RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 DEXIO95424 95 aa7.82□□□□□ -1.16
COLCA1-205ENST00000620864 OR9Q1Q8NGQ5 310 aa7.82□□□□□ -1.16
COLCA1-205ENST00000620864 XAGE3Q8WTP9 111 aa7.82□□□□□ -1.16
COLCA1-205ENST00000620864 TMEM87BQ96K49 555 aa7.82□□□□□ -1.16
COLCA1-205ENST00000620864 NDE1Q9NXR1 346 aa7.82□□□□□ -1.16
COLCA1-205ENST00000620864 KRIT1O00522 736 aa7.82□□□□□ -1.16
COLCA1-205ENST00000620864 ATXN8OSP0DMR3 200 aa7.82□□□□□ -1.16
COLCA1-205ENST00000620864 RANBP1P43487 201 aa7.82□□□□□ -1.16
COLCA1-205ENST00000620864 FAM47CQ5HY64 1035 aa7.82□□□□□ -1.16
COLCA1-205ENST00000620864 C9orf131Q5VYM1 1079 aa7.82□□□□□ -1.16
COLCA1-205ENST00000620864 NXNQ6DKJ4 435 aa7.82□□□□□ -1.16
COLCA1-205ENST00000620864 ARL10Q8N8L6 244 aa7.82□□□□□ -1.16
COLCA1-205ENST00000620864 RAET1EQ8TD07 263 aa7.82□□□□□ -1.16
COLCA1-205ENST00000620864 S100BP04271 92 aaPredicted RBP7.81□□□□□ -1.16
COLCA1-205ENST00000620864 ETF1P62495 437 aaKnown RBP7.81□□□□□ -1.16
COLCA1-205ENST00000620864 HADHQ16836 314 aaKnown RBP7.81□□□□□ -1.16
COLCA1-205ENST00000620864 OR8K1Q8NGG5 319 aa7.81□□□□□ -1.16
COLCA1-205ENST00000620864 RHPN1Q8TCX5 695 aa7.81□□□□□ -1.16
COLCA1-205ENST00000620864 ITGB1BP2Q9UKP3 347 aa7.81□□□□□ -1.16
COLCA1-205ENST00000620864 CSADQ9Y600 493 aa7.81□□□□□ -1.16
COLCA1-205ENST00000620864 PTPDC1A2A3K4 754 aa7.81□□□□□ -1.16
COLCA1-205ENST00000620864 GSTA1P08263 222 aa7.81□□□□□ -1.16
COLCA1-205ENST00000620864 GSTA2P09210 222 aa7.81□□□□□ -1.16
COLCA1-205ENST00000620864 CCT5P48643 541 aa7.81□□□□□ -1.16
COLCA1-205ENST00000620864 CWF19L2Q2TBE0 894 aaKnown RBP7.81□□□□□ -1.16
COLCA1-205ENST00000620864 KLHL7Q8IXQ5 586 aa7.81□□□□□ -1.16
COLCA1-205ENST00000620864 RDH13Q8NBN7 331 aa7.81□□□□□ -1.16
COLCA1-205ENST00000620864 JPH2Q9BR39 696 aaPredicted RBP7.81□□□□□ -1.16
COLCA1-205ENST00000620864 ANKRD2Q9GZV1 360 aa7.81□□□□□ -1.16
COLCA1-205ENST00000620864 RAB20Q9NX57 234 aa7.81□□□□□ -1.16
COLCA1-205ENST00000620864 GGA1Q9UJY5 639 aa7.81□□□□□ -1.16
COLCA1-205ENST00000620864 ARHGDIAP52565 204 aa7.81□□□□□ -1.16
COLCA1-205ENST00000620864 DALRD3Q5D0E6 543 aaKnown RBP7.81□□□□□ -1.16
COLCA1-205ENST00000620864 RPRD2Q5VT52 1461 aaKnown RBP7.81□□□□□ -1.16
COLCA1-205ENST00000620864 ANKRD44Q8N8A2 993 aa7.81□□□□□ -1.16
COLCA1-205ENST00000620864 ANKRD42Q8N9B4 389 aa7.81□□□□□ -1.16
COLCA1-205ENST00000620864 SH2D4AQ9H788 454 aa7.81□□□□□ -1.16
COLCA1-205ENST00000620864 C10orf88Q9H8K7 445 aa7.81□□□□□ -1.16
COLCA1-205ENST00000620864 WDR97A6NE52 1622 aa7.81□□□□□ -1.16
COLCA1-205ENST00000620864 F8W8V4 182 aa7.81□□□□□ -1.16
COLCA1-205ENST00000620864 MAPK13O15264 365 aa7.81□□□□□ -1.16
COLCA1-205ENST00000620864 SPAG7O75391 227 aa7.81□□□□□ -1.16
COLCA1-205ENST00000620864 BLVRAP53004 296 aa7.81□□□□□ -1.16
COLCA1-205ENST00000620864 GABPAQ06546 454 aa7.81□□□□□ -1.16
COLCA1-205ENST00000620864 IFT88Q13099 833 aa7.81□□□□□ -1.16
COLCA1-205ENST00000620864 ANO1Q5XXA6 986 aa7.81□□□□□ -1.16
COLCA1-205ENST00000620864 TRIM11Q96F44 468 aa7.81□□□□□ -1.16
COLCA1-205ENST00000620864 CTTNBP2Q8WZ74 1663 aa7.81□□□□□ -1.16
COLCA1-205ENST00000620864 IPO5O00410 1097 aaKnown RBP7.81□□□□□ -1.16
COLCA1-205ENST00000620864 MCF2LO15068 1137 aa7.81□□□□□ -1.16
COLCA1-205ENST00000620864 DEAF1O75398 565 aaPredicted RBP7.81□□□□□ -1.16
COLCA1-205ENST00000620864 C4BPBP20851 252 aa7.81□□□□□ -1.16
COLCA1-205ENST00000620864 IL15P40933 162 aaPredicted RBP7.81□□□□□ -1.16
COLCA1-205ENST00000620864 PDE4DQ08499 809 aa7.81□□□□□ -1.16
COLCA1-205ENST00000620864 DRP2Q13474 957 aa7.81□□□□□ -1.16
COLCA1-205ENST00000620864 COPS6Q7L5N1 327 aa7.81□□□□□ -1.16
COLCA1-205ENST00000620864 DCAF5Q96JK2 942 aa7.81□□□□□ -1.16
COLCA1-205ENST00000620864 RNF181Q9P0P0 153 aa7.81□□□□□ -1.16
COLCA1-205ENST00000620864 IRS4O14654 1257 aaPredicted RBP7.81□□□□□ -1.16
COLCA1-205ENST00000620864 ATF2P15336 505 aa7.81□□□□□ -1.16
COLCA1-205ENST00000620864 EEF1B2P24534 225 aaKnown RBP7.81□□□□□ -1.16
COLCA1-205ENST00000620864 IFNA8P32881 189 aa7.81□□□□□ -1.16
COLCA1-205ENST00000620864 SNX1Q13596 522 aa7.81□□□□□ -1.16
COLCA1-205ENST00000620864 CBX8Q9HC52 389 aa7.81□□□□□ -1.16
COLCA1-205ENST00000620864 HELLSQ9NRZ9 838 aa7.81□□□□□ -1.16
COLCA1-205ENST00000620864 CFAP73A6NFT4 308 aa7.8□□□□□ -1.16
COLCA1-205ENST00000620864 ZBBXA8MT70 800 aa7.8□□□□□ -1.16
COLCA1-205ENST00000620864 NOP56O00567 594 aaKnown RBP7.8□□□□□ -1.16
COLCA1-205ENST00000620864 BIRC3Q13489 604 aa7.8□□□□□ -1.16
COLCA1-205ENST00000620864 C10orf76Q5T2E6 689 aa7.8□□□□□ -1.16
COLCA1-205ENST00000620864 DBNLQ9UJU6 430 aaKnown RBP7.8□□□□□ -1.16
COLCA1-205ENST00000620864 RASSF10A6NK89 507 aa7.8□□□□□ -1.16
COLCA1-205ENST00000620864 TPD52L2O43399 206 aaKnown RBP7.8□□□□□ -1.16
COLCA1-205ENST00000620864 DNM2P50570 870 aa7.8□□□□□ -1.16
COLCA1-205ENST00000620864 GRIN1Q05586 938 aa7.8□□□□□ -1.16
COLCA1-205ENST00000620864 NR1H3Q13133 447 aa7.8□□□□□ -1.16
COLCA1-205ENST00000620864 MTRQ99707 1265 aa7.8□□□□□ -1.16
COLCA1-205ENST00000620864 PEG3Q9GZU2 1588 aa7.8□□□□□ -1.16
COLCA1-205ENST00000620864 SRGAP2BP0DMP2 458 aa7.8□□□□□ -1.16
COLCA1-205ENST00000620864 STX17P56962 302 aa7.8□□□□□ -1.16
COLCA1-205ENST00000620864 MRPL28Q13084 256 aaKnown RBP7.8□□□□□ -1.16
COLCA1-205ENST00000620864 HSP90AA4PQ58FG1 418 aa7.8□□□□□ -1.16
COLCA1-205ENST00000620864 SESTD1Q86VW0 696 aa7.8□□□□□ -1.16
COLCA1-205ENST00000620864 MAGEF1Q9HAY2 307 aa7.8□□□□□ -1.16
COLCA1-205ENST00000620864 SNRKQ9NRH2 765 aa7.8□□□□□ -1.16
COLCA1-205ENST00000620864 TRPC6Q9Y210 931 aa7.8□□□□□ -1.16
COLCA1-205ENST00000620864 NEO1Q92859 1461 aa7.8□□□□□ -1.16
COLCA1-205ENST00000620864 KDM3AQ9Y4C1 1321 aa7.8□□□□□ -1.16
COLCA1-205ENST00000620864 FLCNQ8NFG4 579 aa7.8□□□□□ -1.16
COLCA1-205ENST00000620864 ZKSCAN4Q969J2 545 aaPredicted RBP7.8□□□□□ -1.16
COLCA1-205ENST00000620864 F6X3S4 739 aa7.8□□□□□ -1.16
COLCA1-205ENST00000620864 KDM1AO60341 852 aa7.8□□□□□ -1.16
COLCA1-205ENST00000620864 KRT75O95678 551 aa7.8□□□□□ -1.16
COLCA1-205ENST00000620864 ADCY8P40145 1251 aa7.8□□□□□ -1.16
COLCA1-205ENST00000620864 RINT1Q6NUQ1 792 aa7.8□□□□□ -1.16
COLCA1-205ENST00000620864 TEX9Q8N6V9 391 aa7.8□□□□□ -1.16
COLCA1-205ENST00000620864 MGARPQ8TDB4 240 aa7.8□□□□□ -1.16
COLCA1-205ENST00000620864 CACTINQ8WUQ7 758 aaKnown RBP7.8□□□□□ -1.16
COLCA1-205ENST00000620864 SNX5Q9Y5X3 404 aa7.8□□□□□ -1.16
COLCA1-205ENST00000620864 NUP160Q12769 1436 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms