RNA–Protein interactions for RNA: ENST00000625216.2

PNKP-217, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-217ENST00000625216 CCPG1Q9ULG6 757 aa14.76□□□□□ -0.05
PNKP-217ENST00000625216 ASB14A6NK59 587 aa14.75□□□□□ -0.05
PNKP-217ENST00000625216 B4E1Z4 1266 aa14.75□□□□□ -0.05
PNKP-217ENST00000625216 TSGA10IPQ3SY00 556 aa14.75□□□□□ -0.05
PNKP-217ENST00000625216 SLC39A5Q6ZMH5 540 aa14.75□□□□□ -0.05
PNKP-217ENST00000625216 RASGRP2Q7LDG7 609 aa14.75□□□□□ -0.05
PNKP-217ENST00000625216 PNMA1Q8ND90 353 aa14.75□□□□□ -0.05
PNKP-217ENST00000625216 FGD4Q96M96 766 aa14.75□□□□□ -0.05
PNKP-217ENST00000625216 JAKMIP1Q96N16 626 aaKnown RBP14.75□□□□□ -0.05
PNKP-217ENST00000625216 ZKSCAN3Q9BRR0 538 aa14.75□□□□□ -0.05
PNKP-217ENST00000625216 TSEN34Q9BSV6 310 aaKnown RBP14.75□□□□□ -0.05
PNKP-217ENST00000625216 UPF3BQ9BZI7 483 aaKnown RBP14.75□□□□□ -0.05
PNKP-217ENST00000625216 KAT14Q9H8E8 782 aa14.75□□□□□ -0.05
PNKP-217ENST00000625216 ZMYND8Q9ULU4 1186 aaPredicted RBP14.75□□□□□ -0.05
PNKP-217ENST00000625216 COL11A1P12107 1806 aaPredicted RBP14.75□□□□□ -0.05
PNKP-217ENST00000625216 FRMPD2Q68DX3 1309 aaPredicted RBP14.74□□□□□ -0.05
PNKP-217ENST00000625216 DUSP11O75319 330 aaKnown RBP14.74□□□□□ -0.05
PNKP-217ENST00000625216 MYCNP04198 464 aaPredicted RBP14.74□□□□□ -0.05
PNKP-217ENST00000625216 CPA1P15085 419 aa14.74□□□□□ -0.05
PNKP-217ENST00000625216 ADCYAP1R1P41586 468 aa14.74□□□□□ -0.05
PNKP-217ENST00000625216 FXR1P51114 621 aaKnown RBP eCLIP14.74□□□□□ -0.05
PNKP-217ENST00000625216 SNAP25P60880 206 aa14.74□□□□□ -0.05
PNKP-217ENST00000625216 CNTN2Q02246 1040 aa14.74□□□□□ -0.05
PNKP-217ENST00000625216 TRDNQ13061 729 aa14.74□□□□□ -0.05
PNKP-217ENST00000625216 C1orf53Q5VUE5 145 aa14.74□□□□□ -0.05
PNKP-217ENST00000625216 ARMCX2Q7L311 632 aa14.74□□□□□ -0.05
PNKP-217ENST00000625216 SNX21Q969T3 373 aa14.74□□□□□ -0.05
PNKP-217ENST00000625216 UBAC1Q9BSL1 405 aa14.74□□□□□ -0.05
PNKP-217ENST00000625216 TM6SF1Q9BZW5 370 aa14.74□□□□□ -0.05
PNKP-217ENST00000625216 CYP39A1Q9NYL5 469 aa14.74□□□□□ -0.05
PNKP-217ENST00000625216 ZHX1Q9UKY1 873 aaPredicted RBP14.74□□□□□ -0.05
PNKP-217ENST00000625216 PHF24Q9UPV7 400 aa14.74□□□□□ -0.05
PNKP-217ENST00000625216 RANBP2P49792 3224 aaKnown RBP14.73□□□□□ -0.05
PNKP-217ENST00000625216 WDR19Q8NEZ3 1342 aa14.73□□□□□ -0.05
PNKP-217ENST00000625216 LOC102724159A0A0B4J2E5 919 aa14.73□□□□□ -0.05
PNKP-217ENST00000625216 SOWAHBA6NEL2 793 aa14.73□□□□□ -0.05
PNKP-217ENST00000625216 ATN1P54259 1190 aaPredicted RBP14.73□□□□□ -0.05
PNKP-217ENST00000625216 PWP2Q15269 919 aaKnown RBP14.73□□□□□ -0.05
PNKP-217ENST00000625216 MUM1L1Q5H9M0 696 aa14.73□□□□□ -0.05
PNKP-217ENST00000625216 CCDC144CPQ8IYA2 1237 aa14.73□□□□□ -0.05
PNKP-217ENST00000625216 ENAHQ8N8S7 591 aaPredicted RBP14.73□□□□□ -0.05
PNKP-217ENST00000625216 MAF1Q9H063 256 aa14.73□□□□□ -0.05
PNKP-217ENST00000625216 SPC25Q9HBM1 224 aa14.73□□□□□ -0.05
PNKP-217ENST00000625216 TNKSO95271 1327 aa14.72□□□□□ -0.05
PNKP-217ENST00000625216 MOXD2PA6NHM9 499 aa14.72□□□□□ -0.05
PNKP-217ENST00000625216 ADAMTS4O75173 837 aa14.72□□□□□ -0.05
PNKP-217ENST00000625216 PGK1P00558 417 aa14.72□□□□□ -0.05
PNKP-217ENST00000625216 SYN1P17600 705 aa14.72□□□□□ -0.05
PNKP-217ENST00000625216 CASTP20810 708 aaKnown RBP14.72□□□□□ -0.05
PNKP-217ENST00000625216 NEK4P51957 841 aa14.72□□□□□ -0.05
PNKP-217ENST00000625216 RTP1P59025 263 aa14.72□□□□□ -0.05
PNKP-217ENST00000625216 SNX17Q15036 470 aa14.72□□□□□ -0.05
PNKP-217ENST00000625216 ASPRV1Q53RT3 343 aa14.72□□□□□ -0.05
PNKP-217ENST00000625216 NSMFQ6X4W1 530 aa14.72□□□□□ -0.05
PNKP-217ENST00000625216 KLHDC9Q8NEP7 349 aa14.72□□□□□ -0.05
PNKP-217ENST00000625216 ZSWIM6Q9HCJ5 1215 aa14.72□□□□□ -0.05
PNKP-217ENST00000625216 ADD3Q9UEY8 706 aaKnown RBP14.72□□□□□ -0.05
PNKP-217ENST00000625216 PRKAG2Q9UGJ0 569 aa14.72□□□□□ -0.05
PNKP-217ENST00000625216 ZNFX1Q9P2E3 1918 aaKnown RBP14.72□□□□□ -0.05
PNKP-217ENST00000625216 TRIOBPQ9H2D6 2365 aa14.71□□□□□ -0.05
PNKP-217ENST00000625216 E7EWF7 191 aa14.71□□□□□ -0.05
PNKP-217ENST00000625216 CST5P28325 142 aaPredicted RBP14.71□□□□□ -0.05
PNKP-217ENST00000625216 MAGEA10P43363 369 aaPredicted RBP14.71□□□□□ -0.05
PNKP-217ENST00000625216 KRT32Q14532 448 aa14.71□□□□□ -0.05
PNKP-217ENST00000625216 CCDC144BQ3MJ40 725 aa14.71□□□□□ -0.05
PNKP-217ENST00000625216 IFIT1BQ5T764 474 aaKnown RBP14.71□□□□□ -0.05
PNKP-217ENST00000625216 HSCBQ8IWL3 235 aa14.71□□□□□ -0.05
PNKP-217ENST00000625216 PCSK9Q8NBP7 692 aaKnown RBP14.71□□□□□ -0.05
PNKP-217ENST00000625216 RGS22Q8NE09 1264 aa14.71□□□□□ -0.05
PNKP-217ENST00000625216 NUP133Q8WUM0 1156 aa14.71□□□□□ -0.05
PNKP-217ENST00000625216 FERMT2Q96AC1 680 aa14.71□□□□□ -0.05
PNKP-217ENST00000625216 KATNBL1Q9H079 304 aa14.71□□□□□ -0.05
PNKP-217ENST00000625216 SYNRGQ9UMZ2 1314 aa14.7□□□□□ -0.06
PNKP-217ENST00000625216 ST18O60284 1047 aa14.7□□□□□ -0.06
PNKP-217ENST00000625216 PARP1P09874 1014 aaKnown RBP14.7□□□□□ -0.06
PNKP-217ENST00000625216 GOLGA8HP0CJ92 632 aa14.7□□□□□ -0.06
PNKP-217ENST00000625216 RPS6KB1P23443 525 aa14.7□□□□□ -0.06
PNKP-217ENST00000625216 PSMA5P28066 241 aa14.7□□□□□ -0.06
PNKP-217ENST00000625216 GJA9P57773 515 aa14.7□□□□□ -0.06
PNKP-217ENST00000625216 NKX3-2P78367 333 aa14.7□□□□□ -0.06
PNKP-217ENST00000625216 BAATQ14032 418 aaPredicted RBP14.7□□□□□ -0.06
PNKP-217ENST00000625216 BECN1Q14457 450 aa14.7□□□□□ -0.06
PNKP-217ENST00000625216 IQSEC1Q6DN90 963 aa14.7□□□□□ -0.06
PNKP-217ENST00000625216 MORC4Q8TE76 937 aa14.7□□□□□ -0.06
PNKP-217ENST00000625216 CLEC4DQ8WXI8 215 aa14.7□□□□□ -0.06
PNKP-217ENST00000625216 NEK1Q96PY6 1258 aa14.7□□□□□ -0.06
PNKP-217ENST00000625216 LBHD1Q9BQE6 289 aaPredicted RBP14.7□□□□□ -0.06
PNKP-217ENST00000625216 UBA5Q9GZZ9 404 aa14.7□□□□□ -0.06
PNKP-217ENST00000625216 UPF3AQ9H1J1 476 aaKnown RBP14.7□□□□□ -0.06
PNKP-217ENST00000625216 PCDH10Q9P2E7 1040 aa14.7□□□□□ -0.06
PNKP-217ENST00000625216 ATP11BQ9Y2G3 1177 aa14.7□□□□□ -0.06
PNKP-217ENST00000625216 ERICH2A1L162 156 aa14.69□□□□□ -0.06
PNKP-217ENST00000625216 PTPDC1A2A3K4 754 aa14.69□□□□□ -0.06
PNKP-217ENST00000625216 NFIBO00712 420 aa14.69□□□□□ -0.06
PNKP-217ENST00000625216 ACLYP53396 1101 aa14.69□□□□□ -0.06
PNKP-217ENST00000625216 TNFAIP2Q03169 654 aa14.69□□□□□ -0.06
PNKP-217ENST00000625216 SEC23AQ15436 765 aa14.69□□□□□ -0.06
PNKP-217ENST00000625216 KCNA10Q16322 511 aa14.69□□□□□ -0.06
PNKP-217ENST00000625216 CCSAPQ6IQ19 270 aaPredicted RBP14.69□□□□□ -0.06
PNKP-217ENST00000625216 BLOC1S2Q6QNY1 142 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms