RNA–Protein interactions for RNA: ENST00000623364.3

CDKL5-204, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 3

Gene CDKL5, Length 483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-204ENST00000623364 UBE4AQ14139 1066 aa8.16□□□□□ -1.1
CDKL5-204ENST00000623364 C19orf48Q6RUI8 117 aa8.16□□□□□ -1.1
CDKL5-204ENST00000623364 TMEM121BQ9BXQ6 578 aaPredicted RBP8.16□□□□□ -1.1
CDKL5-204ENST00000623364 ADAM33Q9BZ11 813 aa8.16□□□□□ -1.1
CDKL5-204ENST00000623364 ALDH8A1Q9H2A2 487 aaPredicted RBP8.16□□□□□ -1.1
CDKL5-204ENST00000623364 SMOC2Q9H3U7 446 aa8.16□□□□□ -1.1
CDKL5-204ENST00000623364 PARD6AQ9NPB6 346 aa8.16□□□□□ -1.1
CDKL5-204ENST00000623364 EMILIN3Q9NT22 766 aa8.16□□□□□ -1.1
CDKL5-204ENST00000623364 SMG5Q9UPR3 1016 aaKnown RBP8.16□□□□□ -1.1
CDKL5-204ENST00000623364 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.16□□□□□ -1.1
CDKL5-204ENST00000623364 ABHD14A-ACY1A0A1B0GW23 586 aa8.15□□□□□ -1.1
CDKL5-204ENST00000623364 J3QKU1 62 aa8.15□□□□□ -1.1
CDKL5-204ENST00000623364 STK25O00506 426 aa8.15□□□□□ -1.1
CDKL5-204ENST00000623364 EFCAB14O75071 495 aa8.15□□□□□ -1.1
CDKL5-204ENST00000623364 SP100P23497 879 aaPredicted RBP8.15□□□□□ -1.1
CDKL5-204ENST00000623364 ZEB1P37275 1124 aaPredicted RBP8.15□□□□□ -1.1
CDKL5-204ENST00000623364 RIPPLY3P57055 190 aa8.15□□□□□ -1.1
CDKL5-204ENST00000623364 DIXDC1Q155Q3 683 aa8.15□□□□□ -1.1
CDKL5-204ENST00000623364 HDGFL1Q5TGJ6 251 aa8.15□□□□□ -1.1
CDKL5-204ENST00000623364 CATSPERGQ6ZRH7 1159 aa8.15□□□□□ -1.1
CDKL5-204ENST00000623364 NCAPG2Q86XI2 1143 aa8.15□□□□□ -1.1
CDKL5-204ENST00000623364 FBXO11Q86XK2 927 aa8.15□□□□□ -1.1
CDKL5-204ENST00000623364 EFHBQ8N7U6 833 aa8.15□□□□□ -1.1
CDKL5-204ENST00000623364 ATRIPQ8WXE1 791 aa8.15□□□□□ -1.1
CDKL5-204ENST00000623364 SUSD6Q92537 303 aa8.15□□□□□ -1.1
CDKL5-204ENST00000623364 SPATC1LQ9H0A9 340 aa8.15□□□□□ -1.1
CDKL5-204ENST00000623364 ZHX1Q9UKY1 873 aaPredicted RBP8.15□□□□□ -1.1
CDKL5-204ENST00000623364 NUDCQ9Y266 331 aa8.15□□□□□ -1.1
CDKL5-204ENST00000623364 DIS3Q9Y2L1 958 aaKnown RBP8.15□□□□□ -1.1
CDKL5-204ENST00000623364 GPSM3Q9Y4H4 160 aa8.15□□□□□ -1.1
CDKL5-204ENST00000623364 ASXL3Q9C0F0 2248 aa8.14□□□□□ -1.11
CDKL5-204ENST00000623364 GRIN2DO15399 1336 aa8.14□□□□□ -1.11
CDKL5-204ENST00000623364 NEFMP07197 916 aa8.14□□□□□ -1.11
CDKL5-204ENST00000623364 ARP10275 920 aa8.14□□□□□ -1.11
CDKL5-204ENST00000623364 SMPD1P17405 629 aa8.14□□□□□ -1.11
CDKL5-204ENST00000623364 RFX1P22670 979 aa8.14□□□□□ -1.11
CDKL5-204ENST00000623364 PICALMQ13492 652 aa8.14□□□□□ -1.11
CDKL5-204ENST00000623364 CAVIN4Q5BKX8 364 aa8.14□□□□□ -1.11
CDKL5-204ENST00000623364 C1orf210Q8IVY1 113 aa8.14□□□□□ -1.11
CDKL5-204ENST00000623364 GATA6Q92908 595 aa8.14□□□□□ -1.11
CDKL5-204ENST00000623364 CLMPQ9H6B4 373 aa8.14□□□□□ -1.11
CDKL5-204ENST00000623364 TSHZ2Q9NRE2 1034 aa8.14□□□□□ -1.11
CDKL5-204ENST00000623364 TRMT13Q9NUP7 481 aaKnown RBP8.14□□□□□ -1.11
CDKL5-204ENST00000623364 KCNK4Q9NYG8 393 aa8.14□□□□□ -1.11
CDKL5-204ENST00000623364 FBXL21Q9UKT6 434 aa8.14□□□□□ -1.11
CDKL5-204ENST00000623364 BARX2Q9UMQ3 279 aaPredicted RBP8.14□□□□□ -1.11
CDKL5-204ENST00000623364 CREBBPQ92793 2442 aa8.13□□□□□ -1.11
CDKL5-204ENST00000623364 ZNFX1Q9P2E3 1918 aaKnown RBP8.13□□□□□ -1.11
CDKL5-204ENST00000623364 CACNA1IQ9P0X4 2223 aa8.13□□□□□ -1.11
CDKL5-204ENST00000623364 SPDYE16A6NNV3 312 aaPredicted RBP8.13□□□□□ -1.11
CDKL5-204ENST00000623364 ZEB2O60315 1214 aa8.13□□□□□ -1.11
CDKL5-204ENST00000623364 BEX3Q00994 111 aa8.13□□□□□ -1.11
CDKL5-204ENST00000623364 TBC1D8BQ0IIM8 1120 aa8.13□□□□□ -1.11
CDKL5-204ENST00000623364 SPEM2Q0P670 501 aa8.13□□□□□ -1.11
CDKL5-204ENST00000623364 IFIT5Q13325 482 aaKnown RBP8.13□□□□□ -1.11
CDKL5-204ENST00000623364 BFSP2Q13515 415 aa8.13□□□□□ -1.11
CDKL5-204ENST00000623364 COL28A1Q2UY09 1125 aa8.13□□□□□ -1.11
CDKL5-204ENST00000623364 LRRFIP1Q32MZ4 808 aaKnown RBP8.13□□□□□ -1.11
CDKL5-204ENST00000623364 CNKSR3Q6P9H4 555 aa8.13□□□□□ -1.11
CDKL5-204ENST00000623364 FBXO33Q7Z6M2 555 aa8.13□□□□□ -1.11
CDKL5-204ENST00000623364 MSL3Q8N5Y2 521 aaKnown RBP8.13□□□□□ -1.11
CDKL5-204ENST00000623364 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.13□□□□□ -1.11
CDKL5-204ENST00000623364 C11orf84Q9BUA3 381 aaPredicted RBP8.13□□□□□ -1.11
CDKL5-204ENST00000623364 METTL22Q9BUU2 404 aaPredicted RBP8.13□□□□□ -1.11
CDKL5-204ENST00000623364 RXFP3Q9NSD7 469 aa8.13□□□□□ -1.11
CDKL5-204ENST00000623364 ATG2AQ2TAZ0 1938 aa8.12□□□□□ -1.11
CDKL5-204ENST00000623364 ENO4A6NNW6 628 aa8.12□□□□□ -1.11
CDKL5-204ENST00000623364 TBC1D4O60343 1298 aa8.12□□□□□ -1.11
CDKL5-204ENST00000623364 PGK2P07205 417 aa8.12□□□□□ -1.11
CDKL5-204ENST00000623364 CSF1RP07333 972 aa8.12□□□□□ -1.11
CDKL5-204ENST00000623364 HTRA4P83105 476 aaPredicted RBP8.12□□□□□ -1.11
CDKL5-204ENST00000623364 IKBKEQ14164 716 aa8.12□□□□□ -1.11
CDKL5-204ENST00000623364 PLS1Q14651 629 aa8.12□□□□□ -1.11
CDKL5-204ENST00000623364 RRP1BQ14684 758 aaKnown RBP8.12□□□□□ -1.11
CDKL5-204ENST00000623364 UBE3BQ7Z3V4 1068 aa8.12□□□□□ -1.11
CDKL5-204ENST00000623364 SIX5Q8N196 739 aa8.12□□□□□ -1.11
CDKL5-204ENST00000623364 MMP19Q99542 508 aa8.12□□□□□ -1.11
CDKL5-204ENST00000623364 FEZ1Q99689 392 aa8.12□□□□□ -1.11
CDKL5-204ENST00000623364 EPC1Q9H2F5 836 aa8.12□□□□□ -1.11
CDKL5-204ENST00000623364 ERVK-5Q9HDB9 667 aa8.12□□□□□ -1.11
CDKL5-204ENST00000623364 CNNM1Q9NRU3 951 aa8.12□□□□□ -1.11
CDKL5-204ENST00000623364 BABAM1Q9NWV8 329 aa8.12□□□□□ -1.11
CDKL5-204ENST00000623364 PCDHGA2Q9Y5H1 932 aa8.12□□□□□ -1.11
CDKL5-204ENST00000623364 TANC1Q9C0D5 1861 aa8.12□□□□□ -1.11
CDKL5-204ENST00000623364 NOTCH2Q04721 2471 aa8.12□□□□□ -1.11
CDKL5-204ENST00000623364 UBR5O95071 2799 aaPredicted RBP8.11□□□□□ -1.11
CDKL5-204ENST00000623364 MROH5Q6ZUA9 1318 aa8.11□□□□□ -1.11
CDKL5-204ENST00000623364 GRM6O15303 877 aa8.11□□□□□ -1.11
CDKL5-204ENST00000623364 CTAGE5O15320 804 aa8.11□□□□□ -1.11
CDKL5-204ENST00000623364 FOXD2O60548 495 aaPredicted RBP8.11□□□□□ -1.11
CDKL5-204ENST00000623364 LRP3O75074 770 aa8.11□□□□□ -1.11
CDKL5-204ENST00000623364 RB1P06400 928 aa8.11□□□□□ -1.11
CDKL5-204ENST00000623364 CTNNB1P35222 781 aa8.11□□□□□ -1.11
CDKL5-204ENST00000623364 PSMC6P62333 389 aa8.11□□□□□ -1.11
CDKL5-204ENST00000623364 NKX3-2P78367 333 aa8.11□□□□□ -1.11
CDKL5-204ENST00000623364 FOXC1Q12948 553 aa8.11□□□□□ -1.11
CDKL5-204ENST00000623364 ZNF792Q3KQV3 632 aa8.11□□□□□ -1.11
CDKL5-204ENST00000623364 ZNF528Q3MIS6 628 aa8.11□□□□□ -1.11
CDKL5-204ENST00000623364 LDHAL6AQ6ZMR3 332 aa8.11□□□□□ -1.11
CDKL5-204ENST00000623364 WDR66Q8TBY9 1149 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms