RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 CFAP73A6NFT4 308 aa8.31□□□□□ -1.08
TRIM49B-202ENST00000622138 SOWAHDA6NJG2 315 aa8.31□□□□□ -1.08
TRIM49B-202ENST00000622138 ERVV-2B6SEH9 535 aa8.31□□□□□ -1.08
TRIM49B-202ENST00000622138 ZNF213O14771 459 aa8.31□□□□□ -1.08
TRIM49B-202ENST00000622138 CREB3O43889 395 aa8.31□□□□□ -1.08
TRIM49B-202ENST00000622138 SMIM24O75264 130 aa8.31□□□□□ -1.08
TRIM49B-202ENST00000622138 ALADP13716 330 aa8.31□□□□□ -1.08
TRIM49B-202ENST00000622138 TNFRSF8P28908 595 aa8.31□□□□□ -1.08
TRIM49B-202ENST00000622138 ALDH3A1P30838 453 aa8.31□□□□□ -1.08
TRIM49B-202ENST00000622138 ADD2P35612 726 aa8.31□□□□□ -1.08
TRIM49B-202ENST00000622138 CTCFP49711 727 aaPredicted RBP8.31□□□□□ -1.08
TRIM49B-202ENST00000622138 ADKP55263 362 aaKnown RBP8.31□□□□□ -1.08
TRIM49B-202ENST00000622138 DEUP1Q05D60 604 aa8.31□□□□□ -1.08
TRIM49B-202ENST00000622138 PNOCQ13519 176 aa8.31□□□□□ -1.08
TRIM49B-202ENST00000622138 SLC39A14Q15043 492 aa8.31□□□□□ -1.08
TRIM49B-202ENST00000622138 GLE1Q53GS7 698 aaKnown RBP8.31□□□□□ -1.08
TRIM49B-202ENST00000622138 KRT40Q6A162 431 aa8.31□□□□□ -1.08
TRIM49B-202ENST00000622138 NCAPH2Q6IBW4 605 aa8.31□□□□□ -1.08
TRIM49B-202ENST00000622138 RAD9BQ6WBX8 426 aa8.31□□□□□ -1.08
TRIM49B-202ENST00000622138 TOM1L2Q6ZVM7 507 aa8.31□□□□□ -1.08
TRIM49B-202ENST00000622138 ARFGAP2Q8N6H7 521 aa8.31□□□□□ -1.08
TRIM49B-202ENST00000622138 CAVIN3Q969G5 261 aa8.31□□□□□ -1.08
TRIM49B-202ENST00000622138 MAP3K14Q99558 947 aa8.31□□□□□ -1.08
TRIM49B-202ENST00000622138 ALG1Q9BT22 464 aa8.31□□□□□ -1.08
TRIM49B-202ENST00000622138 GREM2Q9H772 168 aa8.31□□□□□ -1.08
TRIM49B-202ENST00000622138 BAIAP2L1Q9UHR4 511 aa8.31□□□□□ -1.08
TRIM49B-202ENST00000622138 HPSEQ9Y251 543 aa8.31□□□□□ -1.08
TRIM49B-202ENST00000622138 WDR19Q8NEZ3 1342 aa8.31□□□□□ -1.08
TRIM49B-202ENST00000622138 DCCP43146 1447 aa8.31□□□□□ -1.08
TRIM49B-202ENST00000622138 LRRD1A4D1F6 860 aa8.31□□□□□ -1.08
TRIM49B-202ENST00000622138 B4E1Z4 1266 aa8.31□□□□□ -1.08
TRIM49B-202ENST00000622138 STXBP3O00186 592 aa8.31□□□□□ -1.08
TRIM49B-202ENST00000622138 DNM1LO00429 736 aa8.31□□□□□ -1.08
TRIM49B-202ENST00000622138 OPLAHO14841 1288 aa8.31□□□□□ -1.08
TRIM49B-202ENST00000622138 FOXN1O15353 648 aa8.31□□□□□ -1.08
TRIM49B-202ENST00000622138 OATP04181 439 aa8.31□□□□□ -1.08
TRIM49B-202ENST00000622138 PCCAP05165 728 aaPredicted RBP8.31□□□□□ -1.08
TRIM49B-202ENST00000622138 CSF1RP07333 972 aa8.31□□□□□ -1.08
TRIM49B-202ENST00000622138 NR1D1P20393 614 aa8.31□□□□□ -1.08
TRIM49B-202ENST00000622138 MDH1P40925 334 aaKnown RBP8.31□□□□□ -1.08
TRIM49B-202ENST00000622138 TMED1Q13445 227 aa8.31□□□□□ -1.08
TRIM49B-202ENST00000622138 MTF1Q14872 753 aa8.31□□□□□ -1.08
TRIM49B-202ENST00000622138 NKX1-1Q15270 411 aaPredicted RBP8.31□□□□□ -1.08
TRIM49B-202ENST00000622138 CMPK2Q5EBM0 449 aa8.31□□□□□ -1.08
TRIM49B-202ENST00000622138 SYNE3Q6ZMZ3 975 aa8.31□□□□□ -1.08
TRIM49B-202ENST00000622138 METTL16Q86W50 562 aaKnown RBP8.31□□□□□ -1.08
TRIM49B-202ENST00000622138 MICU3Q86XE3 530 aa8.31□□□□□ -1.08
TRIM49B-202ENST00000622138 CD302Q8IX05 232 aa8.31□□□□□ -1.08
TRIM49B-202ENST00000622138 DNAJC10Q8IXB1 793 aa8.31□□□□□ -1.08
TRIM49B-202ENST00000622138 RNPC3Q96LT9 517 aaKnown RBP8.31□□□□□ -1.08
TRIM49B-202ENST00000622138 OSBPL1AQ9BXW6 950 aa8.31□□□□□ -1.08
TRIM49B-202ENST00000622138 TRIM7Q9C029 511 aa8.31□□□□□ -1.08
TRIM49B-202ENST00000622138 FAM217BQ9NTX9 383 aaPredicted RBP8.31□□□□□ -1.08
TRIM49B-202ENST00000622138 ANKIB1Q9P2G1 1089 aa8.31□□□□□ -1.08
TRIM49B-202ENST00000622138 WWC3Q9ULE0 1092 aa8.31□□□□□ -1.08
TRIM49B-202ENST00000622138 G3BP2Q9UN86 482 aaKnown RBP8.31□□□□□ -1.08
TRIM49B-202ENST00000622138 GPR75-ASB3A0A0A6YYF3 556 aa8.3□□□□□ -1.08
TRIM49B-202ENST00000622138 PSMD14O00487 310 aa8.3□□□□□ -1.08
TRIM49B-202ENST00000622138 METAP2P50579 478 aaKnown RBP eCLIP8.3□□□□□ -1.08
TRIM49B-202ENST00000622138 CCNG1P51959 295 aa8.3□□□□□ -1.08
TRIM49B-202ENST00000622138 MRPS35P82673 323 aaKnown RBP8.3□□□□□ -1.08
TRIM49B-202ENST00000622138 PDE4BQ07343 736 aa8.3□□□□□ -1.08
TRIM49B-202ENST00000622138 IFIT5Q13325 482 aaKnown RBP8.3□□□□□ -1.08
TRIM49B-202ENST00000622138 LBRQ14739 615 aaKnown RBP8.3□□□□□ -1.08
TRIM49B-202ENST00000622138 SEPT2Q15019 361 aa8.3□□□□□ -1.08
TRIM49B-202ENST00000622138 HLFQ16534 295 aa8.3□□□□□ -1.08
TRIM49B-202ENST00000622138 SGSM1Q2NKQ1 1148 aa8.3□□□□□ -1.08
TRIM49B-202ENST00000622138 METTL24Q5JXM2 366 aa8.3□□□□□ -1.08
TRIM49B-202ENST00000622138 DPY19L2Q6NUT2 758 aa8.3□□□□□ -1.08
TRIM49B-202ENST00000622138 APOA5Q6Q788 366 aa8.3□□□□□ -1.08
TRIM49B-202ENST00000622138 SND1Q7KZF4 910 aaKnown RBP eCLIP8.3□□□□□ -1.08
TRIM49B-202ENST00000622138 DZIP3Q86Y13 1208 aaKnown RBP8.3□□□□□ -1.08
TRIM49B-202ENST00000622138 VGLL2Q8N8G2 317 aa8.3□□□□□ -1.08
TRIM49B-202ENST00000622138 ARL8AQ96BM9 186 aa8.3□□□□□ -1.08
TRIM49B-202ENST00000622138 FAM163AQ96GL9 167 aaPredicted RBP8.3□□□□□ -1.08
TRIM49B-202ENST00000622138 PLA2G12BQ9BX93 195 aa8.3□□□□□ -1.08
TRIM49B-202ENST00000622138 DNAAF2Q9NVR5 837 aaKnown RBP8.3□□□□□ -1.08
TRIM49B-202ENST00000622138 WDR35Q9P2L0 1181 aa8.3□□□□□ -1.08
TRIM49B-202ENST00000622138 ANGEL1Q9UNK9 670 aaKnown RBP8.3□□□□□ -1.08
TRIM49B-202ENST00000622138 ASB3Q9Y575 518 aa8.3□□□□□ -1.08
TRIM49B-202ENST00000622138 ABCC12Q96J65 1359 aa8.3□□□□□ -1.08
TRIM49B-202ENST00000622138 LRP6O75581 1613 aa8.3□□□□□ -1.08
TRIM49B-202ENST00000622138 HMGB1P1B2RPK0 211 aaPredicted RBP8.29□□□□□ -1.08
TRIM49B-202ENST00000622138 BMP6P22004 513 aa8.29□□□□□ -1.08
TRIM49B-202ENST00000622138 KIF5BP33176 963 aa8.29□□□□□ -1.08
TRIM49B-202ENST00000622138 SYKP43405 635 aa8.29□□□□□ -1.08
TRIM49B-202ENST00000622138 PHKA1P46020 1223 aa8.29□□□□□ -1.08
TRIM49B-202ENST00000622138 ITIH3Q06033 890 aa8.29□□□□□ -1.08
TRIM49B-202ENST00000622138 NTRK3Q16288 839 aa8.29□□□□□ -1.08
TRIM49B-202ENST00000622138 SLC9C2Q5TAH2 1124 aa8.29□□□□□ -1.08
TRIM49B-202ENST00000622138 FOXP4Q8IVH2 680 aaPredicted RBP8.29□□□□□ -1.08
TRIM49B-202ENST00000622138 CACNA2D3Q8IZS8 1091 aa8.29□□□□□ -1.08
TRIM49B-202ENST00000622138 TEKT4Q8WW24 435 aa8.29□□□□□ -1.08
TRIM49B-202ENST00000622138 ATRIPQ8WXE1 791 aa8.29□□□□□ -1.08
TRIM49B-202ENST00000622138 HVCN1Q96D96 273 aa8.29□□□□□ -1.08
TRIM49B-202ENST00000622138 ZWILCHQ9H900 591 aa8.29□□□□□ -1.08
TRIM49B-202ENST00000622138 EPB41L4AQ9HCS5 686 aaPredicted RBP8.29□□□□□ -1.08
TRIM49B-202ENST00000622138 PRDM11Q9NQV5 511 aa8.29□□□□□ -1.08
TRIM49B-202ENST00000622138 ASAP1Q9ULH1 1129 aa8.29□□□□□ -1.08
TRIM49B-202ENST00000622138 PHF24Q9UPV7 400 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms