RNA–Protein interactions for RNA: ENST00000621029.4

SEMA3B-215, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-215ENST00000621029 KIAA1211Q6ZU35 1233 aa33.92■■■■□ 3.02
SEMA3B-215ENST00000621029 NOL8Q76FK4 1167 aaKnown RBP33.92■■■■□ 3.02
SEMA3B-215ENST00000621029 RALYLQ86SE5 291 aaKnown RBP33.92■■■■□ 3.02
SEMA3B-215ENST00000621029 GDF15Q99988 308 aa33.92■■■■□ 3.02
SEMA3B-215ENST00000621029 SPC25Q9HBM1 224 aa33.92■■■■□ 3.02
SEMA3B-215ENST00000621029 PHF24Q9UPV7 400 aa33.92■■■■□ 3.02
SEMA3B-215ENST00000621029 SYNRGQ9UMZ2 1314 aa33.92■■■■□ 3.02
SEMA3B-215ENST00000621029 DUSP11O75319 330 aaKnown RBP33.91■■■■□ 3.02
SEMA3B-215ENST00000621029 ASPRV1Q53RT3 343 aa33.91■■■■□ 3.02
SEMA3B-215ENST00000621029 CYB5R4Q7L1T6 521 aa33.91■■■■□ 3.02
SEMA3B-215ENST00000621029 PCDH10Q9P2E7 1040 aa33.91■■■■□ 3.02
SEMA3B-215ENST00000621029 SMCHD1A6NHR9 2005 aa33.91■■■■□ 3.02
SEMA3B-215ENST00000621029 PARP1P09874 1014 aaKnown RBP33.9■■■■□ 3.02
SEMA3B-215ENST00000621029 USH1GQ495M9 461 aa33.9■■■■□ 3.02
SEMA3B-215ENST00000621029 PURBQ96QR8 312 aaKnown RBP33.9■■■■□ 3.02
SEMA3B-215ENST00000621029 ADAMTS4O75173 837 aa33.89■■■■□ 3.02
SEMA3B-215ENST00000621029 C6orf222P0C671 652 aaPredicted RBP33.89■■■■□ 3.02
SEMA3B-215ENST00000621029 CALML3P27482 149 aa33.89■■■■□ 3.02
SEMA3B-215ENST00000621029 TRIM60Q495X7 471 aa33.89■■■■□ 3.02
SEMA3B-215ENST00000621029 ADD3Q9UEY8 706 aaKnown RBP33.89■■■■□ 3.02
SEMA3B-215ENST00000621029 DDX49Q9Y6V7 483 aaKnown RBP33.89■■■■□ 3.02
SEMA3B-215ENST00000621029 WDR19Q8NEZ3 1342 aa33.88■■■■□ 3.01
SEMA3B-215ENST00000621029 ERICH2A1L162 156 aa33.88■■■■□ 3.01
SEMA3B-215ENST00000621029 MDM2Q00987 491 aaPredicted RBP33.88■■■■□ 3.01
SEMA3B-215ENST00000621029 RNF207Q6ZRF8 634 aa33.88■■■■□ 3.01
SEMA3B-215ENST00000621029 EEPD1Q7L9B9 569 aa33.88■■■■□ 3.01
SEMA3B-215ENST00000621029 LBHD1Q9BQE6 289 aaPredicted RBP33.88■■■■□ 3.01
SEMA3B-215ENST00000621029 UBE2OQ9C0C9 1292 aaKnown RBP33.88■■■■□ 3.01
SEMA3B-215ENST00000621029 VAT1LQ9HCJ6 419 aa33.88■■■■□ 3.01
SEMA3B-215ENST00000621029 PRDM5Q9NQX1 630 aaPredicted RBP33.88■■■■□ 3.01
SEMA3B-215ENST00000621029 A0A1W2PPC1 479 aa33.87■■■■□ 3.01
SEMA3B-215ENST00000621029 IFIT3O14879 490 aaKnown RBP33.87■■■■□ 3.01
SEMA3B-215ENST00000621029 TNFAIP2Q03169 654 aa33.87■■■■□ 3.01
SEMA3B-215ENST00000621029 CDC37Q16543 378 aaPredicted RBP33.87■■■■□ 3.01
SEMA3B-215ENST00000621029 ADGRF4Q8IZF3 695 aa33.87■■■■□ 3.01
SEMA3B-215ENST00000621029 NCOA7Q8NI08 942 aa33.87■■■■□ 3.01
SEMA3B-215ENST00000621029 CLEC4DQ8WXI8 215 aa33.87■■■■□ 3.01
SEMA3B-215ENST00000621029 TSEN34Q9BSV6 310 aaKnown RBP33.87■■■■□ 3.01
SEMA3B-215ENST00000621029 ASTN1O14525 1302 aa33.86■■■■□ 3.01
SEMA3B-215ENST00000621029 A0A1W2PQ45 241 aaPredicted RBP33.86■■■■□ 3.01
SEMA3B-215ENST00000621029 A0A1W2PQY0 241 aa33.86■■■■□ 3.01
SEMA3B-215ENST00000621029 E7EWF7 191 aa33.86■■■■□ 3.01
SEMA3B-215ENST00000621029 BMP8BP34820 402 aa33.86■■■■□ 3.01
SEMA3B-215ENST00000621029 ACLYP53396 1101 aa33.86■■■■□ 3.01
SEMA3B-215ENST00000621029 KCNA10Q16322 511 aa33.86■■■■□ 3.01
SEMA3B-215ENST00000621029 SLC30A10Q6XR72 485 aa33.86■■■■□ 3.01
SEMA3B-215ENST00000621029 SKAP1Q86WV1 359 aa33.86■■■■□ 3.01
SEMA3B-215ENST00000621029 MAP4K1Q92918 833 aa33.86■■■■□ 3.01
SEMA3B-215ENST00000621029 KATNBL1Q9H079 304 aa33.86■■■■□ 3.01
SEMA3B-215ENST00000621029 RBM8AQ9Y5S9 174 aaKnown RBP33.86■■■■□ 3.01
SEMA3B-215ENST00000621029 ADCY6O43306 1168 aa33.85■■■■□ 3.01
SEMA3B-215ENST00000621029 SEC23AQ15436 765 aa33.85■■■■□ 3.01
SEMA3B-215ENST00000621029 NUP133Q8WUM0 1156 aa33.85■■■■□ 3.01
SEMA3B-215ENST00000621029 TAF6LQ9Y6J9 622 aa33.85■■■■□ 3.01
SEMA3B-215ENST00000621029 MYADML2A6NDP7 307 aa33.84■■■■□ 3.01
SEMA3B-215ENST00000621029 SART3Q15020 963 aaKnown RBP33.84■■■■□ 3.01
SEMA3B-215ENST00000621029 GNASQ5JWF2 1037 aa33.84■■■■□ 3.01
SEMA3B-215ENST00000621029 FBXO16Q8IX29 292 aaPredicted RBP33.84■■■■□ 3.01
SEMA3B-215ENST00000621029 KLHDC9Q8NEP7 349 aa33.84■■■■□ 3.01
SEMA3B-215ENST00000621029 VTI1AQ96AJ9 217 aa33.84■■■■□ 3.01
SEMA3B-215ENST00000621029 STARD7Q9NQZ5 370 aa33.84■■■■□ 3.01
SEMA3B-215ENST00000621029 C11orf97A0A1B0GVM6 126 aaPredicted RBP33.83■■■■□ 3.01
SEMA3B-215ENST00000621029 MOXD2PA6NHM9 499 aa33.83■■■■□ 3.01
SEMA3B-215ENST00000621029 ALDH5A1P51649 535 aaPredicted RBP33.83■■■■□ 3.01
SEMA3B-215ENST00000621029 IRX5P78411 483 aaPredicted RBP33.83■■■■□ 3.01
SEMA3B-215ENST00000621029 SNX17Q15036 470 aa33.83■■■■□ 3.01
SEMA3B-215ENST00000621029 CHST3Q7LGC8 479 aa33.83■■■■□ 3.01
SEMA3B-215ENST00000621029 PCSK9Q8NBP7 692 aaKnown RBP33.83■■■■□ 3.01
SEMA3B-215ENST00000621029 MCM3APO60318 1980 aa33.82■■■■□ 3
SEMA3B-215ENST00000621029 GJA9P57773 515 aa33.82■■■■□ 3
SEMA3B-215ENST00000621029 RPS6P62753 249 aaKnown RBP33.82■■■■□ 3
SEMA3B-215ENST00000621029 TLE2Q04725 743 aa33.82■■■■□ 3
SEMA3B-215ENST00000621029 MPHOSPH6Q99547 160 aaKnown RBP33.82■■■■□ 3
SEMA3B-215ENST00000621029 AP5M1Q9H0R1 490 aa33.82■■■■□ 3
SEMA3B-215ENST00000621029 PDGFCQ9NRA1 345 aa33.82■■■■□ 3
SEMA3B-215ENST00000621029 RANBP2P49792 3224 aaKnown RBP33.82■■■■□ 3
SEMA3B-215ENST00000621029 WTAPQ15007 396 aa33.81■■■■□ 3
SEMA3B-215ENST00000621029 C1orf53Q5VUE5 145 aa33.81■■■■□ 3
SEMA3B-215ENST00000621029 STAG2Q8N3U4 1231 aa33.81■■■■□ 3
SEMA3B-215ENST00000621029 GLT1D1Q96MS3 346 aa33.81■■■■□ 3
SEMA3B-215ENST00000621029 ESYT1Q9BSJ8 1104 aa33.81■■■■□ 3
SEMA3B-215ENST00000621029 UPF3AQ9H1J1 476 aaKnown RBP33.81■■■■□ 3
SEMA3B-215ENST00000621029 VTA1Q9NP79 307 aa33.81■■■■□ 3
SEMA3B-215ENST00000621029 KLRF2D3W0D1 207 aa33.8■■■■□ 3
SEMA3B-215ENST00000621029 PQBP1O60828 265 aaKnown RBP33.8■■■■□ 3
SEMA3B-215ENST00000621029 QRICH1Q2TAL8 776 aa33.8■■■■□ 3
SEMA3B-215ENST00000621029 IQSEC1Q6DN90 963 aa33.8■■■■□ 3
SEMA3B-215ENST00000621029 STOX1Q6ZVD7 989 aa33.8■■■■□ 3
SEMA3B-215ENST00000621029 FBXO11Q86XK2 927 aa33.8■■■■□ 3
SEMA3B-215ENST00000621029 JMJD4Q9H9V9 463 aa33.8■■■■□ 3
SEMA3B-215ENST00000621029 ABCB11O95342 1321 aa33.79■■■■□ 3
SEMA3B-215ENST00000621029 ASGR1P07306 291 aa33.79■■■■□ 3
SEMA3B-215ENST00000621029 CST5P28325 142 aaPredicted RBP33.79■■■■□ 3
SEMA3B-215ENST00000621029 PDE4DQ08499 809 aa33.79■■■■□ 3
SEMA3B-215ENST00000621029 BMP2KLQ5H9B9 411 aa33.79■■■■□ 3
SEMA3B-215ENST00000621029 TMEM67Q5HYA8 995 aa33.79■■■■□ 3
SEMA3B-215ENST00000621029 CCSAPQ6IQ19 270 aaPredicted RBP33.79■■■■□ 3
SEMA3B-215ENST00000621029 TLK2Q86UE8 772 aa33.79■■■■□ 3
SEMA3B-215ENST00000621029 ANO2Q9NQ90 1003 aa33.79■■■■□ 3
SEMA3B-215ENST00000621029 DNAH12Q6ZR08 3092 aa33.79■■■■□ 3
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms