RNA–Protein interactions for RNA: ENST00000634889.1

CDC42BPB-209, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-209ENST00000634889 MUM1L1Q5H9M0 696 aa17.13■□□□□ 0.33
CDC42BPB-209ENST00000634889 MAP3K21Q5TCX8 1036 aa17.13■□□□□ 0.33
CDC42BPB-209ENST00000634889 MFSD14CQ5VZR4 134 aa17.13■□□□□ 0.33
CDC42BPB-209ENST00000634889 FBXO11Q86XK2 927 aa17.13■□□□□ 0.33
CDC42BPB-209ENST00000634889 BRF1Q92994 677 aa17.13■□□□□ 0.33
CDC42BPB-209ENST00000634889 AMNQ9BXJ7 453 aa17.13■□□□□ 0.33
CDC42BPB-209ENST00000634889 VAT1LQ9HCJ6 419 aa17.13■□□□□ 0.33
CDC42BPB-209ENST00000634889 RBM28Q9NW13 759 aaKnown RBP17.13■□□□□ 0.33
CDC42BPB-209ENST00000634889 FLRT1Q9NZU1 646 aa17.13■□□□□ 0.33
CDC42BPB-209ENST00000634889 ABCB11O95342 1321 aa17.13■□□□□ 0.33
CDC42BPB-209ENST00000634889 RXRAP19793 462 aa17.12■□□□□ 0.33
CDC42BPB-209ENST00000634889 EVCP57679 992 aa17.12■□□□□ 0.33
CDC42BPB-209ENST00000634889 SLC35G1Q2M3R5 365 aa17.12■□□□□ 0.33
CDC42BPB-209ENST00000634889 USH1GQ495M9 461 aa17.12■□□□□ 0.33
CDC42BPB-209ENST00000634889 ZNF467Q7Z7K2 595 aaPredicted RBP17.12■□□□□ 0.33
CDC42BPB-209ENST00000634889 MSL3Q8N5Y2 521 aaKnown RBP17.12■□□□□ 0.33
CDC42BPB-209ENST00000634889 CLEC4DQ8WXI8 215 aa17.12■□□□□ 0.33
CDC42BPB-209ENST00000634889 TMEM106CQ9BVX2 250 aa17.12■□□□□ 0.33
CDC42BPB-209ENST00000634889 UPF3BQ9BZI7 483 aaKnown RBP17.12■□□□□ 0.33
CDC42BPB-209ENST00000634889 CYP39A1Q9NYL5 469 aa17.12■□□□□ 0.33
CDC42BPB-209ENST00000634889 NID2Q14112 1375 aa17.12■□□□□ 0.33
CDC42BPB-209ENST00000634889 SMCHD1A6NHR9 2005 aa17.11■□□□□ 0.33
CDC42BPB-209ENST00000634889 PNMA6FA0A0J9YX94 578 aa17.11■□□□□ 0.33
CDC42BPB-209ENST00000634889 CCL5P13501 91 aa17.11■□□□□ 0.33
CDC42BPB-209ENST00000634889 PRKAR2AP13861 404 aaKnown RBP17.11■□□□□ 0.33
CDC42BPB-209ENST00000634889 APOBRQ0VD83 1088 aa17.11■□□□□ 0.33
CDC42BPB-209ENST00000634889 RTN1Q16799 776 aa17.11■□□□□ 0.33
CDC42BPB-209ENST00000634889 TMTC3Q6ZXV5 915 aa17.11■□□□□ 0.33
CDC42BPB-209ENST00000634889 CCDC144CPQ8IYA2 1237 aa17.11■□□□□ 0.33
CDC42BPB-209ENST00000634889 RGS22Q8NE09 1264 aa17.11■□□□□ 0.33
CDC42BPB-209ENST00000634889 RRP36Q96EU6 259 aaKnown RBP17.11■□□□□ 0.33
CDC42BPB-209ENST00000634889 PIGSQ96S52 555 aa17.11■□□□□ 0.33
CDC42BPB-209ENST00000634889 HMX1Q9NP08 348 aaPredicted RBP17.11■□□□□ 0.33
CDC42BPB-209ENST00000634889 RPTORQ8N122 1335 aa17.11■□□□□ 0.33
CDC42BPB-209ENST00000634889 BRCA2P51587 3418 aa17.1■□□□□ 0.33
CDC42BPB-209ENST00000634889 CCDC196A0A1B0GTZ2 297 aa17.1■□□□□ 0.33
CDC42BPB-209ENST00000634889 GOLGA8AA7E2F4 631 aa17.1■□□□□ 0.33
CDC42BPB-209ENST00000634889 GOLGA8BA8MQT2 603 aa17.1■□□□□ 0.33
CDC42BPB-209ENST00000634889 NFIBO00712 420 aa17.1■□□□□ 0.33
CDC42BPB-209ENST00000634889 PLEKHA8P1O95397 391 aa17.1■□□□□ 0.33
CDC42BPB-209ENST00000634889 TAL1P17542 331 aaPredicted RBP17.1■□□□□ 0.33
CDC42BPB-209ENST00000634889 CACNB2Q08289 660 aaPredicted RBP17.1■□□□□ 0.33
CDC42BPB-209ENST00000634889 TRIM32Q13049 653 aa17.1■□□□□ 0.33
CDC42BPB-209ENST00000634889 TOB2Q14106 344 aaPredicted RBP17.1■□□□□ 0.33
CDC42BPB-209ENST00000634889 MTFR1Q15390 333 aa17.1■□□□□ 0.33
CDC42BPB-209ENST00000634889 IFFO2Q5TF58 517 aa17.1■□□□□ 0.33
CDC42BPB-209ENST00000634889 MAMDC4Q6UXC1 1216 aa17.1■□□□□ 0.33
CDC42BPB-209ENST00000634889 NSMFQ6X4W1 530 aa17.1■□□□□ 0.33
CDC42BPB-209ENST00000634889 HOMER1Q86YM7 354 aa17.1■□□□□ 0.33
CDC42BPB-209ENST00000634889 RAB11FIP4Q86YS3 637 aa17.1■□□□□ 0.33
CDC42BPB-209ENST00000634889 SRBD1Q8N5C6 995 aaKnown RBP17.1■□□□□ 0.33
CDC42BPB-209ENST00000634889 FAM133AQ8N9E0 248 aa17.1■□□□□ 0.33
CDC42BPB-209ENST00000634889 RNF208Q9H0X6 261 aa17.1■□□□□ 0.33
CDC42BPB-209ENST00000634889 UNC93B1Q9H1C4 597 aa17.1■□□□□ 0.33
CDC42BPB-209ENST00000634889 PAK6Q9NQU5 681 aaPredicted RBP17.1■□□□□ 0.33
CDC42BPB-209ENST00000634889 PDRG1Q9NUG6 133 aa17.1■□□□□ 0.33
CDC42BPB-209ENST00000634889 SEC63Q9UGP8 760 aaKnown RBP17.1■□□□□ 0.33
CDC42BPB-209ENST00000634889 NRBP1Q9UHY1 535 aa17.1■□□□□ 0.33
CDC42BPB-209ENST00000634889 MRPL11Q9Y3B7 192 aaKnown RBP17.1■□□□□ 0.33
CDC42BPB-209ENST00000634889 POTEB2H3BUK9 544 aa17.09■□□□□ 0.33
CDC42BPB-209ENST00000634889 PPP1R11O60927 126 aaPredicted RBP17.09■□□□□ 0.33
CDC42BPB-209ENST00000634889 MYCP01106 439 aaPredicted RBP17.09■□□□□ 0.33
CDC42BPB-209ENST00000634889 GJB1P08034 283 aa17.09■□□□□ 0.33
CDC42BPB-209ENST00000634889 CAPN2P17655 700 aa17.09■□□□□ 0.33
CDC42BPB-209ENST00000634889 METAP2P50579 478 aaKnown RBP eCLIP17.09■□□□□ 0.33
CDC42BPB-209ENST00000634889 RNF207Q6ZRF8 634 aa17.09■□□□□ 0.33
CDC42BPB-209ENST00000634889 MCF2L2Q86YR7 1114 aa17.09■□□□□ 0.33
CDC42BPB-209ENST00000634889 TINF2Q9BSI4 451 aa17.09■□□□□ 0.33
CDC42BPB-209ENST00000634889 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.09■□□□□ 0.33
CDC42BPB-209ENST00000634889 ALDH8A1Q9H2A2 487 aaPredicted RBP17.09■□□□□ 0.33
CDC42BPB-209ENST00000634889 PCDHA1Q9Y5I3 950 aa17.09■□□□□ 0.33
CDC42BPB-209ENST00000634889 SYNGAP1Q96PV0 1343 aa17.09■□□□□ 0.33
CDC42BPB-209ENST00000634889 LCTP09848 1927 aa17.09■□□□□ 0.33
CDC42BPB-209ENST00000634889 PTPDC1A2A3K4 754 aa17.08■□□□□ 0.32
CDC42BPB-209ENST00000634889 CYBAP13498 195 aa17.08■□□□□ 0.32
CDC42BPB-209ENST00000634889 CYP2C19P33261 490 aa17.08■□□□□ 0.32
CDC42BPB-209ENST00000634889 CNTN2Q02246 1040 aa17.08■□□□□ 0.32
CDC42BPB-209ENST00000634889 BAATQ14032 418 aaPredicted RBP17.08■□□□□ 0.32
CDC42BPB-209ENST00000634889 SAMD3Q8N6K7 520 aa17.08■□□□□ 0.32
CDC42BPB-209ENST00000634889 FGD4Q96M96 766 aa17.08■□□□□ 0.32
CDC42BPB-209ENST00000634889 MAP3K20Q9NYL2 800 aaKnown RBP17.08■□□□□ 0.32
CDC42BPB-209ENST00000634889 NAP1L2Q9ULW6 460 aaPredicted RBP17.08■□□□□ 0.32
CDC42BPB-209ENST00000634889 CNTNAP5Q8WYK1 1306 aa17.07■□□□□ 0.32
CDC42BPB-209ENST00000634889 LOC102724159A0A0B4J2E5 919 aa17.07■□□□□ 0.32
CDC42BPB-209ENST00000634889 GJA8P48165 433 aa17.07■□□□□ 0.32
CDC42BPB-209ENST00000634889 RBM25P49756 843 aaKnown RBP17.07■□□□□ 0.32
CDC42BPB-209ENST00000634889 SOX10P56693 466 aa17.07■□□□□ 0.32
CDC42BPB-209ENST00000634889 RPS6P62753 249 aaKnown RBP17.07■□□□□ 0.32
CDC42BPB-209ENST00000634889 GHRHRQ02643 423 aa17.07■□□□□ 0.32
CDC42BPB-209ENST00000634889 PWP2Q15269 919 aaKnown RBP17.07■□□□□ 0.32
CDC42BPB-209ENST00000634889 ANKRD1Q15327 319 aa17.07■□□□□ 0.32
CDC42BPB-209ENST00000634889 SLC30A10Q6XR72 485 aa17.07■□□□□ 0.32
CDC42BPB-209ENST00000634889 CMTR1Q8N1G2 835 aaKnown RBP17.07■□□□□ 0.32
CDC42BPB-209ENST00000634889 ZNF274Q96GC6 653 aaPredicted RBP17.07■□□□□ 0.32
CDC42BPB-209ENST00000634889 UPF2Q9HAU5 1272 aaKnown RBP17.07■□□□□ 0.32
CDC42BPB-209ENST00000634889 FAM217BQ9NTX9 383 aaPredicted RBP17.07■□□□□ 0.32
CDC42BPB-209ENST00000634889 ADD3Q9UEY8 706 aaKnown RBP17.07■□□□□ 0.32
CDC42BPB-209ENST00000634889 POTEFA5A3E0 1075 aa17.06■□□□□ 0.32
CDC42BPB-209ENST00000634889 ASB14A6NK59 587 aa17.06■□□□□ 0.32
CDC42BPB-209ENST00000634889 MSCO60682 206 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms