENST00000636238 CCDC144CPQ8IYA2 1237 aa8.75□□□□□ -1.01
CIITA-214ENST00000636238 GMCL1P1Q8NEA9 526 aa8.75□□□□□ -1.01
CIITA-214ENST00000636238 FGD4Q96M96 766 aa8.75□□□□□ -1.01
CIITA-214ENST00000636238 AGBL1Q96MI9 1066 aa8.75□□□□□ -1.01
CIITA-214ENST00000636238 WNT8AQ9H1J5 351 aa8.75□□□□□ -1.01
CIITA-214ENST00000636238 ACAD9Q9H845 621 aa8.75□□□□□ -1.01
CIITA-214ENST00000636238 ARMT1Q9H993 441 aa8.75□□□□□ -1.01
CIITA-214ENST00000636238 VTA1Q9NP79 307 aa8.75□□□□□ -1.01
CIITA-214ENST00000636238 POLR3EQ9NVU0 708 aa8.75□□□□□ -1.01
CIITA-214ENST00000636238 RIPK3Q9Y572 518 aa8.75□□□□□ -1.01
CIITA-214ENST00000636238 CHD7Q9P2D1 2997 aa8.75□□□□□ -1.01
CIITA-214ENST00000636238 CDK5RAP2Q96SN8 1893 aa8.74□□□□□ -1.01
CIITA-214ENST00000636238 ZBBXA8MT70 800 aa8.74□□□□□ -1.01
CIITA-214ENST00000636238 GOLIM4O00461 696 aa8.74□□□□□ -1.01
CIITA-214ENST00000636238 ADCY6O43306 1168 aa8.74□□□□□ -1.01
CIITA-214ENST00000636238 NDUFB10O96000 172 aa8.74□□□□□ -1.01
CIITA-214ENST00000636238 ATP5JP18859 108 aa8.74□□□□□ -1.01
CIITA-214ENST00000636238 KCNQ1P51787 676 aa8.74□□□□□ -1.01
CIITA-214ENST00000636238 TFF2Q03403 129 aa8.74□□□□□ -1.01
CIITA-214ENST00000636238 LRRFIP1Q32MZ4 808 aaKnown RBP8.74□□□□□ -1.01
CIITA-214ENST00000636238 PUS10Q3MIT2 529 aaKnown RBP8.74□□□□□ -1.01
CIITA-214ENST00000636238 BRDTQ58F21 947 aaPredicted RBP8.74□□□□□ -1.01
CIITA-214ENST00000636238 SAMD1Q6SPF0 538 aaPredicted RBP8.74□□□□□ -1.01
CIITA-214ENST00000636238 CXCL17Q6UXB2 119 aa8.74□□□□□ -1.01
CIITA-214ENST00000636238 FAM160B2Q86V87 743 aa8.74□□□□□ -1.01
CIITA-214ENST00000636238 CLEC10AQ8IUN9 316 aa8.74□□□□□ -1.01
CIITA-214ENST00000636238 MORC4Q8TE76 937 aa8.74□□□□□ -1.01
CIITA-214ENST00000636238 NECAB3Q96P71 396 aaPredicted RBP8.74□□□□□ -1.01
CIITA-214ENST00000636238 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.74□□□□□ -1.01
CIITA-214ENST00000636238 ALDH8A1Q9H2A2 487 aaPredicted RBP8.74□□□□□ -1.01
CIITA-214ENST00000636238 PAG1Q9NWQ8 432 aa8.74□□□□□ -1.01
CIITA-214ENST00000636238 PNMA2Q9UL42 364 aa8.74□□□□□ -1.01
CIITA-214ENST00000636238 TRANK1O15050 2925 aa8.74□□□□□ -1.01
CIITA-214ENST00000636238 MUC6Q6W4X9 2439 aa8.74□□□□□ -1.01
CIITA-214ENST00000636238 MYH1P12882 1939 aa8.74□□□□□ -1.01
CIITA-214ENST00000636238 IGKV6D-41A0A0C4DH26 115 aa8.73□□□□□ -1.01
CIITA-214ENST00000636238 NKRFO15226 690 aaKnown RBP eCLIP8.73□□□□□ -1.01
CIITA-214ENST00000636238 B4GALT4O60513 344 aa8.73□□□□□ -1.01
CIITA-214ENST00000636238 EFCAB14O75071 495 aa8.73□□□□□ -1.01
CIITA-214ENST00000636238 CA3P07451 260 aa8.73□□□□□ -1.01
CIITA-214ENST00000636238 ALADP13716 330 aa8.73□□□□□ -1.01
CIITA-214ENST00000636238 CHMLP26374 656 aa8.73□□□□□ -1.01
CIITA-214ENST00000636238 CPT1AP50416 773 aa8.73□□□□□ -1.01
CIITA-214ENST00000636238 EVX2Q03828 476 aa8.73□□□□□ -1.01
CIITA-214ENST00000636238 BFSP2Q13515 415 aa8.73□□□□□ -1.01
CIITA-214ENST00000636238 NFRKBQ6P4R8 1299 aa8.73□□□□□ -1.01
CIITA-214ENST00000636238 CTR9Q6PD62 1173 aa8.73□□□□□ -1.01
CIITA-214ENST00000636238 NOL8Q76FK4 1167 aaKnown RBP8.73□□□□□ -1.01
CIITA-214ENST00000636238 MICALL1Q8N3F8 863 aa8.73□□□□□ -1.01
CIITA-214ENST00000636238 CHURC1Q8WUH1 139 aa8.73□□□□□ -1.01
CIITA-214ENST00000636238 GMCL1Q96IK5 515 aa8.73□□□□□ -1.01
CIITA-214ENST00000636238 DNAJC2Q99543 621 aaKnown RBP8.73□□□□□ -1.01
CIITA-214ENST00000636238 MAF1Q9H063 256 aa8.73□□□□□ -1.01
CIITA-214ENST00000636238 EPHX3Q9H6B9 360 aa8.73□□□□□ -1.01
CIITA-214ENST00000636238 MKNK2Q9HBH9 465 aa8.73□□□□□ -1.01
CIITA-214ENST00000636238 ASTN1O14525 1302 aa8.73□□□□□ -1.01
CIITA-214ENST00000636238 GRIN2DO15399 1336 aa8.73□□□□□ -1.01
CIITA-214ENST00000636238 RAD50Q92878 1312 aa8.73□□□□□ -1.01
CIITA-214ENST00000636238 XIRP2A4UGR9 3374 aa8.73□□□□□ -1.01
CIITA-214ENST00000636238 PLIN4Q96Q06 1357 aa8.73□□□□□ -1.01
CIITA-214ENST00000636238 DYNC1LI2O43237 492 aaPredicted RBP8.72□□□□□ -1.01
CIITA-214ENST00000636238 PRKAB2O43741 272 aa8.72□□□□□ -1.01
CIITA-214ENST00000636238 RAD21O60216 631 aa8.72□□□□□ -1.01
CIITA-214ENST00000636238 TTLL1O95922 423 aa8.72□□□□□ -1.01
CIITA-214ENST00000636238 SMPD1P17405 629 aa8.72□□□□□ -1.01
CIITA-214ENST00000636238 GNAT2P19087 354 aa8.72□□□□□ -1.01
CIITA-214ENST00000636238 RASA1P20936 1047 aa8.72□□□□□ -1.01
CIITA-214ENST00000636238 RABGGTBP53611 331 aa8.72□□□□□ -1.01
CIITA-214ENST00000636238 CCL23P55773 120 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms