RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 PCDHA1Q9Y5I3 950 aa15.78■□□□□ 0.12
NEK3-210ENST00000620675 PRPF3O43395 683 aaKnown RBP15.77■□□□□ 0.12
NEK3-210ENST00000620675 FMNL1O95466 1100 aaPredicted RBP15.77■□□□□ 0.12
NEK3-210ENST00000620675 FDX1P10109 184 aa15.77■□□□□ 0.12
NEK3-210ENST00000620675 MCM2P49736 904 aa15.77■□□□□ 0.12
NEK3-210ENST00000620675 LBX1P52954 281 aa15.77■□□□□ 0.12
NEK3-210ENST00000620675 OAZ1P54368 228 aa15.77■□□□□ 0.12
NEK3-210ENST00000620675 CLEC4DQ8WXI8 215 aa15.77■□□□□ 0.12
NEK3-210ENST00000620675 TRERF1Q96PN7 1200 aa15.77■□□□□ 0.12
NEK3-210ENST00000620675 RNF146Q9NTX7 359 aa15.77■□□□□ 0.12
NEK3-210ENST00000620675 K7ELQ4 463 aaPredicted RBP15.77■□□□□ 0.11
NEK3-210ENST00000620675 PSMC4P43686 418 aa15.77■□□□□ 0.11
NEK3-210ENST00000620675 FOSBP53539 338 aa15.77■□□□□ 0.11
NEK3-210ENST00000620675 SSRP1Q08945 709 aaKnown RBP15.77■□□□□ 0.11
NEK3-210ENST00000620675 HEATR3Q7Z4Q2 680 aa15.77■□□□□ 0.11
NEK3-210ENST00000620675 GPR142Q7Z601 462 aa15.77■□□□□ 0.11
NEK3-210ENST00000620675 PURBQ96QR8 312 aaKnown RBP15.77■□□□□ 0.11
NEK3-210ENST00000620675 AMNQ9BXJ7 453 aa15.77■□□□□ 0.11
NEK3-210ENST00000620675 RNF26Q9BY78 433 aaPredicted RBP15.77■□□□□ 0.11
NEK3-210ENST00000620675 FKTNO75072 461 aa15.76■□□□□ 0.11
NEK3-210ENST00000620675 PFKFB3Q16875 520 aaPredicted RBP15.76■□□□□ 0.11
NEK3-210ENST00000620675 ORC3Q9UBD5 711 aaPredicted RBP15.76■□□□□ 0.11
NEK3-210ENST00000620675 SEC63Q9UGP8 760 aaKnown RBP15.76■□□□□ 0.11
NEK3-210ENST00000620675 STXBP3O00186 592 aa15.75■□□□□ 0.11
NEK3-210ENST00000620675 SCG2P13521 617 aa15.75■□□□□ 0.11
NEK3-210ENST00000620675 CUL4AQ13619 759 aa15.75■□□□□ 0.11
NEK3-210ENST00000620675 SMARCC2Q8TAQ2 1214 aa15.75■□□□□ 0.11
NEK3-210ENST00000620675 VPS54Q9P1Q0 977 aa15.75■□□□□ 0.11
NEK3-210ENST00000620675 DDX49Q9Y6V7 483 aaKnown RBP15.75■□□□□ 0.11
NEK3-210ENST00000620675 SPRYD3Q8NCJ5 442 aa15.75■□□□□ 0.11
NEK3-210ENST00000620675 GABRQQ9UN88 632 aa15.75■□□□□ 0.11
NEK3-210ENST00000620675 PGK2P07205 417 aa15.74■□□□□ 0.11
NEK3-210ENST00000620675 CCNA1P78396 465 aa15.74■□□□□ 0.11
NEK3-210ENST00000620675 CPLX2Q6PUV4 134 aaKnown RBP15.74■□□□□ 0.11
NEK3-210ENST00000620675 A1CFQ9NQ94 594 aaKnown RBP15.74■□□□□ 0.11
NEK3-210ENST00000620675 MYH7BA7E2Y1 1941 aa15.74■□□□□ 0.11
NEK3-210ENST00000620675 SLC25A27O95847 323 aa15.74■□□□□ 0.11
NEK3-210ENST00000620675 NOM1Q5C9Z4 860 aaKnown RBP15.74■□□□□ 0.11
NEK3-210ENST00000620675 NSMFQ6X4W1 530 aa15.74■□□□□ 0.11
NEK3-210ENST00000620675 SLC30A10Q6XR72 485 aa15.74■□□□□ 0.11
NEK3-210ENST00000620675 HSCBQ8IWL3 235 aa15.74■□□□□ 0.11
NEK3-210ENST00000620675 TRIM22Q8IYM9 498 aa15.74■□□□□ 0.11
NEK3-210ENST00000620675 SHCBP1Q8NEM2 672 aa15.74■□□□□ 0.11
NEK3-210ENST00000620675 ACAD9Q9H845 621 aa15.74■□□□□ 0.11
NEK3-210ENST00000620675 BARHL2Q9NY43 387 aa15.74■□□□□ 0.11
NEK3-210ENST00000620675 COL20A1Q9P218 1284 aa15.74■□□□□ 0.11
NEK3-210ENST00000620675 STK36Q9NRP7 1315 aa15.73■□□□□ 0.11
NEK3-210ENST00000620675 ZNF236Q9UL36 1845 aa15.73■□□□□ 0.11
NEK3-210ENST00000620675 TNPO2O14787 897 aaKnown RBP15.73■□□□□ 0.11
NEK3-210ENST00000620675 CDKL5O76039 1030 aa15.73■□□□□ 0.11
NEK3-210ENST00000620675 DEXIO95424 95 aa15.73■□□□□ 0.11
NEK3-210ENST00000620675 MAPK4P31152 587 aa15.73■□□□□ 0.11
NEK3-210ENST00000620675 HOXA13P31271 388 aaPredicted RBP15.73■□□□□ 0.11
NEK3-210ENST00000620675 AKAP17AQ02040 695 aaKnown RBP15.73■□□□□ 0.11
NEK3-210ENST00000620675 CNTN2Q02246 1040 aa15.73■□□□□ 0.11
NEK3-210ENST00000620675 PLEKHH3Q7Z736 793 aa15.73■□□□□ 0.11
NEK3-210ENST00000620675 CCAR1Q8IX12 1150 aaKnown RBP15.73■□□□□ 0.11
NEK3-210ENST00000620675 IL27Q8NEV9 243 aa15.73■□□□□ 0.11
NEK3-210ENST00000620675 MROH8Q9H579 483 aa15.73■□□□□ 0.11
NEK3-210ENST00000620675 GJD2Q9UKL4 321 aa15.73■□□□□ 0.11
NEK3-210ENST00000620675 KCNJ14Q9UNX9 436 aa15.73■□□□□ 0.11
NEK3-210ENST00000620675 ASTN1O14525 1302 aa15.73■□□□□ 0.11
NEK3-210ENST00000620675 ABCB11O95342 1321 aa15.73■□□□□ 0.11
NEK3-210ENST00000620675 COBLO75128 1261 aa15.72■□□□□ 0.11
NEK3-210ENST00000620675 PTPREP23469 700 aa15.72■□□□□ 0.11
NEK3-210ENST00000620675 ADORA2AP29274 412 aa15.72■□□□□ 0.11
NEK3-210ENST00000620675 CTCFP49711 727 aaPredicted RBP15.72■□□□□ 0.11
NEK3-210ENST00000620675 NAPAP54920 295 aa15.72■□□□□ 0.11
NEK3-210ENST00000620675 PRKCZQ05513 592 aa15.72■□□□□ 0.11
NEK3-210ENST00000620675 BAATQ14032 418 aaPredicted RBP15.72■□□□□ 0.11
NEK3-210ENST00000620675 USP17L6PQ6QN14 398 aa15.72■□□□□ 0.11
NEK3-210ENST00000620675 CHST13Q8NET6 341 aa15.72■□□□□ 0.11
NEK3-210ENST00000620675 LLPHQ9BRT6 129 aaKnown RBP15.72■□□□□ 0.11
NEK3-210ENST00000620675 CFBP00751 764 aa15.72■□□□□ 0.11
NEK3-210ENST00000620675 FCGRTP55899 365 aa15.72■□□□□ 0.11
NEK3-210ENST00000620675 RPS6P62753 249 aaKnown RBP15.72■□□□□ 0.11
NEK3-210ENST00000620675 GRB14Q14449 540 aa15.72■□□□□ 0.11
NEK3-210ENST00000620675 UBE2SQ16763 222 aa15.72■□□□□ 0.11
NEK3-210ENST00000620675 MORN1Q5T089 497 aa15.72■□□□□ 0.11
NEK3-210ENST00000620675 FGD4Q96M96 766 aa15.72■□□□□ 0.11
NEK3-210ENST00000620675 MMP19Q99542 508 aa15.72■□□□□ 0.11
NEK3-210ENST00000620675 ALG1Q9BT22 464 aa15.72■□□□□ 0.11
NEK3-210ENST00000620675 CYP39A1Q9NYL5 469 aa15.72■□□□□ 0.11
NEK3-210ENST00000620675 KIAA1217Q5T5P2 1943 aa15.71■□□□□ 0.11
NEK3-210ENST00000620675 GJB2P29033 226 aa15.71■□□□□ 0.11
NEK3-210ENST00000620675 GUCY1B3Q02153 619 aa15.71■□□□□ 0.11
NEK3-210ENST00000620675 NPY5RQ15761 445 aa15.71■□□□□ 0.11
NEK3-210ENST00000620675 ANKRD35Q8N283 1001 aa15.71■□□□□ 0.11
NEK3-210ENST00000620675 CWC22Q9HCG8 908 aaKnown RBP15.71■□□□□ 0.11
NEK3-210ENST00000620675 MRPL11Q9Y3B7 192 aaKnown RBP15.71■□□□□ 0.11
NEK3-210ENST00000620675 DNAH12Q6ZR08 3092 aa15.71■□□□□ 0.11
NEK3-210ENST00000620675 MEIS2O14770 477 aa15.71■□□□□ 0.1
NEK3-210ENST00000620675 FCER1AP12319 257 aa15.71■□□□□ 0.1
NEK3-210ENST00000620675 CALML3P27482 149 aa15.71■□□□□ 0.1
NEK3-210ENST00000620675 TKFCQ3LXA3 575 aa15.71■□□□□ 0.1
NEK3-210ENST00000620675 OTOP1Q7RTM1 612 aa15.71■□□□□ 0.1
NEK3-210ENST00000620675 NPLOC4Q8TAT6 608 aa15.71■□□□□ 0.1
NEK3-210ENST00000620675 USP6NLQ92738 828 aa15.71■□□□□ 0.1
NEK3-210ENST00000620675 ERO1AQ96HE7 468 aa15.71■□□□□ 0.1
NEK3-210ENST00000620675 RBM19Q9Y4C8 960 aaKnown RBP15.71■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms