RNA–Protein interactions for RNA: ENST00000620882.4

LRRC39-204, Transcript of leucine rich repeat containing 39, humanhuman

TSL 5 BASIC

Gene LRRC39, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39-204ENST00000620882 EOMESO95936 686 aa5.08□□□□□ -1.6
LRRC39-204ENST00000620882 ATF3P18847 181 aa5.08□□□□□ -1.6
LRRC39-204ENST00000620882 GUCY1A3Q02108 690 aa5.08□□□□□ -1.6
LRRC39-204ENST00000620882 GRIK4Q16099 956 aa5.08□□□□□ -1.6
LRRC39-204ENST00000620882 SYDE2Q5VT97 1194 aa5.08□□□□□ -1.6
LRRC39-204ENST00000620882 MAMDC2Q7Z304 686 aaPredicted RBP5.08□□□□□ -1.6
LRRC39-204ENST00000620882 CMIPQ8IY22 773 aa5.08□□□□□ -1.6
LRRC39-204ENST00000620882 CHPFQ8IZ52 775 aa5.08□□□□□ -1.6
LRRC39-204ENST00000620882 AHI1Q8N157 1196 aa5.08□□□□□ -1.6
LRRC39-204ENST00000620882 IGSF22Q8N9C0 903 aa5.08□□□□□ -1.6
LRRC39-204ENST00000620882 RNF141Q8WVD5 230 aa5.08□□□□□ -1.6
LRRC39-204ENST00000620882 COPS5Q92905 334 aa5.08□□□□□ -1.6
LRRC39-204ENST00000620882 WNK4Q96J92 1243 aa5.08□□□□□ -1.6
LRRC39-204ENST00000620882 RPS6KC1Q96S38 1066 aa5.08□□□□□ -1.6
LRRC39-204ENST00000620882 IFT22Q9H7X7 185 aa5.08□□□□□ -1.6
LRRC39-204ENST00000620882 CYP26B1Q9NR63 512 aa5.08□□□□□ -1.6
LRRC39-204ENST00000620882 WDR64B1ANS9 1081 aa5.07□□□□□ -1.6
LRRC39-204ENST00000620882 TRAF5O00463 557 aa5.07□□□□□ -1.6
LRRC39-204ENST00000620882 HOXC12P31275 282 aa5.07□□□□□ -1.6
LRRC39-204ENST00000620882 SGO2Q562F6 1265 aa5.07□□□□□ -1.6
LRRC39-204ENST00000620882 SYCP2LQ5T4T6 812 aa5.07□□□□□ -1.6
LRRC39-204ENST00000620882 MBLAC2Q68D91 279 aa5.07□□□□□ -1.6
LRRC39-204ENST00000620882 TPH2Q8IWU9 490 aa5.07□□□□□ -1.6
LRRC39-204ENST00000620882 PPIL6Q8IXY8 311 aa5.07□□□□□ -1.6
LRRC39-204ENST00000620882 SMC1BQ8NDV3 1235 aa5.07□□□□□ -1.6
LRRC39-204ENST00000620882 USP7Q93009 1102 aa5.07□□□□□ -1.6
LRRC39-204ENST00000620882 GPR101Q96P66 508 aaPredicted RBP5.07□□□□□ -1.6
LRRC39-204ENST00000620882 PHF20Q9BVI0 1012 aa5.07□□□□□ -1.6
LRRC39-204ENST00000620882 PLVAPQ9BX97 442 aa5.07□□□□□ -1.6
LRRC39-204ENST00000620882 SPTLC3Q9NUV7 552 aa5.07□□□□□ -1.6
LRRC39-204ENST00000620882 PCOLCE2Q9UKZ9 415 aa5.07□□□□□ -1.6
LRRC39-204ENST00000620882 A0A087WZG4 1122 aa5.07□□□□□ -1.6
LRRC39-204ENST00000620882 F8W735 103 aaPredicted RBP5.07□□□□□ -1.6
LRRC39-204ENST00000620882 BRINP1O60477 761 aa5.07□□□□□ -1.6
LRRC39-204ENST00000620882 ABLIM3O94929 683 aa5.07□□□□□ -1.6
LRRC39-204ENST00000620882 NPTXRO95502 500 aa5.07□□□□□ -1.6
LRRC39-204ENST00000620882 F2P00734 622 aa5.07□□□□□ -1.6
LRRC39-204ENST00000620882 CKMP06732 381 aa5.07□□□□□ -1.6
LRRC39-204ENST00000620882 RNF4P78317 190 aa5.07□□□□□ -1.6
LRRC39-204ENST00000620882 AMPD2Q01433 879 aa5.07□□□□□ -1.6
LRRC39-204ENST00000620882 GRB10Q13322 594 aa5.07□□□□□ -1.6
LRRC39-204ENST00000620882 TCIRG1Q13488 830 aa5.07□□□□□ -1.6
LRRC39-204ENST00000620882 UBE4AQ14139 1066 aa5.07□□□□□ -1.6
LRRC39-204ENST00000620882 GORABQ5T7V8 394 aa5.07□□□□□ -1.6
LRRC39-204ENST00000620882 SEZ6L2Q6UXD5 910 aa5.07□□□□□ -1.6
LRRC39-204ENST00000620882 MTDHQ86UE4 582 aaKnown RBP5.07□□□□□ -1.6
LRRC39-204ENST00000620882 NPAS3Q8IXF0 933 aa5.07□□□□□ -1.6
LRRC39-204ENST00000620882 DTWD2Q8NBA8 298 aa5.07□□□□□ -1.6
LRRC39-204ENST00000620882 NPLOC4Q8TAT6 608 aa5.07□□□□□ -1.6
LRRC39-204ENST00000620882 CHMP4CQ96CF2 233 aa5.07□□□□□ -1.6
LRRC39-204ENST00000620882 UBL7Q96S82 380 aaPredicted RBP5.07□□□□□ -1.6
LRRC39-204ENST00000620882 SPOCK3Q9BQ16 436 aa5.07□□□□□ -1.6
LRRC39-204ENST00000620882 RRAGCQ9HB90 399 aa5.07□□□□□ -1.6
LRRC39-204ENST00000620882 ARNT2Q9HBZ2 717 aa5.07□□□□□ -1.6
LRRC39-204ENST00000620882 PRDM10Q9NQV6 1147 aa5.07□□□□□ -1.6
LRRC39-204ENST00000620882 FBXL7Q9UJT9 491 aa5.07□□□□□ -1.6
LRRC39-204ENST00000620882 ZNF180Q9UJW8 692 aa5.07□□□□□ -1.6
LRRC39-204ENST00000620882 FZD9O00144 591 aa5.06□□□□□ -1.6
LRRC39-204ENST00000620882 CBX4O00257 560 aa5.06□□□□□ -1.6
LRRC39-204ENST00000620882 CD3EP07766 207 aa5.06□□□□□ -1.6
LRRC39-204ENST00000620882 SRGAP2CP0DJJ0 459 aa5.06□□□□□ -1.6
LRRC39-204ENST00000620882 PYGMP11217 842 aa5.06□□□□□ -1.6
LRRC39-204ENST00000620882 YBX3P16989 372 aaKnown RBP eCLIP5.06□□□□□ -1.6
LRRC39-204ENST00000620882 ERVK-21P61565 698 aa5.06□□□□□ -1.6
LRRC39-204ENST00000620882 PTPN21Q16825 1174 aa5.06□□□□□ -1.6
LRRC39-204ENST00000620882 LINC00114Q6XXX2 140 aa5.06□□□□□ -1.6
LRRC39-204ENST00000620882 ZBTB46Q86UZ6 589 aa5.06□□□□□ -1.6
LRRC39-204ENST00000620882 TIFAQ96CG3 184 aa5.06□□□□□ -1.6
LRRC39-204ENST00000620882 DSCC1Q9BVC3 393 aa5.06□□□□□ -1.6
LRRC39-204ENST00000620882 ASPNQ9BXN1 380 aa5.06□□□□□ -1.6
LRRC39-204ENST00000620882 PUS7LQ9H0K6 701 aaKnown RBP5.06□□□□□ -1.6
LRRC39-204ENST00000620882 MS4A5Q9H3V2 200 aa5.06□□□□□ -1.6
LRRC39-204ENST00000620882 EMC7Q9NPA0 242 aa5.06□□□□□ -1.6
LRRC39-204ENST00000620882 PPARGC1AQ9UBK2 798 aaKnown RBP5.06□□□□□ -1.6
LRRC39-204ENST00000620882 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.05□□□□□ -1.6
LRRC39-204ENST00000620882 WASH4PA8MWX3 477 aa5.05□□□□□ -1.6
LRRC39-204ENST00000620882 ARVCFO00192 962 aa5.05□□□□□ -1.6
LRRC39-204ENST00000620882 TERTO14746 1132 aaKnown RBP5.05□□□□□ -1.6
LRRC39-204ENST00000620882 SIGLEC6O43699 453 aa5.05□□□□□ -1.6
LRRC39-204ENST00000620882 FKBP9O95302 570 aa5.05□□□□□ -1.6
LRRC39-204ENST00000620882 MT-CO1P00395 513 aa5.05□□□□□ -1.6
LRRC39-204ENST00000620882 CPEP16870 476 aa5.05□□□□□ -1.6
LRRC39-204ENST00000620882 BIRC2Q13490 618 aa5.05□□□□□ -1.6
LRRC39-204ENST00000620882 CREB3L3Q68CJ9 461 aa5.05□□□□□ -1.6
LRRC39-204ENST00000620882 IGF2-ASQ6U949 168 aa5.05□□□□□ -1.6
LRRC39-204ENST00000620882 FKBP9P1Q75LS8 142 aa5.05□□□□□ -1.6
LRRC39-204ENST00000620882 PODNQ7Z5L7 613 aa5.05□□□□□ -1.6
LRRC39-204ENST00000620882 CRACR2BQ8N4Y2 399 aaPredicted RBP5.05□□□□□ -1.6
LRRC39-204ENST00000620882 TOP6BLQ8N6T0 577 aa5.05□□□□□ -1.6
LRRC39-204ENST00000620882 PCDH19Q8TAB3 1148 aa5.05□□□□□ -1.6
LRRC39-204ENST00000620882 MORC4Q8TE76 937 aa5.05□□□□□ -1.6
LRRC39-204ENST00000620882 CHTF18Q8WVB6 975 aa5.05□□□□□ -1.6
LRRC39-204ENST00000620882 JPH3Q8WXH2 748 aaPredicted RBP5.05□□□□□ -1.6
LRRC39-204ENST00000620882 FCRL3Q96P31 734 aaPredicted RBP5.05□□□□□ -1.6
LRRC39-204ENST00000620882 MRPL18Q9H0U6 180 aaKnown RBP5.05□□□□□ -1.6
LRRC39-204ENST00000620882 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.05□□□□□ -1.6
LRRC39-204ENST00000620882 C1GALT1Q9NS00 363 aa5.05□□□□□ -1.6
LRRC39-204ENST00000620882 THG1LQ9NWX6 298 aaKnown RBP5.05□□□□□ -1.6
LRRC39-204ENST00000620882 IP6K2Q9UHH9 426 aa5.05□□□□□ -1.6
LRRC39-204ENST00000620882 DIS3Q9Y2L1 958 aaKnown RBP5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms