RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, human

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCB1-208	ENST00000634926	DBH	P09172	617 aa		4.11	□□□□□ -1.75
SMARCB1-208	ENST00000634926	POLR2B	P30876	1174 aa	Known RBP	4.11	□□□□□ -1.75
SMARCB1-208	ENST00000634926	GDF5	P43026	501 aa		4.11	□□□□□ -1.75
SMARCB1-208	ENST00000634926	TMEM62	Q0P6H9	643 aa		4.11	□□□□□ -1.75
SMARCB1-208	ENST00000634926	ZNF761	Q86XN6	746 aa	Predicted RBP	4.11	□□□□□ -1.75
SMARCB1-208	ENST00000634926	PHACTR4	Q8IZ21	702 aa		4.11	□□□□□ -1.75
SMARCB1-208	ENST00000634926	ASCC2	Q9H1I8	757 aa	Predicted RBP	4.11	□□□□□ -1.75
SMARCB1-208	ENST00000634926	AP5S1	Q9NUS5	200 aa		4.11	□□□□□ -1.75
SMARCB1-208	ENST00000634926	RAD54L2	Q9Y4B4	1467 aa		4.11	□□□□□ -1.75
SMARCB1-208	ENST00000634926	SYNJ1	O43426	1573 aa		4.1	□□□□□ -1.75
SMARCB1-208	ENST00000634926	ADAMTS12	P58397	1594 aa		4.1	□□□□□ -1.75
SMARCB1-208	ENST00000634926		A0A1W2PQ45	241 aa	Predicted RBP	4.1	□□□□□ -1.75
SMARCB1-208	ENST00000634926		A0A1W2PQY0	241 aa		4.1	□□□□□ -1.75
SMARCB1-208	ENST00000634926	MEIS1	O00470	390 aa		4.1	□□□□□ -1.75
SMARCB1-208	ENST00000634926	RGS13	O14921	159 aa		4.1	□□□□□ -1.75
SMARCB1-208	ENST00000634926	SIGLEC6	O43699	453 aa		4.1	□□□□□ -1.75
SMARCB1-208	ENST00000634926	P4HB	P07237	508 aa	Known RBP	4.1	□□□□□ -1.75
SMARCB1-208	ENST00000634926	PRR5	P85299	388 aa		4.1	□□□□□ -1.75
SMARCB1-208	ENST00000634926	KLF10	Q13118	480 aa		4.1	□□□□□ -1.75
SMARCB1-208	ENST00000634926	RTP2	Q5QGT7	225 aa		4.1	□□□□□ -1.75
SMARCB1-208	ENST00000634926	LIMS2	Q7Z4I7	341 aa		4.1	□□□□□ -1.75
SMARCB1-208	ENST00000634926	TTC9B	Q8N6N2	239 aa		4.1	□□□□□ -1.75
SMARCB1-208	ENST00000634926	ZNF512B	Q96KM6	892 aa	Predicted RBP	4.1	□□□□□ -1.75
SMARCB1-208	ENST00000634926	ZNF747	Q9BV97	191 aa		4.1	□□□□□ -1.75
SMARCB1-208	ENST00000634926	PCED1A	Q9H1Q7	454 aa		4.1	□□□□□ -1.75
SMARCB1-208	ENST00000634926	SYNJ2	O15056	1496 aa		4.1	□□□□□ -1.75
SMARCB1-208	ENST00000634926	ABCA10	Q8WWZ4	1543 aa		4.1	□□□□□ -1.75
SMARCB1-208	ENST00000634926	BIVM-ERCC5	R4GMW8	1640 aa		4.1	□□□□□ -1.75
SMARCB1-208	ENST00000634926	CYR61	O00622	381 aa		4.09	□□□□□ -1.75
SMARCB1-208	ENST00000634926	ZNF205	O95201	554 aa		4.09	□□□□□ -1.75
SMARCB1-208	ENST00000634926	PLAT	P00750	562 aa		4.09	□□□□□ -1.75
SMARCB1-208	ENST00000634926	ASGR2	P07307	311 aa		4.09	□□□□□ -1.75
SMARCB1-208	ENST00000634926	GBP1	P32455	592 aa		4.09	□□□□□ -1.75
SMARCB1-208	ENST00000634926	GJA9	P57773	515 aa		4.09	□□□□□ -1.75
SMARCB1-208	ENST00000634926	TARBP2	Q15633	366 aa	Known RBP	4.09	□□□□□ -1.75
SMARCB1-208	ENST00000634926	FBXO27	Q8NI29	283 aa		4.09	□□□□□ -1.75
SMARCB1-208	ENST00000634926	DVL3	Q92997	716 aa	Predicted RBP	4.09	□□□□□ -1.75
SMARCB1-208	ENST00000634926	SYT3	Q9BQG1	590 aa		4.09	□□□□□ -1.75
SMARCB1-208	ENST00000634926	CDADC1	Q9BWV3	514 aa		4.09	□□□□□ -1.75
SMARCB1-208	ENST00000634926	RXFP1	Q9HBX9	757 aa		4.09	□□□□□ -1.75
SMARCB1-208	ENST00000634926	GRIN2B	Q13224	1484 aa		4.09	□□□□□ -1.75
SMARCB1-208	ENST00000634926	EIF4B	P23588	611 aa	Known RBP	4.08	□□□□□ -1.76
SMARCB1-208	ENST00000634926	NR1I3	Q14994	352 aa		4.08	□□□□□ -1.76
SMARCB1-208	ENST00000634926	ARSH	Q5FYA8	562 aa		4.08	□□□□□ -1.76
SMARCB1-208	ENST00000634926	CEP170	Q5SW79	1584 aa		4.08	□□□□□ -1.76
SMARCB1-208	ENST00000634926	CRTC3	Q6UUV7	619 aa		4.08	□□□□□ -1.76
SMARCB1-208	ENST00000634926	TOP2B	Q02880	1626 aa		4.07	□□□□□ -1.76
SMARCB1-208	ENST00000634926	ERCC6L2	Q5T890	1561 aa		4.07	□□□□□ -1.76
SMARCB1-208	ENST00000634926	SOGA1	O94964	1423 aa		4.07	□□□□□ -1.76
SMARCB1-208	ENST00000634926	NUP160	Q12769	1436 aa		4.07	□□□□□ -1.76
SMARCB1-208	ENST00000634926	PF4	P02776	101 aa		4.07	□□□□□ -1.76
SMARCB1-208	ENST00000634926	AMH	P03971	560 aa		4.07	□□□□□ -1.76
SMARCB1-208	ENST00000634926	CYBB	P04839	570 aa		4.07	□□□□□ -1.76
SMARCB1-208	ENST00000634926	VAV1	P15498	845 aa		4.07	□□□□□ -1.76
SMARCB1-208	ENST00000634926	ERCC3	P19447	782 aa		4.07	□□□□□ -1.76
SMARCB1-208	ENST00000634926	GNA15	P30679	374 aa		4.07	□□□□□ -1.76
SMARCB1-208	ENST00000634926	RBM25	P49756	843 aa	Known RBP	4.07	□□□□□ -1.76
SMARCB1-208	ENST00000634926	CAMK2G	Q13555	558 aa	Predicted RBP	4.07	□□□□□ -1.76
SMARCB1-208	ENST00000634926	PAQR3	Q6TCH7	311 aa		4.07	□□□□□ -1.76
SMARCB1-208	ENST00000634926	B3GNT8	Q7Z7M8	397 aa		4.07	□□□□□ -1.76
SMARCB1-208	ENST00000634926	GATAD2B	Q8WXI9	593 aa		4.07	□□□□□ -1.76
SMARCB1-208	ENST00000634926	ZNF428	Q96B54	188 aa		4.07	□□□□□ -1.76
SMARCB1-208	ENST00000634926	CHST7	Q9NS84	486 aa		4.07	□□□□□ -1.76
SMARCB1-208	ENST00000634926	GFOD1	Q9NXC2	390 aa		4.07	□□□□□ -1.76
SMARCB1-208	ENST00000634926	RUSC2	Q8N2Y8	1516 aa		4.06	□□□□□ -1.76
SMARCB1-208	ENST00000634926	TDRD9	Q8NDG6	1382 aa	Known RBP	4.06	□□□□□ -1.76
SMARCB1-208	ENST00000634926		E9PSI1	815 aa		4.06	□□□□□ -1.76
SMARCB1-208	ENST00000634926		F8W031	263 aa	Predicted RBP	4.06	□□□□□ -1.76
SMARCB1-208	ENST00000634926	SRGAP3	O43295	1099 aa		4.06	□□□□□ -1.76
SMARCB1-208	ENST00000634926	LDHB	P07195	334 aa	Known RBP	4.06	□□□□□ -1.76
SMARCB1-208	ENST00000634926	TACR1	P25103	407 aa		4.06	□□□□□ -1.76
SMARCB1-208	ENST00000634926	PML	P29590	882 aa		4.06	□□□□□ -1.76
SMARCB1-208	ENST00000634926	BMP8B	P34820	402 aa		4.06	□□□□□ -1.76
SMARCB1-208	ENST00000634926	SARS	P49591	514 aa	Known RBP	4.06	□□□□□ -1.76
SMARCB1-208	ENST00000634926	ICAM4	Q14773	271 aa		4.06	□□□□□ -1.76
SMARCB1-208	ENST00000634926	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	4.06	□□□□□ -1.76
SMARCB1-208	ENST00000634926	CCDC84	Q86UT8	332 aa	Predicted RBP	4.06	□□□□□ -1.76
SMARCB1-208	ENST00000634926	ADAMTS17	Q8TE56	1095 aa		4.06	□□□□□ -1.76
SMARCB1-208	ENST00000634926	ASB16	Q96NS5	453 aa		4.06	□□□□□ -1.76
SMARCB1-208	ENST00000634926	FBLN5	Q9UBX5	448 aa		4.06	□□□□□ -1.76
SMARCB1-208	ENST00000634926	INVS	Q9Y283	1065 aa		4.06	□□□□□ -1.76
SMARCB1-208	ENST00000634926	AK5	Q9Y6K8	562 aa		4.06	□□□□□ -1.76
SMARCB1-208	ENST00000634926	KIF13A	Q9H1H9	1805 aa		4.06	□□□□□ -1.76
SMARCB1-208	ENST00000634926	GRIN2A	Q12879	1464 aa		4.05	□□□□□ -1.76
SMARCB1-208	ENST00000634926	GAPVD1	Q14C86	1478 aa		4.05	□□□□□ -1.76
SMARCB1-208	ENST00000634926	RNF4	P78317	190 aa		4.05	□□□□□ -1.76
SMARCB1-208	ENST00000634926	ATP2B2	Q01814	1243 aa		4.05	□□□□□ -1.76
SMARCB1-208	ENST00000634926	LMNB2	Q03252	620 aa		4.05	□□□□□ -1.76
SMARCB1-208	ENST00000634926	SMARCC2	Q8TAQ2	1214 aa		4.05	□□□□□ -1.76
SMARCB1-208	ENST00000634926	EAF1	Q96JC9	268 aa	Predicted RBP	4.05	□□□□□ -1.76
SMARCB1-208	ENST00000634926	RNF38	Q9H0F5	515 aa		4.05	□□□□□ -1.76
SMARCB1-208	ENST00000634926	CD248	Q9HCU0	757 aa		4.05	□□□□□ -1.76
SMARCB1-208	ENST00000634926	TSC22D4	Q9Y3Q8	395 aa		4.05	□□□□□ -1.76
SMARCB1-208	ENST00000634926	HS3ST3A1	Q9Y663	406 aa		4.05	□□□□□ -1.76
SMARCB1-208	ENST00000634926	ERICH3	Q5RHP9	1530 aa		4.05	□□□□□ -1.76
SMARCB1-208	ENST00000634926	LTBP3	Q9NS15	1303 aa		4.04	□□□□□ -1.76
SMARCB1-208	ENST00000634926	FZD7	O75084	574 aa		4.04	□□□□□ -1.76
SMARCB1-208	ENST00000634926	BPNT1	O95861	308 aa		4.04	□□□□□ -1.76
SMARCB1-208	ENST00000634926	NCAM1	P13591	858 aa		4.04	□□□□□ -1.76
SMARCB1-208	ENST00000634926	HNRNPA0	Q13151	305 aa	Known RBP	4.04	□□□□□ -1.76

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