RNA–Protein interactions for RNA: ENST00000614198.4

GGA3-221, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 3,438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-221ENST00000614198 GOLGA5Q8TBA6 731 aa11.26□□□□□ -0.61
GGA3-221ENST00000614198 ZKSCAN4Q969J2 545 aaPredicted RBP11.26□□□□□ -0.61
GGA3-221ENST00000614198 ZBED3Q96IU2 234 aaPredicted RBP11.26□□□□□ -0.61
GGA3-221ENST00000614198 MAP3K14Q99558 947 aa11.26□□□□□ -0.61
GGA3-221ENST00000614198 DHX36Q9H2U1 1008 aaKnown RBP11.26□□□□□ -0.61
GGA3-221ENST00000614198 RBM28Q9NW13 759 aaKnown RBP11.26□□□□□ -0.61
GGA3-221ENST00000614198 PGAP2Q9UHJ9 254 aa11.26□□□□□ -0.61
GGA3-221ENST00000614198 TNIP1Q15025 636 aa11.25□□□□□ -0.61
GGA3-221ENST00000614198 STK38Q15208 465 aa11.25□□□□□ -0.61
GGA3-221ENST00000614198 PFKFB3Q16875 520 aaPredicted RBP11.25□□□□□ -0.61
GGA3-221ENST00000614198 KIF4BQ2VIQ3 1234 aa11.25□□□□□ -0.61
GGA3-221ENST00000614198 ANO1Q5XXA6 986 aa11.25□□□□□ -0.61
GGA3-221ENST00000614198 SRLQ86TD4 932 aa11.25□□□□□ -0.61
GGA3-221ENST00000614198 ADGRF4Q8IZF3 695 aa11.25□□□□□ -0.61
GGA3-221ENST00000614198 FAM151AQ8WW52 585 aa11.25□□□□□ -0.61
GGA3-221ENST00000614198 TEPSINQ96N21 525 aa11.25□□□□□ -0.61
GGA3-221ENST00000614198 MTA3Q9BTC8 594 aa11.25□□□□□ -0.61
GGA3-221ENST00000614198 SCAND2PQ9GZW5 306 aaPredicted RBP11.25□□□□□ -0.61
GGA3-221ENST00000614198 DEFB129Q9H1M3 183 aa11.25□□□□□ -0.61
GGA3-221ENST00000614198 MYO3BQ8WXR4 1341 aa11.25□□□□□ -0.61
GGA3-221ENST00000614198 STK36Q9NRP7 1315 aa11.25□□□□□ -0.61
GGA3-221ENST00000614198 CALM1P0DP23 149 aa11.25□□□□□ -0.61
GGA3-221ENST00000614198 CALM2P0DP24 149 aa11.25□□□□□ -0.61
GGA3-221ENST00000614198 CALM3P0DP25 149 aa11.25□□□□□ -0.61
GGA3-221ENST00000614198 CDC25AP30304 524 aa11.25□□□□□ -0.61
GGA3-221ENST00000614198 INPP5BP32019 993 aa11.25□□□□□ -0.61
GGA3-221ENST00000614198 PSEN1P49768 467 aa11.25□□□□□ -0.61
GGA3-221ENST00000614198 NDUFA8P51970 172 aa11.25□□□□□ -0.61
GGA3-221ENST00000614198 GJA10Q969M2 543 aa11.25□□□□□ -0.61
GGA3-221ENST00000614198 PSD3Q9NYI0 1048 aa11.25□□□□□ -0.61
GGA3-221ENST00000614198 RCOR1Q9UKL0 485 aa11.25□□□□□ -0.61
GGA3-221ENST00000614198 SBF1O95248 1867 aa11.25□□□□□ -0.61
GGA3-221ENST00000614198 F5H6K3 240 aa11.25□□□□□ -0.61
GGA3-221ENST00000614198 GUCY2CP25092 1073 aa11.25□□□□□ -0.61
GGA3-221ENST00000614198 GYS2P54840 703 aa11.25□□□□□ -0.61
GGA3-221ENST00000614198 FMR1Q06787 632 aaKnown RBP eCLIP11.25□□□□□ -0.61
GGA3-221ENST00000614198 KLRC3Q07444 240 aa11.25□□□□□ -0.61
GGA3-221ENST00000614198 IQUBQ8NA54 791 aa11.25□□□□□ -0.61
GGA3-221ENST00000614198 SWAP70Q9UH65 585 aa11.25□□□□□ -0.61
GGA3-221ENST00000614198 ENTPD3O75355 529 aa11.24□□□□□ -0.61
GGA3-221ENST00000614198 KIF5BP33176 963 aa11.24□□□□□ -0.61
GGA3-221ENST00000614198 GSDMDP57764 484 aa11.24□□□□□ -0.61
GGA3-221ENST00000614198 ISM2Q6H9L7 571 aa11.24□□□□□ -0.61
GGA3-221ENST00000614198 GOLGA6L1Q8N7Z2 621 aa11.24□□□□□ -0.61
GGA3-221ENST00000614198 UBXN4Q92575 508 aa11.24□□□□□ -0.61
GGA3-221ENST00000614198 EHD4Q9H223 541 aa11.24□□□□□ -0.61
GGA3-221ENST00000614198 JMJD4Q9H9V9 463 aa11.24□□□□□ -0.61
GGA3-221ENST00000614198 BIN2Q9UBW5 565 aaPredicted RBP11.24□□□□□ -0.61
GGA3-221ENST00000614198 CFAP45Q9UL16 551 aa11.24□□□□□ -0.61
GGA3-221ENST00000614198 SPTLC2O15270 562 aa11.24□□□□□ -0.61
GGA3-221ENST00000614198 MYO1BO43795 1136 aa11.24□□□□□ -0.61
GGA3-221ENST00000614198 PTPAQ15257 358 aa11.24□□□□□ -0.61
GGA3-221ENST00000614198 UBE2SQ16763 222 aa11.24□□□□□ -0.61
GGA3-221ENST00000614198 GRIPAP1Q4V328 841 aa11.24□□□□□ -0.61
GGA3-221ENST00000614198 C9orf131Q5VYM1 1079 aa11.24□□□□□ -0.61
GGA3-221ENST00000614198 NCAPGQ9BPX3 1015 aa11.24□□□□□ -0.61
GGA3-221ENST00000614198 FBXO28Q9NVF7 368 aa11.24□□□□□ -0.61
GGA3-221ENST00000614198 GGA3Q9NZ52 723 aa11.24□□□□□ -0.61
GGA3-221ENST00000614198 RRP15Q9Y3B9 282 aaKnown RBP11.24□□□□□ -0.61
GGA3-221ENST00000614198 STXBP3O00186 592 aa11.23□□□□□ -0.61
GGA3-221ENST00000614198 LMNB1P20700 586 aa11.23□□□□□ -0.61
GGA3-221ENST00000614198 OAS2P29728 719 aaKnown RBP11.23□□□□□ -0.61
GGA3-221ENST00000614198 SLC1A4P43007 532 aa11.23□□□□□ -0.61
GGA3-221ENST00000614198 NOVP48745 357 aa11.23□□□□□ -0.61
GGA3-221ENST00000614198 IKQ13123 557 aaPredicted RBP11.23□□□□□ -0.61
GGA3-221ENST00000614198 USH1GQ495M9 461 aa11.23□□□□□ -0.61
GGA3-221ENST00000614198 FOXP4Q8IVH2 680 aaPredicted RBP11.23□□□□□ -0.61
GGA3-221ENST00000614198 MYCBPQ99417 103 aaPredicted RBP11.23□□□□□ -0.61
GGA3-221ENST00000614198 RTEL1Q9NZ71 1219 aa11.23□□□□□ -0.61
GGA3-221ENST00000614198 ATRNL1Q5VV63 1379 aa11.23□□□□□ -0.61
GGA3-221ENST00000614198 NDUFB10O96000 172 aa11.23□□□□□ -0.61
GGA3-221ENST00000614198 TPM1P09493 284 aa11.23□□□□□ -0.61
GGA3-221ENST00000614198 MCM7P33993 719 aa11.23□□□□□ -0.61
GGA3-221ENST00000614198 ZNF543Q08ER8 600 aa11.23□□□□□ -0.61
GGA3-221ENST00000614198 JAKMIP3Q5VZ66 844 aa11.23□□□□□ -0.61
GGA3-221ENST00000614198 E4F1Q66K89 784 aaPredicted RBP11.23□□□□□ -0.61
GGA3-221ENST00000614198 SLFN13Q68D06 897 aa11.23□□□□□ -0.61
GGA3-221ENST00000614198 CCDC73Q6ZRK6 1079 aa11.23□□□□□ -0.61
GGA3-221ENST00000614198 FSIP1Q8NA03 581 aa11.23□□□□□ -0.61
GGA3-221ENST00000614198 EXOC4Q96A65 974 aa11.23□□□□□ -0.61
GGA3-221ENST00000614198 PPP1R13BQ96KQ4 1090 aa11.23□□□□□ -0.61
GGA3-221ENST00000614198 SDF4Q9BRK5 362 aa11.23□□□□□ -0.61
GGA3-221ENST00000614198 PEX10O60683 326 aa11.23□□□□□ -0.61
GGA3-221ENST00000614198 KRT2P35908 639 aa11.23□□□□□ -0.61
GGA3-221ENST00000614198 ZNF280AP59817 542 aaPredicted RBP11.23□□□□□ -0.61
GGA3-221ENST00000614198 MOB2Q70IA6 237 aa11.23□□□□□ -0.61
GGA3-221ENST00000614198 REXO1L1PQ8IX06 675 aa11.23□□□□□ -0.61
GGA3-221ENST00000614198 TNFRSF25Q93038 417 aa11.23□□□□□ -0.61
GGA3-221ENST00000614198 ZCCHC17Q9NP64 241 aaKnown RBP11.23□□□□□ -0.61
GGA3-221ENST00000614198 ARFGEF1Q9Y6D6 1849 aa11.23□□□□□ -0.61
GGA3-221ENST00000614198 TMEM232C9JQI7 657 aa11.22□□□□□ -0.61
GGA3-221ENST00000614198 FOXN1O15353 648 aa11.22□□□□□ -0.61
GGA3-221ENST00000614198 KCNJ6P48051 423 aa11.22□□□□□ -0.61
GGA3-221ENST00000614198 NAPAP54920 295 aa11.22□□□□□ -0.61
GGA3-221ENST00000614198 SMC1AQ14683 1233 aaKnown RBP11.22□□□□□ -0.61
GGA3-221ENST00000614198 SKIDA1Q1XH10 827 aa11.22□□□□□ -0.61
GGA3-221ENST00000614198 INF2Q27J81 1249 aa11.22□□□□□ -0.61
GGA3-221ENST00000614198 AXDND1Q5T1B0 1012 aaPredicted RBP11.22□□□□□ -0.61
GGA3-221ENST00000614198 SHC4Q6S5L8 630 aa11.22□□□□□ -0.61
GGA3-221ENST00000614198 PDILTQ8N807 584 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms